Caloenas nicobarica (Nicobar pigeon): 136001023
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Entry
136001023 CDS
T11056
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04517
IgSF CAM signaling
cnic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136001023 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136001023 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
136001023 (SPTBN4)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
136001023 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
136001023 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CH_2
Motif
Other DBs
NCBI-GeneID:
136001023
NCBI-ProteinID:
XP_065511141
LinkDB
All DBs
Position
37
Genome browser
AA seq
2617 aa
AA seq
DB search
MAAELDNMEQQNNNNGPWDPPEPPRGWDDPAATAKIFECSRIKALADERDAVQKKTFTKW
VNSHLARVSCRIGDLYADLRDGFVLTRLLEVLSGEQLPKPTRGRMRIHSLENVDKALQFL
KEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIKTEDNRETRSAKDALLLWC
QMKTAGYPEVNIQNFTTSWRDGLAFNALIHKHRPDLIDFHKLTKSNATYNLQQAFNTAEQ
QLGLSKLLDPEDVNMEDPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQAMEIEAI
AERYEALAAELLAWIHHTVTIIANQKFANSLSGVQQQLQAFTAFCTLEKPVKFQEKGNLE
VLLFTIQSKLRANNRKLYVPSEGKSISDINKAWTCLEKAEHEREVSLRNELIRQEKLELL
AQRFDHKVVMRETWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVVVE
LAVEMESEGYYDTKRISAQKDNVLRQWGLLTELVRARRARLEQNLALQKIFQEMVYMIDW
MEEMQALLVSKELGKHLLEAEDLLQKHGLLEADIAAQTERVRALNAAALRFSELEGYQPC
DPQIVCNRVNHVQTCLEELGELAGKRRKELEDSRQLWAFFQEMEEAEAWIREKEQILAAK
TCGRDLSSVLTLTTKHKSMLGELGNRRALLHQTVKKGEQILAKKRFSPGAIQEKMREVRQ
RWKKLEEVTGLHQQRLQDALNFFQFSAETDDLVAWLQDTYRIVSSDDFGHDDYSTQALLR
KHRAVVEEVEKHRAAILALRKQLALLAPEHRQGVDVQIRVVEVEQLYGEVAEVAVLRQQW
LQDALAVYRMFSEVHACEVWLDEKEQWLEKMEVPEELDEVEVVQHRFESLDQEMNSVMGR
VLDVNQVVQQLVDGGHPSSEEVRSCQDHLNGRWNRVVELVEQKKTQLSSILKIQNYLLEC
GEMKAQVREKRKAIEATQSGGGDLGGILALQRRLSTMEAALVVLEPRLVELQREGEALAA
DHPGRALEILLPFEQISEEWEALKRALQGCEDSLTIAGRLQQFIQDLDNFLGWLVKTQAA
VASEEVPETLADAERLLNHHVALKEEINGYEEDYAKIQAASDLLALEETEVPYLSLQQWL
QKLDAGWGNLLQSWETRREVLVQAHVYQLFLRDVQQCESSLDNQESTLLHAELPATVEGA
TNALKKHQDFTTTMELNLQKVQLVLQAGESLQRQGNLYGDRAAEAAERLRNKSLHNQRLA
QERTRRLKDQLELQKFLQNCRELDAWVREQVLMAGDPSRDPPPTPKSWQRERAVLAELPQ
NREWLRRIEKEGEELLLAKPELGGAVRRQLEELRQCWAELEATSQARSRRLAEAAAAERL
ARSFAEMEARLGRLEEQLESVGAAPDLRGIGRQLQRLQTMESQVEEWSKEVGELQVAAAA
LPAQAAGRQEVGDRQSAVGTRMVRLIEPLKERRRVLLAAKELHQVHHELEDEVLWVQERL
