Caloenas nicobarica (Nicobar pigeon): 136000902
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Entry
136000902 CDS
T11056
Symbol
RFX1
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1
KO
K09173
regulatory factor X 1/2/3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
136000902 (RFX1)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Other basic domains
RF-X
136000902 (RFX1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
Syntaxin
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
136000902
NCBI-ProteinID:
XP_065510972
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Position
36:complement(157445..167385)
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AA seq
757 aa
AA seq
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EGALRASEGVAEGSPAPPAAPPAGPSPGVPGTQCSPAPTGAAAPKPQEVTPLPHVYPAPY
VEGGDGSYPPAAIRSGSFPFTETPLYTPNAGAAYYEGGAAAAAAGGGPVQPSPPPPTSQA
PPPVYVPGGGGGAAAGGGGPILGSAPPPPPAAPAAPPPAAAAPPPPPGGTYVIQGGYVLG
GGAQSYSHTTRASPVTVQWLLENYEAAEGVSLPRSTLYCHYLLHCQAQKLEPVNAASFGK
LIRSVFVGLRTRRLGTRGNSKYHYYGLRIKGSSPLLRLMEDQQHLAMRQQPFAQKQRLKP
IQKVEGGVTNGVTPQPPPGLSDISAQVQQYQQFLDASRPLGEFPELDLQGKPLPDGAGAD
DLKTFQLLYREHCEAIVDVMINLQFTLVETLWKTFWRCGLNQPGDATAAXVSPRARGRAG
GPGATAVTFSLVPERHEEAEKRLPKCRLVLLSKFEPLLRWVRDCDHALYQGLVEILIPDV
LRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRVKVAAASAFAQTLRRYTSLNHLAQ
AARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCRAGLVSRLEQDFKATLQQQHSLE
QWAAWLDGVVGRVLRPHLGTAALPRAAKRFLLKWSFYSSMVIRDLTLRSAASFGSFHLIR
LLYDEYMYYLVEQRVARARGQSPIAVMGEFANLSSSFNALDAEKDEEEEEEEESDEELPQ
ELPLGEGPALPPAPLEPPPAKLPRTDRGLFVQALPSS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gagggcgccctgcgggccagcgagggcgtggccgagggcagccccgccccccccgcggcc
cccccggccgggcccagcccgggggtcccgggcacccagtgctccccagcaccgaccggc
gccgccgcccccaaaccccaggaggtgacgccgctgccgcacgtttaccccgcgccctac
gtggaggggggcgacggttcctacccccccgccgccatccgctcgggctcgttcccgttc
accgaaacgccgctttacaccccaaacgccggcgccgcttattatgaggggggggcggcg
gcggcggccgccggggggggcccggtgcagcccagcccccccccgccaacttcgcaggcc
cccccccccgtctacgtcccaggggggggcgggggggcggcggcggggggggggggcccc
attttggggagcgctcccccccctccccccgccgcccccgccgcgccccccccggccgcc
gccgcccccccgcccccccccggcggcacctacgtcatccagggggggtacgtgctgggg
gggggcgcccagtcctactcgcacaccacccgcgcctcccccgtcacggttcaatggctg
ctggagaactacgaggcggccgagggcgtgagcctcccgcgcagcaccctgtactgccac
tacctgctgcactgccaggcgcagaaactcgagcccgtcaacgccgcgtctttcgggaaa
ctgatccgctccgtgttcgtggggctgcgcacccggcgcctggggacgaggggtaactcc
aagtaccactactatgggctgcggatcaagggcagctccccgctgctgcggctcatggag
gaccagcagcacctggccatgcgccagcagcccttcgcgcagaagcagcggctgaagccc
attcagaaggtggaggggggggtgaccaacggggtgaccccccagccccccccgggactc
tccgacatcagcgcccaggtccagcagtaccagcagtttttggacgcctcccgcccgctg
ggcgagttccccgagctggacctgcaggggaagccgcttcccgacggcgccggcgccgac
gacctcaaaaccttccagctgctttaccgcgagcactgcgaggccatcgtggacgtgatg
atcaacctccagttcacgctggtggagacgctgtggaaaacgttctggcgctgcggtttg
aaccagcccggcgacgccacggcggcgtgagtgtccccgcgggctcggggccgcgccggt
ggccccggggccaccgcggtgacgttcagtctcgtccccgaaaggcacgaggaagccgag
aagcgtctccccaagtgtcgcctggtcctgctgtccaaattcgagcctctgctgcgctgg
gtgcgcgactgcgaccacgcgctctaccaggggctggtggagatcctgatccccgacgtc
ctgcggcccatccccagtgccttgacccaagcgatccgcaatttcgccaaaagtttggag
agctggttgaccaacgcgatgatgaacatccccgaggagatggttcgcgtgaaggtggcg
gcagcaagtgcctttgcccaaactttgcggcgttacacgtcgctgaaccacctggcgcag
gcggcgcgcgccgtcctgcagaacacggcccagatcaaccagatgctgagcgacctcaac
cgcgtcgacttcgccaacgtgcaggagcaggcgtcctgggtgtgccggtgccgcgcgggg
ctggtctcgcgcctggagcaggatttcaaggccacgctgcagcagcagcactcgctggag
cagtgggcggcctggctggacggcgtcgtgggccgcgtgctgcgcccgcacctggggaca
gccgccttgccgcgcgccgccaagcgcttcctgctcaagtggtccttctacagctccatg
gtgatccgtgacctgaccctgcgcagcgccgcctccttcggctccttccacctcatccgc
ctgctctacgacgagtacatgtactacctggtggagcagcgcgtggcgcgggcgcgcggc
cagagccccatcgccgtcatgggcgagttcgccaacctgagcagctccttcaacgcgctg
gatgcggagaaagacgaggaggaagaggaggaagaggagagcgacgaggagctgccgcag
gagctgccgctgggggaggggccggcgctgccccccgcccccctggagcccccccccgcc
aaactgccccgcaccgaccgcggcctcttcgtccaggccctgccctccagctga
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