Caloenas nicobarica (Nicobar pigeon): 136000325
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Entry
136000325 CDS
T11056
Symbol
SART1
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136000325 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
136000325 (SART1)
04121 Ubiquitin system [BR:
cnic04121
]
136000325 (SART1)
Spliceosome [BR:
cnic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
136000325 (SART1)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136000325 (SART1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
136000325
NCBI-ProteinID:
XP_065510176
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Position
32:complement(167380..185068)
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AA seq
785 aa
AA seq
DB search
MGSSKKHRERGGAEAAEEAPAAAGAAAGGGGSAGRPREHRKHRHRGGERRGKRSRSRGER
SGGGGSGSRRGGPEEPGRGGHGRGGAESERRTKRERREEREENAATPKTGESSLSVEETN
KLRAKLGLKPLEPPPLGKKESGTKDDPVAADAVNPLILRQREEIREKLAAAKXKRLLNQK
LGKVKTLGEDDPWLDDAAAWIERSRKLQREKELADKRAKLLEEMDQEFGVSTLVEEEFMK
RKMERYSARDLQGLTVEHDPGAFREGETLVLTLKDKGVLEEAEDVLVNVTLQAQAQAELR
RPKPPHAPYDADPAAPQKAHELLPKYADPPPPPSFRLGPGGAGTGGPAGGGGDSGDPPGP
APQSLELPLPRLAAEYLTPEEMEKFRPRRRRVKRLRRKEKEKPLRADDLVPTAPGDTSGD
FGSRTRGRGRRQEGEGQGEEGEEPPGPSPPPGAPPPPPSDDTRVENMDMSSDDDAAPPGS
PPQLLEDDAEQELQLQLERSRRLRQRQQTGGGKVLELVGGSGGAPGGPDPRGGGTIVFNA
TSEFCRTLGEIPTYGMAGNRGEHEDMMALERSARPSXPPGAPDSDGEENVGWSSVNLAEE
RQLQDLSAASTTILDEEPIVNRGLAAALMLCQNKGLLETTVQKVPRVKAPNKSLPSAVYC
IEDKMAMEDKLGRPEFRGFAQEFRDKDGYRPDVKIEYVDETGRKLSPKEAFRQLSHRFHG
KGSGKMKTERRMKKLDEEALLKRMSSSDTPLGTVALLQEKQRAQKTPFIVLSGGGKSMNA
NTITK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcgaagaagcaccgagagcgcggcggggccgaagcggccgaggaggcgccg
gcggcggcgggagcggccgccgggggaggcggctccgcggggcggccccgggagcaccgg
aagcaccggcaccgcggcggggagcggcgggggaagcgcagccgctcccggggggagcga
agcggcggcggcggctccgggtcccggcgaggaggccccgaggagcccgggaggggcggc
catgggcgggggggcgcggagagcgagcggagaaccaagagggagcggcgggaggagcgg
gaggagaacgccgcgacccccaaaaccggcgaatcgtcgctcagcgtggaagaaaccaac
aaactccgcgccaaactggggctgaagccgctggagccgccgccgctcggcaaaaaagag
tcgggcaccaaggacgaccccgtggccgccgacgccgtcaaccccttgattttacgccag
cgcgaggaaatccgcgaaaaattggcggcggccaaangaaaacgacttttgaaccaaaag
ttggggaaggtgaagacgttgggggaggacgacccgtggttggacgacgcggccgcttgg
atcgagcgcagccggaaactgcagcgggagaaggagctggcggataagagggccaagcta
ctggaggagatggaccaggagttcggcgtcagcacgttggtggaggaggagttcatgaag
aggaagatggaacgttacagcgcgcgggacctgcaggggctgacggtggaacacgacccg
ggcgcctttcgcgagggggagacgctggtgctgacgctcaaggacaagggggtgctggag
gaggccgaggacgtcctggtgaacgtcaccctgcaggcgcaggcccaggccgagctgcgc
cgccccaaacccccccacgccccctacgacgccgaccccgccgccccccaaaaagcccac
gagttgctccccaaatacgccgacccccccccgcccccctcgttccgcttggggccgggg
ggggcgggcacgggggggccggcgggggggggaggggacagcggggacccccccggcccc
gccccccagagcctggagctgcccctcccccgcctggcggccgagtacctgacgcccgag
gagatggagaagttccggccgcggcggcgccgggtgaagcggctgcggcggaaggagaag
gagaaaccgcttcgggccgacgacttggtgcccacggcgcccggggacacgagcggggac
ttcgggtccaggacccgcgggcgggggcggcgccaggagggggaggggcagggggaggag
ggggaggagccgcccggcccctccccccccccgggggcacccccaccccccccctcggac
gacacccgagtggagaacatggacatgagcagcgacgatgacgccgcccccccggggtcc
cccccccagctgctggaggacgacgcggagcaggagctgcagctgcaactggagcggagc
cgccggctgaggcagaggcagcaaacgggggggggcaaggtgctggagctggtcggcggc
tccgggggggccccgggggggcccgatccccgcgggggggggacgatcgtgttcaacgcg
acctccgagttctgccgcacgctgggggagatcccgacgtacggcatggccgggaaccgc
ggcgagcacgaggacatgatggccctggagcgctcggcccgtccgtccncccccccgggt
gcccccgactcggacggggaggaaaacgtgggctggagcagcgtgaacctggcggaggag
cggcagctgcaggacctctcggctgcatccacgaccatcctggacgaggagcccattgtg
aaccgggggctggcggccgcgctcatgctgtgtcagaacaaggggctgctggagaccacg
gtgcagaaggtcccgcgggtgaaggcgccgaacaagtcgctgccgtcggccgtttattgt
atcgaggacaagatggccatggaggacaagctggggcgccccgagttccgcggcttcgcg
caggagttccgcgacaaggacggctaccggcctgacgtcaagatcgagtacgtggacgag
accggccgcaagctcagccccaaggaggcgttccggcagctctctcaccgcttccacggc
aaaggctccgggaagatgaagacggagcgcaggatgaagaagctggacgaggaggcgctg
ctgaagcgcatgagctccagcgacacgccgctggggacggtcgcgctgctgcaggagaag
cagcgggcgcagaaaaccccgttcatcgtgctcagcggcggcggcaagagcatgaacgcg
aacacgatcaccaagtga
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