PLATLKDQGTNLQTVQQFIKKNQNLRREIQVHRPRVDEVLERAGAVATIKSPEAEGVREL
LERLGTMWTELQDQAEHRQQNLDATYQLQQYYFDVAEVESWLGEQELLLMSDEKGKDEQS
TLQLLKKHLLMEQTVENYEETIAQLSRQCRALLELGHPQSEQVSRRQSQVDRLYVSLKDL
VEERKAKLEQQYWLYQLNREVDELEHWIAEKEVVATSPELGQDFEHVTVLQEKFLEFASE
TGSVGQERIAAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRAQMLAASHE
LHKFFNDCKEVLGQIEEKRQRLPELAAREGRASAGALQRALGAFEHDVEVLVTQVRQLQE
GAAQLRTLYAGDNAEAIAGREQEVLRAWKELLAACEECRLHVVNVAEKIRFVGAVRDLLA
WMDGVLCQIGAGEKPRDVSSVELLMNDHQSLKSEMDARAKSVATCLELGKSLILSKSPAA
DEIKAHVEKLLAKKKEMTEKWDKHWEWLQQMLEVHQFAQEAVVAEAWLTAQEPLLRSREL
GSSVDEVEQLLRRHEAFRKAAAAWEERFSSLRRLTTRHLHLHPDPHLHLCLLHFHSLSPS
LFRLRLCLHLCLHLHLHPISISIFILIFILSASCSSPSSSSSSSFSSPSPSPSSSSPPSS
SSPPSASSSSSSFSSSSSSSSSSSSSSSSLSSSSSSSSLSSSSSSSSSSSSSPSPSHLTS
VSVSISVSSLSPSPSSSSSSSSSPRTPQIEKLKAEQNKQPPTPLLTRKFLGGEPAAPPSP
AATAPSPGGDHRRVAYVRHELRPERLQPRLDRVPPAAAAGPGGDTPRDVTAGDPPAPPQA
EEGPEGRPGLLERRRERRERRLERQESSEPEPPRQDGKGKATLADIVEQLQEKEAGGPAP
ASPRERDPPARLPPGPEALPERTPRPDRPRARDRPRPRRRPRPKDPAQGAAGDARRSRSA
PAQSSAPPAPPPAHTVAHEGFLLRKHELDGPKKAANRSWVNLYCVLSKGDLGFYKDAKAH
AGGSTHGGEPLLNLHRSTSEVASDYKKKKNVFKLKTGDGSEFLLQARDEEDMRGWLKALA
TSVQEHAEVARWQQGLVTTSSTDEGPPRRPSASARRK
NT seq
7854 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgaactggacaacatggagcagcagaacaacaacaacggcccctgggacccc
cccgagcccccccggggctgggacgaccccgcggccactgccaagatcttcgagtgctcc
cgcatcaaggccctggccgacgagcgggacgcggtgcagaagaaaaccttcaccaagtgg
gtgaactcgcacctggcgcgcgtctcctgccgcatcggcgacctctacgccgacctgcgc
gacggcttcgtgctcacgcggctcctggaggtcctgtcgggggagcagctgcccaagccg
acgcggggccggatgcggatccactctctggagaacgtggacaaggcgctgcagttcctc
aaggagcagcgggtgcacctggagaacgtggggtcccacgacatcgtggacgggaaccac
cggctcaccctgggcctcatctggaccatcatcctgcgcttccagatccaggtgatcaaa
atcaagaccgaggacaatcgggagacgcgctcggccaaggacgcgctgctgctctggtgc
cagatgaagacggcgggctaccccgaggtgaacatccagaacttcaccaccagctggcgg
gacggcttggccttcaacgccctcatccacaagcaccggccggatctcatcgacttccac
aagttgaccaagtccaacgcgacctacaacctccaacaggccttcaacacggcggagcag
cagctggggctcagcaaactgctagaccccgaggacgtcaacatggaggaccccgatgag
aagtccatcatcacctatgtggtgtccttctaccactacttctccaagatgaaggcgctg
gcggtggaggggaagcgcatcgggaaggttctggaccaggccatggagattgaggccatc
gccgagcggtacgaggcgctggcggccgagctgctggcctggatccaccacaccgtcacc
atcatcgccaaccagaagttcgcaaactccttgagcggcgtccagcagcagctccaggcc
ttcaccgccttctgcaccctggagaaacccgtcaagttccaggagaaggggaacctggag
