Caloenas nicobarica (Nicobar pigeon): 136000814
Help
Entry
136000814 CDS
T11056
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03022
Basal transcription factors
cnic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136000814 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
136000814 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
136000814 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
cnic03400
]
136000814 (GTF2H4)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
136000814 (GTF2H4)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
136000814 (GTF2H4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
136000814
NCBI-ProteinID:
XP_065510873
LinkDB
All DBs
Position
35:complement(317393..323754)
Genome browser
AA seq
476 aa
AA seq
DB search
MAQRSSGGALRSPGGAMEGPAPRAPRAQLQCQNLHQFLRGLSPALLDRLYGHPAPCLAVF
RELPPLAQSLVLRLLFLELPLPQAALGLWVKKEHESAQTDSQEALQALRLLHPHTLPGGL
PGVALHPNFRLNLRVALLGGGSPWWDTTSPLGPDRHARDVRALDRYAEERWEVILHFMVG
SPSAAVSQDLAQLLVQAGLMRSEGGDAPCITSAGFQFLLLDTPAQLWYFILQYLQGAEAR
GMDLVEILSFLFQLSFSTLGKDYSTEAMSESLLTFLQHLREFGLVFQRKRKSRRFYPTRL
AIALASGTSGCPPEPDARGFVIVETNYRIYAYTDSELQVALIALFSELLYRFPNLVVAQV
TRDSVQAAIANGITADQIIHFLRTRAHPVMAKQSPVLPPTITDQIRLWELERDRLRFTEG
VLYNQFLSPGDFALLRDQARALGVLLFEHPARRLLVVTPGGHPDVRRFWKRQKHNG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcggtcctccggaggagccctgcggagcccagggggggccatggagggcccc
gccccgcgggcgccgcgcgcgcagctgcagtgccagaacctgcaccagttcctgcggggg
ctcagccccgccctgctcgaccggctctacgggcacccggcgccctgcctggcggtgttc
cgggagctgccccccctggcccagtcactggtgctgcggctgctgttcctggagctgccc
ctcccccaggcggcgctggggctctgggtgaagaaggagcacgagagtgcccagactgac
agccaggaggcgctgcaggccctgcggctcctgcacccccacacgctgcccggggggctc
ccgggggtcgctctgcaccccaacttccggctgaacctgcgcgtggccctgctggggggg
gggtccccgtggtgggacaccacgagcccgctgggccccgaccggcacgcgcgggacgtg
cgggcgctggatcgatatgccgaggagcgctgggaggtgatcctgcacttcatggtgggg
tcgcccagcgcggccgtgagccaggacctggcgcagctgctggtgcaggccgggctcatg
aggagcgaggggggggacgccccctgcatcacctcggccgggttccagttcctgctgctc
gacacccccgcccagctctggtatttcatcctccagtacctgcagggggcagaggcgcgg
gggatggacctggtggagattctgtccttcctgttccagctcagcttctccaccctgggc
aaggattactccaccgaggccatgagcgagtccctgctcaccttcctgcagcacctgcgc
gagttcgggctcgtcttccagaggaagcgcaagtcccgccggttctacccgacacgcttg
gccatcgcgctggcctcagggacatcggggtgtccccccgagcccgacgctcgcggcttc
gtcatcgtcgagaccaactaccgcatctatgcctacactgactcggagctgcaggtcgct
ctcatcgccctcttctccgagctgctctatcgcttccccaacctggtggtggcccaggtg
acaagggacagtgtccaggcagccatcgccaacggcatcaccgctgaccagatcattcac
ttcctgcgcacccgggcacaccctgtcatggccaagcagagcccggtgctgccgcccacc
atcacggaccagatccggctgtgggagctggagcgggaccggctgcgcttcaccgagggg
gtgctgtacaaccagttcctgtcccccggggacttcgcgctgctgcgggaccaggcgcgg
gcgctgggggttctgctgttcgagcacccggcgcggcggctgctggtggtgacgcccggg
ggacaccccgatgtccgacgcttctggaagaggcagaaacacaacgggtaa
DBGET
integrated database retrieval system
