Caloenas nicobarica (Nicobar pigeon): 136000400
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Entry
136000400 CDS
T11056
Symbol
ITGB7
Name
(RefSeq) integrin beta-7
KO
K06590
integrin beta 7
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04510
Focal adhesion
cnic04512
ECM-receptor interaction
cnic04514
Cell adhesion molecule (CAM) interaction
cnic04672
Intestinal immune network for IgA production
cnic04810
Regulation of actin cytoskeleton
cnic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136000400 (ITGB7)
04514 Cell adhesion molecule (CAM) interaction
136000400 (ITGB7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136000400 (ITGB7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
136000400 (ITGB7)
04810 Regulation of actin cytoskeleton
136000400 (ITGB7)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
136000400 (ITGB7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
136000400 (ITGB7)
04515 Cell adhesion molecules [BR:
cnic04515
]
136000400 (ITGB7)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136000400 (ITGB7)
Cell adhesion molecules [BR:
cnic04515
]
Integrins
Integrin beta subunits
136000400 (ITGB7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
PSI_integrin
Integrin_b_cyt
I-EGF_1
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
136000400
NCBI-ProteinID:
XP_065510251
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All DBs
Position
33:222405..229118
Genome browser
AA seq
748 aa
AA seq
DB search
MGRPGGLLLLPLLLAAPGGAGTGSCEPQATCEACVRSHPRCAWCEDPEFPRGGQADTPRC
APREALERAGCPPRAVVQPRGSVRVLRDREPGGGPGGPTQLSPQHVQMQLRPGEERSFQV
RFRRAAGGPVDLYYLLDLSYSMRDDLGTLRRLARDILGTLRNVTPSVRIGFGSFVDKPVL
PYVSTVPSKLRNPCPERGEPCDPPRAFRHLLSLTGDPELFAERVGHQRVSGNLDPAEGGF
DAIMQVALCQERIGWRPVTRLLLFASDDTFHTAGDGKLGGIVTPCDTRCHLDASGVYSKS
HLYDYPSVGHLAQVLSAANIQPIFAVTGPNVPIYRELSRLIPKSVVGELRDDSSNVVQLI
ADAYSSLLSTVELQHSPLPPGISLSYEAHCGGPPGPPRPHGGSCTGVRVNQEVTFTVRVR
AGACLVSPQRVTLRALGVPEELALELGTLCGCPCAQSPPRSALCHGGTLLCGLCRCPGGR
RGRRCECAEEAGPGGAGGGCPPNSTGAPCSGACERHQGLPCGGPERGECVCGTCRCHPGF
GGSACGCPQGGGRCLRGGRECSGHGSCVCGTCRCHPGYEGPFCARCPSCHQPCWRLRDCA
DCRAFGRGPLRGNCSQACPRVTAWGVPAPPPDPQAWCRQETPDGRVLLFLIEGGPWGDEW
DEEREVTLLVWAEDGPAGVSPALVAALVAAPMALGLVALGVARVALELRDRRESRRFQRE
QVTVPCPRNNPLFRSATSTTANPGYCPN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggggcggccgggggggctcctgctgctgccgctgctgctggcggccccggggggggcc
gggacagggtcctgcgagccccaggccacctgcgaggcgtgtgtgcgctcccacccgcga
tgcgcctggtgcgaggacccggagttcccgcggggggggcaggcagacaccccccgctgc
gccccccgggaggccctggagcgcgccgggtgccccccccgcgccgtggtgcagccccgg
ggcagcgtgcgggtcctgcgggaccgggagccggggggggggccgggggggcccacccag
ctcagcccccagcacgtccagatgcagctgcggcccggggaggagcgcagcttccaggtg
cggttccggcgggcggcggggggccccgtggatctctactacctgctggacctgtcctac
tccatgcgggacgacctggggacgctgcggcgcctggcgagggacatcctggggaccctg
cgcaacgtcaccccctccgtccgcatcggtttcgggtcgtttgtggacaagccggtgctg
ccctatgtcagcacggtgccctccaagctgcgcaacccctgcccggaacggggggagccc
tgcgacccgccccgtgccttccgccacctcctgtccctcaccggggaccccgagttgttc
gccgagcgcgtcgggcaccagcgcgtgtccggaaacctggacccggcggagggcgggttc
gacgccatcatgcaggtggccctgtgccaggagcgcatcggctggcgcccggtcacccgc
ctgctgctcttcgcctcggacgacacgttccacacggcgggggacggcaaactgggcggc
atcgtcaccccctgcgacacccgctgccacctcgacgccagcggcgtctactccaaaagc
cacctctatgattacccctcggtgggacacttggcccaggtgctctcggccgccaacatc
cagcccatcttcgccgtgaccggtcccaacgtccccatctaccgggagctgagccgcctg
atccccaagtcagtggtgggggagctgcgggacgactccagcaacgtggtgcagctcatt
gcagacgcctacagtagcctcttgtccacggtggagctgcagcactcgccgctgcccccc
gggatcagcctcagctacgaggcgcattgcgggggcccccccggccccccccggccccac
ggtggctcctgcaccggcgtccgcgtcaaccaagaggtgacgttcacggtgcgggtgcgc
gcgggcgcctgcctggtgtccccgcagcgggtgaccctgcgggcactgggggtccccgag
gagctggcgctggagctggggacactgtgcgggtgtccctgcgcccagagccccccccgc
agcgcgctgtgccacggcgggaccctcctctgcgggctctgcaggtgtccgggggggcgc
cggggccgccgctgcgagtgcgcggaggaggcggggccggggggggccgggggcggctgc
ccccccaacagcaccggcgccccctgcagcggcgcctgcgagcgccaccaggggctgccc
tgcggaggcccggagcggggcgagtgcgtgtgcgggacgtgccgctgtcacccggggttc
gggggcagtgcgtgcgggtgtccccagggcggggggcgctgcctgcggggggggcgcgag
tgcagcggccacgggagctgcgtgtgcgggacctgccgctgccaccccggctacgaggga
cccttctgcgcccgctgtccctcctgtcaccagccctgctggcgcctccgggactgcgcc
gactgcagggccttcgggcgggggccgctgcgggggaactgcagccaggcctgtccccgc
gtcaccgcctggggggtccccgcgccccccccggacccccaggcctggtgccgccaggag
accccagacgggcgtgtcctcctcttcctcatcgagggggggccctggggggacgagtgg
gatgaggagcgggaggtgacactgctggtctgggctgaggacgggcccgcgggggtgtcc
ccagcgctggtggccgcgctggtggccgcgccgatggcgctggggctggtggcgctgggg
gtggcgcgggtggccctggagctgcgcgaccgccgcgagtcccggcgcttccagcgggaa
caggtgactgtcccatgtccccgtaacaacccgctcttcagaagcgccaccagcaccacg
gccaaccccgggtactgtcccaactga
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