gtcctgctcttcaccatccagagcaaactacgggccaacaaccgtaaactctacgtcccc
agcgagggcaagagcatctccgacatcaacaaggcctggacctgcttggagaaggcggaa
cacgagcgggaggtgtcgttgcgcaacgagttgatccggcaggagaagctggagctgctg
gcccaacgtttcgaccacaaggtcgtcatgagggagacgtggctgaacgagaaccagcgc
ctggtctcgcaggacaacttcggctacgacctgccggcggtggaggccgccatgaagaag
cacgaggccatcgaggccgacatctcctcctaccaagagcgcatccaggtggtggtggag
ttggccgtggagatggaatccgaaggctactacgacaccaagcgcatcagcgcccagaag
gacaacgtcctgcgccagtgggggctcctgaccgagctggtccgcgcccgccgcgcccgc
ctggagcagaacctggcgctgcagaagatcttccaggagatggtctacatgatcgactgg
atggaggagatgcaggcgctgctggtctccaaggagctggggaagcacctcctggaggcc
gaggacctgctgcagaagcacgggctgctggaggccgacatcgcggcgcagaccgagcgc
gtccgggccctcaacgccgccgccctcaggttctccgagctggaaggttaccaaccctgc
gacccccagatcgtctgcaaccgggtcaaccacgtccagacgtgcctggaggagctgggg
gagctggcggggaagaggcgcaaggagctggaggactcgcgccagctttgggccttcttc
caggagatggaggaggccgaggcctggatccgcgagaaggagcagatcctggcggccaag
acctgcggccgggacctcagcagcgtcttgaccttgaccaccaagcacaagagcatgttg
ggcgagctgggcaaccgccgggcgctgctccaccagacggtgaagaagggcgagcagatc
ctggccaagaagcgcttcagccccggcgccatccaggagaagatgcgggaggtccggcag
cgctggaagaagctggaggaggtgacggggctgcaccagcagcgcctgcaggacgcgctc
aacttcttccagttcagcgccgagacggacgacctggtggcctggctgcaggacacctac
cgcatcgtgtccagcgacgacttcggccacgacgactactccacccaggcccttctccgc
aagcaccgcgcggtggtggaggaggtggagaagcaccgggcggccatcctggccctcagg
aagcagttggccctcctggcgcccgagcaccggcagggggtggacgtgcagatccgggtg
gtggaggtggagcagctctacggggaggtggccgaggtggccgtgctgcggcagcagtgg
ctgcaggacgccctggccgtctaccgcatgttcagcgaggtccacgcctgcgaggtctgg
ctggacgagaaggagcagtggctggagaagatggaggtgccggaggagctggatgaggtt
gaggttgtccagcataggtttgagagcctggaccaggagatgaacagtgtcatgggtcgc
gtcttggacgtcaaccaggtggtgcagcagctggtggatgggggacaccccagctcggag
gaggttcggtcctgccaggaccacctcaacggcaggtggaaccgggtggtggagctggtg
gagcaaaagaagacccagctcagctccatcctgaagatccagaactacctcctggagtgc
ggcgagatgaaggcccaagtgcgggagaaaagaaaagccatcgaagccacccaatccggc
ggcggcgacctgggcggcatcttggccttgcagcgccgcctctccaccatggaggcggct
ttggtggtcctggaacctcggttggtggaacttcaacgcgaaggtgaagctttggctgcc
gaccaccccgggagggccctggagatcctgctgcccttcgagcagatcagcgaggagtgg
gaggccctcaagagggccctccagggctgcgaggactcgttgaccatcgctgggcgcctg
cagcagttcatccaagacctggacaacttcttgggttggttggtgaagacccaagcggcc
gtggcctccgaggaggtccccgagacactggccgacgccgagaggttgttgaaccaccat
gtggccctcaaggaggagatcaacggctacgaggaggactacgccaagatccaggcggcc
