Caloenas nicobarica (Nicobar pigeon): 136000564
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Entry
136000564 CDS
T11056
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00260
Glycine, serine and threonine metabolism
cnic00630
Glyoxylate and dicarboxylate metabolism
cnic00670
One carbon pool by folate
cnic01100
Metabolic pathways
cnic01200
Carbon metabolism
cnic01230
Biosynthesis of amino acids
cnic01240
Biosynthesis of cofactors
cnic04981
Folate transport and metabolism
Module
cnic_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
136000564 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
136000564 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
136000564 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
136000564 (SHMT2)
Enzymes [BR:
cnic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
136000564 (SHMT2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
136000564
NCBI-ProteinID:
XP_065510526
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Position
33:1686139..1691449
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AA seq
507 aa
AA seq
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MWPLRLGTALQRCGGRVATVGQRAQHGSAAAAATSHTPRWTGQESLAESDPEMWTLVQKE
KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRA
LEAFDLDPACWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDVKRV
SATSIFFESMPYKLNPATGLIDYDQLEMTARLFRPRLIIAGTSAYARLIDYARMKKVCEE
VKAYLLADMAHVSGLVAAKAIPSPFEHADLVTSTTHKTLRGARAGLIFYRKGVRSVDKKT
GKETLYDLEDRINFAVFPSLQGGPHNHAIAAVAVALKQANSPAFRQYCQQVLKNARAMAQ
ALLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITTNKNTCPGDKSALTPGG
LRLGAPALTSRHFCEEDFHKVVAFIDEGIALALDVKSKTTAPPPPGKLQDFKTFLLQDAE
TQQRLAELRQRVETFARAFPMPGFSDR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccgcctgggcacggccctgcagcgatgtggtggccgcgtggccaccgtg
ggccagcgggcacagcacggctccgcggcggccgccgccaccagccacacgccccgctgg
acggggcaggagagtttggccgagagcgaccccgagatgtggacgctggtgcagaaggag
aaggatcggcagtgccgggggctggagctcatcgcctcggagaatttctgcagccgggca
gcactggaagctctgggttcctgcctcaacaacaagtactcggaggggtaccctggcaag
aggtactacgggggagccgaggtggtggaccagatcgagctgctgtgcgagcagcgggcg
ctggaggcattcgacttggatcccgcctgctggggcgtcaacgttcagccctactcgggg
tctccggccaactttgcagcctacacagccctgctgcagccccatgaccgcctgatgggg
ctggacctgcccgatgggggacacctcacgcacgggtacatgtcggatgtcaagagagtc
tcggcaacgtccatcttctttgagtcgatgccctacaaacttaatccagccacggggctg
attgactacgaccagctggagatgacagcgcggcttttccgtccccgtctcatcatcgcc
ggcaccagcgcgtacgcccgcctcatcgactacgcgcgcatgaagaaggtgtgcgaggag
gtgaaggcgtacctgctggcggacatggcgcatgtcagcgggctggtggcggccaaggcc
atcccttcgcccttcgagcatgcggacctggtcaccagcaccacgcacaagaccctgcgc
ggcgccagagcgggactgatcttctaccgcaagggcgtgcgctcggtggataagaagacg
ggcaaggagacgctgtacgacctggaggacaggatcaacttcgctgttttcccctccctg
caaggggggccccacaaccacgccatcgctgctgtggccgtggccctcaaacaggccaac
tcgccagctttccgccagtactgccagcaagtgctgaagaacgccagagccatggcgcag
gcgctgctgcagcgcggctacaccctggtgtcaggcggcaccgacaaccacctggtgctg
gtggacctgcggcccaagggcatcgacggcgcgcgggctgagcgggtgctggagctcgtc
tccatcaccaccaacaagaacacgtgcccgggggacaagagcgcgctcacgccggggggg
ctgcgcctgggagcccccgcgctgacctcccgccacttctgcgaggaggatttccacaaa
gtcgtggctttcatcgatgagggcatcgcgctggccctggacgtcaagagcaaaaccact
gcccctccacccccagggaagctccaggacttcaagaccttcttgctgcaggatgcggag
acgcagcagcgcttggctgagctgcgccagcgcgtggaaaccttcgctcgtgccttcccc
atgcccggcttcagcgaccgctga
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