KEGG   Caloenas nicobarica (Nicobar pigeon): 136000792
Entry
136000792         CDS       T11056                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    136000792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnic03400]
    136000792
DNA repair and recombination proteins [BR:cnic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     136000792
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT LIG3_BRCT BRCT_2
Other DBs
NCBI-GeneID: 136000792
NCBI-ProteinID: XP_065510829
LinkDB
Position
35:complement(61764..72526)
AA seq 576 aa
MAAMPELRFKRVVSVTSADPRHPAQNLLSPESGGRWRAGKAGEKRISAELELAGEGPIHS
IHIGNDGSAFVEVLVGKAAGGDFQVLLPTAAFLSPNESRAGAELGRVRLFGPQSLVRGVA
AGTWDRVRLVCSQPYCQTRPFGLAFVRLFSPPEDAPAGASPPSRRLGPFRLREGGASPPR
PPGALFYRRPSPSAAPPPEAPPGPSFAAAALGGHAPKAAKRRPSPKSNGKAPKRARTPGS
PTRTPGSLSRTPGSPGRTPGSSGGMSGSDARMPGSPTRTPGSPRSPARTPGSPARTPGSP
ARTPGSPTRTPGSLTRTPGSAVLGGVVLVLSGFQNPLRSQLRAAAAELGAAYSPDWTARS
THLVAAFPRTPKAAAARSGGGFVLGPAWIWDCRRARRRLPETPYLLDGSASSGSEGEGPE
EAPPTARPARKAPPPPDPVTPVTSDPPGSDSGDDNDQSDGDDPYGGSTEENSEEEEEEEP
IRPLPDFFRDQSFFFHGDFPAGEGRLLRRYVVAFGGSVAPYMSDSVTHVVTAQECAPAFE
EALELRPSLTFVRPHWLRLCGEQQRPLPAPPFAVRP
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggcggcgatgccggagcttcgtttcaaacgcgtcgtgtccgtaacgagcgcggatccg
cgccacccggcccagaacctgctgagcccggagagcggcggccgctggagggcgggaaag
gccggagagaagcggatcagcgccgagctggagctggcgggggaggggcccatccactcc
atccacatcggcaacgacggttccgccttcgtggaggttctggtgggaaaagcggccggc
ggcgacttccaggtgctgctgcccacggccgccttcctgtcgcccaatgagagccgggcg
ggggcggagcttgggcgggtgcggctcttcgggccccaatcgctggtgaggggcgtggcc
gccgggacctgggaccgcgtgcgattggtctgcagccaaccctactgccagacccgcccc
tttggtctcgccttcgtccggctcttctcgccccccgaggacgcccccgccggcgcctcc
ccccccagccgccgcctggggccgttccggctgcgagaggggggggcgagccccccccgc
ccccccggcgccctgttctaccgccgcccctcccccagcgccgcccctccccccgaggcc
ccgcccggtcccagttttgctgccgctgccctcggaggccacgcccccaaggccgccaag
cgtcgcccgtcgcccaaaagcaacgggaaagcgcccaaaagggcccggacgcctgggtcc
cccacccggacgcctgggtccctttcccggacgcctgggtcccccggccggacgcctggg
tcctctggtgggatgtctggatctgatgcccggatgcctgggtcccccacccggacgcct
gggtcccccaggtcccccgcccggacgccggggtcccccgcccggacgccggggtccccc
gcccggacgccggggtcccccacccggacgcctgggtccctcacccggacgccggggtcc
gcggtgctgggcggggtggtgctggtgctgagcgggttccagaaccccctgaggagccaa
ctgcgagcggccgcggccgagctgggcgccgcctacagccccgattggacggcgcggagc
acccacctggtggccgcgttcccgcgcacccccaaggccgcggccgctcgttccgggggg
ggattcgtgctgggacccgcctggatctgggactgccggagagcgcggcgccgcctgccc
gagacaccgtacctcctggatggctccgcctcttccggcagcgagggggaggggccggag
gaagccccgcccaccgcccgccccgcccgcaaggcccctcccccacccgaccccgtgacc
cccgtgacctctgaccccccgggttccgattcgggcgacgacaacgaccaatcagacggg
gacgatccctacggaggctccaccgaggaaaacagcgaagaggaggaggaggaggagccc
atccgccccctgcccgattttttccgggaccaaagtttctttttccacggcgacttcccg
gcgggggaggggcggctgctgcggcgctacgtggtggcgttcggggggtccgtggccccg
tacatgagcgactcggtgacccacgtggtgacggcacaggagtgcgccccggccttcgag
gaggcgctggagctccgcccctcgctgaccttcgtgcgcccccattggctgcgactgtgc
ggggagcagcagcgccccctgccggccccgcccttcgccgtgcgcccgtga

DBGET integrated database retrieval system