agtgacctgctggccctggaggagaccgaggtcccctacctgtccctgcagcagtggctg
cagaagttggacgctgggtgggggaatttgctgcagagctgggagacgcggcgggaggtc
ctggtgcaagcgcacgtctaccagctattcctccgggacgtccagcagtgcgagagcagc
cttgacaaccaggagtccacgctgctccacgccgagctcccggccacagtggaaggggcg
accaacgccctcaagaagcaccaggacttcaccaccaccatggagctcaacctgcagaag
gtccagctggtcctgcaggccggcgagagcctccagcgccagggcaacctctacggcgac
cgcgcggccgaggccgccgagcggctccgcaacaagagcctccacaaccagcggttggcc
caggagaggacgcggcggctgaaggaccagctggagctgcagaagttcctccagaactgc
cgcgagctggatgcgtgggtccgggagcaggtgctgatggccggggacccctcccgggac
ccccccccgacccccaagtcgtggcagcgggaacgggcggtgctggcggagctgccgcaa
aaccgcgagtggctgcggaggatcgagaaggaaggtgaagagctcctcctcgccaaaccc
gaactcggcggcgccgtccggcgccaactggaagagttgcgtcaatgttgggcggagctg
gaggccacgagccaggcccggagccggcgcttggccgaggcggcggcggccgagcggttg
gcgcggagcttcgccgagatggaggcgcgactggggcggctggaggagcagctggagagc
gtgggggccgcccccgacctgcgcggcatcgggcggcagctccagaggctgcagaccatg
gagtcgcaagtggaggagtggtccaaggaggtgggggagctgcaggtggcggcggcggcg
ctgccggcacaggccgcgggccggcaggaggtcggggaccggcagagcgcggtggggacg
cgcatggtccggctcatcgagcccctcaaggagagacggagggtcctgctggcagccaag
gagctgcaccaggtccaccatgagctggaggatgaggtgctgtgggtgcaggagcggctc
cccttggccacgctgaaggaccaaggcaccaacctgcagacggtccagcagttcatcaag
aagaaccagaacctccgccgggagatccaggtccaccggccgcgcgtggacgaggtgctg
gaacgcgccggcgccgtggccaccatcaaaagccccgaggccgaaggcgtccgcgagctg
ctggagcggctggggacgatgtggacggagctccaggaccaggccgagcaccggcagcag
aacctggacgccacgtaccagctgcagcaatactacttcgacgtggccgaggtggagtcg
tggttgggcgagcaggagcttctcctgatgagcgacgagaaggggaaggacgagcagagc
accctccagctcctcaagaagcatcttctgatggagcaaacggtggagaactacgaggag
accatcgcccaactgtcccgccagtgccgggcgctcctggagctcggtcaccctcaaagc
gaacaggtcagcaggcggcagtcgcaggttgaccggctgtacgtgtctctgaaggacctg
gtggaggaacgcaaggccaagctggagcagcagtactggctctaccagctcaaccgcgag
gtggacgagctggagcactggatcgccgagaaggaggtggtggccacctcgcccgagctg
ggacaggacttcgagcacgtcacggtcctgcaggagaagttcctggagttcgccagcgag
acgggcagcgtggggcaggagcgcatcgccgccgtcaaccagatggtggacgagctcatc
gactacggccacgccgacgccgccaccatcgccgagtggaaggacggcgtcaacgaggcc
tgggccgacctgctggagctcatggagacccgcgcgcagatgctggcggcgtcgcacgag
ctgcacaagttcttcaacgactgcaaggaggttctggggcagatcgaggagaagcggcag
cggctgccggagctggcggcgcgggagggccgggcgtcggccggcgcgttgcagcgggcc
ttgggcgccttcgagcacgacgtggaggttctggtgacccaagtgcggcagctgcaggag
ggggcggcgcagctgaggaccctctacgccggggacaacgccgaggccatcgcggggcgc
