KEGG   Caloenas nicobarica (Nicobar pigeon): 136000705
Entry
136000705         CDS       T11056                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    136000705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnic03400]
    136000705
DNA repair and recombination proteins [BR:cnic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     136000705
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT LIG3_BRCT BRCT_2
Other DBs
NCBI-GeneID: 136000705
NCBI-ProteinID: XP_065510714
LinkDB
Position
34:complement(73130..83868)
AA seq 572 aa
MAAMPELRFKRVVSVTSADPRHPAQNLLSPESGGRWRAGKAGEKRISAELELAGEGPIHS
IHIGNDGSAFVEVLVGKAAGGDFQVLLPTAAFLSPNESRAGAELGRVRLFGPQSLVRGVA
AGTWDRVRLVCSQPYCQTRPFGLAFVRLFSPPEDAPAGPSPPSRRLGPFRLREGGASPPR
PPGALFYCRPSPSAAPPPEAPPGPSFAAAALGGQAPKAAKRRPSPKSNGKAPKRARTPGS
PTRTPGSLSRTPGSLSRTPGSPTRTPGSPRSPGRTPGSPTRTPGSPRSPTRTPGSPTRTP
GSLTRTPGSPTRTPGSAVLGGVVLVLSGFQNPLRSQLRAAAAELGAAYSPDWTARSTHLV
AAFPRTPKAAAARSGGGFVLGPAWIWDCRRARRRLPETPYLLDGSASSGSEGEGPEEAPP
TARPARKAPPPPDPVTPVTSDPPGSDSGDDNDQSDGDDPYGGSTEENSEEEEEEEPIPPL
PDFFRDQSFFFHGDFPAGEGRLLRRYVVAFGGSVAPYMSDSVTHVVTAQECAPAFEEALE
LRPSLTFVRPHWLRLCGEQQRPLPAPPFAVRP
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggcggcgatgccggagcttcgcttcaaacgcgtcgtgtccgtaacgagcgcggatccg
cgccacccggcccagaacctgctgagcccggagagcggcggccgctggagggcgggaaag
gccggagagaagcggatcagcgccgagctggagctggcgggggaggggcccatccactcc
atccacatcggcaacgacggttccgccttcgtggaggttctggtgggaaaagcggccggc
ggcgacttccaggtgctgctgcccacggccgccttcctgtcgcccaatgagagccgggcg
ggggcggagcttgggcgggtgcggctcttcgggccccaatcgctggtgaggggcgtggcc
gccgggacctgggaccgcgtgcgattggtctgcagccaaccctactgccagacccgcccc
ttcggtctcgccttcgtccggctcttctcgccccccgaggatgcccccgccggcccctcc
ccccccagccgccgcctggggccgttccggctgcgagaggggggggcgagccccccccgc
ccccccggcgccctgttctactgccgcccctcccccagcgccgcccctccccccgaggcc
ccgcccggtcccagttttgccgccgctgccctcggaggccaggcccccaaggccgccaag
cgtcgcccgtcgcccaaaagcaacgggaaagcgcccaaaagggcccggacgcctgggtcc
cccacccggacgcctgggtccctttcccggacgcctgggtccctttcccggacgcctggg
tcccccacccggacgcctgggtcccccaggtcccccggccggacgccggggtcccccacc
cggacgcctgggtcccccaggtcccccacccggacgccggggtcccccacccggacgcct
gggtccctcacccggacgcctgggtcccccacccggacgccggggtccgcggtgctgggc
ggggtggtgctggtgctgagcgggttccagaaccccctgaggagccaattgcgagcggcc
gcggccgagctgggcgccgcctacagccccgattggacggcgcggagcacccacctggtg
gccgcgttcccgcgcacccccaaggccgcggccgctcgttccggggggggattcgtgctg
ggacccgcctggatctgggactgccggagagcgcggcgccgcctgcccgagacaccgtac
ctcctggatggctccgcctcttccggcagcgagggggaggggccggaggaagccccgccc
accgcccgccctgcccgcaaggcccctcccccgcccgaccccgtgacccccgtgacctct
gaccccccgggttccgattcgggcgacgacaacgaccaatcagacggggacgatccctac
ggaggctccaccgaggaaaacagcgaagaggaggaggaggaggagcccatcccccccctg
cccgattttttccgggaccaaagtttctttttccacggcgacttcccggcgggggagggg
cggctgctgcggcgctacgtggtggcgttcggggggtccgtggccccgtacatgagcgac
tcggtgacccacgtggtgacggcacaggagtgcgccccggccttcgaggaggcgctggag
ctccgcccctcgctgaccttcgtgcgcccccattggctgcggctgtgcggggagcagcag
cgccccctgccggccccgcccttcgccgtgcgcccgtga

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