Caloenas nicobarica (Nicobar pigeon): 136000909
Help
Entry
136000909 CDS
T11056
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00310
Lysine degradation
cnic00514
Other types of O-glycan biosynthesis
cnic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
136000909 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
136000909 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cnic01003
]
136000909 (COLGALT1)
Enzymes [BR:
cnic01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
136000909 (COLGALT1)
Glycosyltransferases [BR:
cnic01003
]
O-Glycan biosynthesis
O-linked Gal type
136000909 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
136000909
NCBI-ProteinID:
XP_065510980
LinkDB
All DBs
Position
36:667408..>676831
Genome browser
AA seq
611 aa
AA seq
DB search
MAAARPWPLLLLALAAGPGPGPGPGPGPGPVPVGGYFPEERWSPESPLRPPRVAIALLAR
NAAHALPVALGALERLRHPKERTALWVAADHSVDNTTAMLREWLGRVRGLYHRVEWRPQE
EPRSYPDEEGPKHWSPSRYEHVMKLRQAALDSARAIWADYLLFLDADNVLTNPDTLALLM
AENRTVVAPMLDSRAAYSNFWCGMTAQGYYRRTPAYLPLRRRERRGCFAVPMVHSTFLLD
LRREATRALAFYPPHPHYTGAFDDIIVFAFSCRQAGVQMFVSNRAPFGFLPVPLRSQSSL
RDEAENFLHVTLEIMVKNPPAEPTPHIWVPPKVPDKMGFDEVFLINLPRRADRRARMLRT
LHEQEIAAKLVEAVDGRALNSSEVEALGVRMLPGYRDPYHGRPLTRGELGCFLSHHRVWQ
EIAARGLSRSLVFEDDLRFEIFFKRRLTTLMRELEAAALPWDLIYIGRKRMQVERPEKPV
PGVRNLVEADYSYWTLGYALSLRGARKLLAARPLGKMLPVDEFLPVMFDKHPLPEYRRHF
PRRDLAAFSAEPLLVFPTHYTGDAGYVSDTETSVLWDDEATATDWDRGRERGRRGLRNVG
GAPDMGGSPDM
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcggccgtggccgctgctgctgctggcgctggcggcggggccggggccg
ggtccaggcccggggccgggcccggggccggtgccggtcggcgggtatttccccgaggag
cgctggagccccgagtcgccgctgcggccgccgcgggtggcgatcgcgctgctggcgcgg
aacgcggcgcacgcgctgccggtggcgctgggggcgctggagcggctgcggcaccccaag
gagcggacggcgctgtgggtcgccgccgatcacagcgtggacaacacgaccgcgatgctg
cgggagtggctgggccgggtgcggggcctttaccaccgcgtggagtggcggccgcaggag
gagccgcggtcgtaccccgatgaggagggtcccaagcactggtccccgtcccgttacgag
cacgtgatgaagctgcgtcaggcggcgctggactcggcccgcgccatctgggccgattac
ctgctgttcctggacgccgacaacgtgctgaccaaccccgacacgctggcgctgctgatg
gccgagaacaggacagtggtggcgccgatgctggactcgcgcgccgcgtattccaacttc
tggtgcgggatgacggcgcagggctattaccggcgcaccccagcgtacctgccgctgcgg
cggcgcgagcggcgcggctgcttcgcggtgcccatggtgcactcgaccttcctgctggac
ctgcggcgcgaggccacgcgggcgctggccttctacccgccccatccccactacaccggc
gccttcgacgacatcatcgtcttcgccttctcctgccgccaggccggggtgcagatgttc
gtgtccaaccgggcgccgttcgggttcctgccggtgccgctgcggtcgcagagctccctg
cgcgacgaggccgagaacttcctgcacgtcaccctggagatcatggtgaagaaccccccg
gcggagccgaccccccacatctgggtccccccaaaggtccccgacaagatgggatttgat
gaggttttcctgatcaacctcccgcgccgagccgaccgccgggcgcggatgctgcggacg
ctgcacgagcaggagatcgcggccaagctggtggaggccgtggacggcagggcgctgaac
agcagcgaggtggaggcgctgggcgtgcggatgctgcccgggtaccgggacccctaccac
gggcggccgctgacgcgcggggagctcggctgcttcctcagtcaccaccgcgtctggcag
gagatcgcggcgcggggcctgtcccgctccctggtgttcgaggacgaccttcgcttcgag
atcttcttcaagcgccgcctcaccacgctgatgcgcgagctggaggcggccgcgctgccc
tgggacctcatctacatcgggaggaagcggatgcaggtggagcggccggagaagccggtg
ccgggcgtgcggaacctggtggaggccgattactcgtactggacgctgggctacgcgctg
tcgctgcgcggcgcccgcaagctgctggcggcccggccgctgggcaagatgctgccggtg
gacgagttcctgcccgtcatgttcgacaagcacccgctccccgagtaccgccggcacttc
ccgcgccgcgacctggcggcgttctccgcggagcccctgctcgtgttccccacgcactac
acgggcgacgccgggtacgtgagcgacaccgagacctcggtgctgtgggacgacgaggcc
acggccaccgactgggaccgggggcgcgagcgggggcgccgggggctgcgcaacgtgggg
ggcgcgccggacatgggggggtctccggacatg
DBGET
integrated database retrieval system