gagcaggaggtgctgcgggcctggaaggagctgctggcggcctgcgaggagtgtcgtctg
cacgtggtcaacgtggccgagaagatccgcttcgtgggcgccgtcagggacctgctggcc
tggatggacggcgtcctgtgccagatcggcgccggggagaagcccagggacgtgtcctcg
gtggagctgctgatgaacgaccaccaaagcctcaagagcgagatggatgcacgcgccaag
agcgtggccacctgcctggagttgggcaagagcctcatcctcagcaagagcccggcggcc
gacgagatcaaagcccatgtggagaagctgttggccaagaagaaggagatgacggagaag
tgggacaagcactgggagtggctccagcagatgctggaggtccaccagtttgcccaggag
gcggtggtggccgaggcctggctgacggcgcaggagccgctgctgcggagccgggagctg
ggcagcagcgtggacgaggtggagcagcttctgcggcgccacgaggccttcaggaaggcg
gcggccgcctgggaggagcggttcagctccctgcggcgcctcaccacgcgtcatcttcac
ctccatcctgatccccatcttcatctttgtcttcttcattttcattctttgtctccatct
ctgttccgtcttcgtctttgtctccacctttgtcttcatcttcatctccatcccatctcc
atctccatcttcatcttgatcttcatcttatcagcttcatgttcatctccatcttcctct
tcgtcttcatctttttcatctccatccccttccccatcttcatcttcacctccatcttca
tcttcacccccatctgcatcttcttcatcttcttcgttttcttcgtcttcttcatcttct
tcatcttcttcatcttcttcgtcttctttgtcttcttcatcttcttcgtcttctttgtct
tcttcatcttcttcatcttcttcatcttcttcgtctccgtctccatctcatctcacctcg
gtctccgtctccatctctgtctcatctctgtctccatctccgtcatcttcctcttcctct
tcttcctctccccgcaccccgcagatcgagaagctcaaggccgagcagaacaagcagccg
ccgacccccctcctgacccgcaagtttctggggggggaacccgcggcgcccccgtccccg
gcggcgaccgccccgtccccgggcggcgaccatcgccgcgtcgcctacgtgcgccacgag
ctgcggcccgagcgcctgcagcccaggctggaccgcgtccctcccgcggccgcggcgggg
cccggcggggacaccccccgcgatgtcaccgcaggggaccccccggcgcccccccaggcc
gaggaggggccggagggccggccggggctgctggagcggcgccgcgagcgccgcgagcgc
cggctggagcggcaggagtccagcgagccggagccgccgcgccaggacggcaaaggcaaa
gccaccctggccgacatcgtggagcagctgcaggagaaggaggcgggcggccccgcgccg
gcctcgccccgcgagcgggacccccccgcccgcctgccccccggcccggaggccctaccg
gagaggaccccccggcccgaccggccccgcgcgcgcgaccggccccgcccgcgccggcgg
ccccgccccaaggaccccgcccagggcgcggcgggcgacgcccggcgctcgcggtcggcc
ccggcgcagagctccgcgcccccggcgccgccgcccgcgcacaccgtggcgcacgagggg
ttcctgctgcgcaagcacgagctggacgggcccaagaaggcggccaacaggtcctgggtg
aacctctactgcgtcctgagcaagggggacctggggttctacaaggacgccaaggcgcac
gccggggggagcacccacgggggagaaccgctcctcaacctgcaccgctccaccagcgag
gtggccagcgactacaaaaagaagaaaaacgtcttcaaactcaagaccggcgacgggagc
gagttcctcctgcaggccagggatgaggaggacatgcgggggtggctcaaggccttggcc
accagcgtccaggagcacgccgaggtcgcccggtggcaacaaggactcgtcaccacgtcg
tccaccgacgaggggcccccccggcgccccagcgcctcggccaggcggaagtga
DBGET
integrated database retrieval system
