Caloenas nicobarica (Nicobar pigeon): 136000949
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Entry
136000949 CDS
T11056
Symbol
KHSRP
Name
(RefSeq) LOW QUALITY PROTEIN: far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
cnic
Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
136000949 (KHSRP)
03041 Spliceosome [BR:
cnic03041
]
136000949 (KHSRP)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
136000949 (KHSRP)
Spliceosome [BR:
cnic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
136000949 (KHSRP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
CG7065_mid
Motif
Other DBs
NCBI-GeneID:
136000949
NCBI-ProteinID:
XP_065511040
LinkDB
All DBs
Position
36:375970..383704
Genome browser
AA seq
733 aa
AA seq
DB search
MSDYSPAGPPPTPGPPGGAPAAPSTGAPQPPGAAGTAAGGPSGGPGPGGAGGGIRKDAFA
DAVQRARQIAAKIGGDTATTVNNNTPDFGFGGQKRQLEDGDQPESKKLATQGDSLPTQLG
PIHPPPRSTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLT
GSPEAVQKAKLLLDDIVSRGRGGPPGQFHENANGQNGTVQEIMIPAGKAGLVIGKGGETI
KQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNE
YGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPP
DRCEHAARIINDLLQSLRSGPPGPPGPGIPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCG
LVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEG
PLCPVGPGPGGPPGPTGPMGPFNPGPFNQGPPGAPPHPGGPPPHQYPPXGWGNTYPQWQP
PAPHDPSKTAAADPNAAWAAYYSHYYQQPPGPVPGGPPAPAAAPPVQGEPPQPPPTGQAD
YTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAAQVATGGGPGAPPGPQPDYSA
AWAEYYRQQAAYYGQTPGGAGPAPPPRSRDSRLSEPNVNPPSVTPPFVFGERLRAAPPQN
KTTTPPPKVLGGA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattacagccccgccgggccgcctcccaccccagggccgcccggaggggccccc
gccgccccttccacgggggccccgcaacctccgggagccgccggaaccgcggcggggggc
ccaagcggcgggccgggccccggcggcgcggggggggggatccggaaagacgcgttcgcc
gacgccgttcagcgggcccggcagatagcggcgaaaatcgggggggacacggcgaccacg
gtcaacaacaacacccccgatttcggcttcggggggcagaagcggcagctggaggatggt
gatcagccagagagcaagaagttggcgacacagggggattcactcccgacccagctggga
cccatccacccccctcccagatcgacggtaacagaggaatatcgcgtccccgacgggatg
gtgggactcattatcggacgtgggggggagcaaatcaacaagatccagcaggactcgggt
tgcaaagtacagatctccccagacagcggcgggttacccgagcgcagcgtctccctcacc
ggctcccccgaggccgtgcaaaaagcaaaactcctcctggacgacattgtatcgcggggg
cgggggggccccccgggacagttccacgaaaacgccaacggccagaacgggacggtgcag
gaaattatgatcccggccggcaaagccgggttggttatcggcaaaggcggcgaaaccatc
aaacaactgcaggagcgagcaggggtgaagatgattctgatccaggacggttcgcaaaac
accaacgtggacaaaccgctgcggataatcggggatccttacaaagtccagcaagcctgc
gagatggtgatggacattctgcgcgagcgcgaccagggcgggttcggcgaccgcaacgaa
tacggttcccgggtcggcggcggcatcgacgtgccggtcccccggcactcggtcggcgtc
gtcatcggccgcagcggcgagatgattaaaaaaatccagaacgacgcgggggtgcggata
cagtttaaacaagatgacgggacgggccccgaaaaaatcgcccacatcatgggccccccc
gaccgttgcgaacacgccgcccgtatcatcaacgacctcctgcagagcctgcggagcggc
cccccgggaccccccggcccggggatccctccgggggggcgggggagagggaggggccag
ggaaattggggcccccccgggggtgaaatgaccttctccatccccacccataaatgcggg
ttggtcatcgggagaggcggggagaacgtcaaagccattaaccaacaaacgggggcgttc
gtggagatttctcgccagttgccccccaacggtgaccccaacttcaaactcttcatcatc
cgcggctccccccagcaaatcgaccacgccaagcagctcatcgaggagaaaatcgagggg
ccgctttgccccgtggggcccggcccggggggcccccccggccccaccggccctatggga
ccgttcaacccaggacccttcaaccaaggcccccccggcgcccccccgcaccccggcggc
ccccccccccatcaatacccccccnaaggttggggcaacacttacccgcaatggcaaccg
ccggccccccacgaccccagtaaaacggcggccgccgaccccaacgccgcttgggccgcg
tattattcccattattaccagcagcccccggggccggtgccgggggggccccccgcccct
gccgccgccccccccgtgcagggggagcccccccagcccccccccaccggtcaggccgat
tacaccaaggcctgggaggaatattataaaaaaataggccagcagccccagcaacctggg
gcccccccgcaacaggactacacgaaagcctgggaggaatattacaaaaaacaagcggcg
caagtggcaacagggggtggtcccggggccccccccggcccccaacccgactacagcgcg
gcctgggctgagtattatcggcagcaggcggcttattacgggcaaaccccggggggggca
gggcccgcgccccccccacgcagcagggacagcaggctcagtgaaccgaatgtgaacccc
ccgtctgtgacccccccttttgtttttggcgagcggctgcgagcggcccccccccaaaat
aaaaccaccaccccccccccaaaagttttggggggggcttaa
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