Caloenas nicobarica (Nicobar pigeon): 136001081
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Entry
136001081 CDS
T11056
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
136001081 (DHX34)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136001081 (DHX34)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
136001081 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_16
AAA_22
AAA_19
nSTAND3
ATPase
Motif
Other DBs
NCBI-GeneID:
136001081
NCBI-ProteinID:
XP_065511202
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All DBs
Position
37:836632..853715
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AA seq
1112 aa
AA seq
DB search
MESGPRRRQRNPSPPAWDWDCPDTRRRLEELYFGEQHHLRAGTEDAADFWAFFERLRRFQ
SRKSDREPPRETPREPDASASRLDLPRRYDPRYRINLAVPRSRRGDPGVPEKPLAEFRAA
LLHYLDFAQKRSFAKLAKIQKERAALPIWRYRERILGAVAENPVVVIAGDTGCGKSTQVP
QFLLAAGYERVACAQPRRVACVALAKRVALESLHQYGDQVGYQIRFESSRSAATRLLFLT
EGLLLRQLQRDPALPAYRVLIADEVHERHLHGDFLLGVLRRLLPARPDLRLILMSATINI
RLFSTYFGGAPVLQVPGRIFPISVIYQPVPKEEAATGKAGRAERLDPLPYLRVLQAIDHK
YPPEERGDLLVFLSGVAEIGAVLEAAQAYAARTQRWIVLPLHSTLSVAEQDKVFDVPPPG
VRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQAKLQRLQEFWISRASAEQRKGRA
GRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLKSMGLGDPRSFPFLEPPPAS
SLEMAVRYLQDQGALDDNEDLTPIGTLLAQLPVDVVVGKMLVLGVLFGLAEPTLTVAAAL
SIPSPLVRAAQPDPDRAAARRPLESPHGDPLTLLNLFNEWVQVKSQRGGSRRWCRHRGLE
EQRLYEAANLRRQFQELLRDHQLLDDPPEPPGDSCSRQSRHRERRELQRLWRRHAETHGR
KRKMLRLQDGAAGSSGEEEEDGGAKGERGVDIQDVKFKLRHNVEELQAASSSVLTPSQLV
LLKLVLCRGLYPQLAVPDELNTSRKDSDQIFHTKNKQGVVLHPTSVFAASPELLHAKEGG
KHGGAKDPAEGLSCHHQLLAFVSLLETNKPYLVNCVRVPALQALLLFSRSLDTSADCSRL
VADGWLEMAVPDADAALRLLAAALRLRSSWEKLLRQLLELRGEEMGQRPNPRDVSALARG
LLDFVRAEVPFRLRPLTGLEKQNLYVGPQTVAAAPQLPGLFEGVEMTPDEVKGGHRVTDF
LTYNCLATDTDLYSDCLRSFWTCPHCQLHAPFTPLERVCHENACQPPQEPEEETPETSSQ
TSSLHRFYHCDICQQDFSLTPTEILRHKKQHR
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggcccccggcgccgccagcgcaacccttccccgccggcctgggactgggac
tgtcccgacacgcggcgccgcctggaagagctttatttcggcgagcagcaccatctccgc
gccggcaccgaggacgccgccgacttctgggcctttttcgagcggctccggcgtttccaa
agccggaaaagcgaccgcgaaccaccccgggaaacaccccgagaacctgacgccagcgcg
tcccgcctggacctgccgcgccgctacgacccccggtaccgcatcaacctggcggtgccg
cggagccggcggggggaccccggcgtccccgagaagcccctcgccgaattccgcgccgcg
ttgttgcattacctggatttcgcccagaagcggagcttcgccaagctggccaagatccaa
aaggagcgcgcggcgctgcccatctggcgctaccgggagcggatcctcggcgccgtggcg
gagaatccggtggtggtgatcgccggcgacaccggctgcggcaaatccacgcaggtgccg
cagttcctgctggcggccggttacgagcgcgtggcttgcgcccaaccgcggcgcgtggcc
tgcgtggccctggccaagcgcgtggccctcgagagcctccaccagtacggggaccaggtg
ggctaccagatccgcttcgagagcagccgctcggcggccacgcggctgctgttcctgacc
gaggggctgctgctgcggcagctgcagcgcgacccggcgctccccgcctaccgcgtcctc
atcgccgacgaggttcacgagcggcacctccacggcgatttcctgctgggcgtcctgcgg
cgcctcctccccgctcgccccgacctccggctcatcctcatgtcggccaccatcaacatc
cgcctcttctcgacgtattttgggggcgccccagtgctgcaggtgccgggacggatcttt
cccatctcggttatttaccaaccggttcccaaagaagaagcggcgacggggaaggcgggc
agggcggagcggctggacccgctgccgtacctgcgggtgctccaggccatcgaccacaag
tacccgccggaggagcgcggcgacctgctggtgtttctgagcggggtcgccgaaatcggg
gcggttttggaggcggcgcaggcgtacgcggcgcggacccagcgctggatcgtgctgccc
ctgcacagcaccctctctgtggccgagcaggataaagtgtttgacgtcccccctcccgga
gtccgtaagtgcatcctctccaccaacatcgcagaaacctcggtgacgatcgacggcgtg
cgttttgtcctggattccgggaaggtgaaggagatgagttacgaccctcaggccaaactg
cagcggctgcaggagttttggatcagccgggcgagcgccgagcagcgcaagggccgcgcc
ggcaggaccggccccggcgtttgctaccggctctacgccgagtccgactacgatgctttt
tctccatatcccgtgccggagattcaacgagtagcgctcgatgctttggtgctgcagtta
aagagcatggggctgggcgacccccgaagtttcccctttttggagcctccccccgcatcc
agcctggagatggccgtgcggtacctgcaggaccagggagccctggacgacaacgaggac
ctgacgcccattgggaccctgctggcccagctcccggtggacgtggtggtcggcaaaatg
ctggtgctgggggtgctgttcggtctggccgagccgaccttgaccgtggcggccgcgctg
agcatcccgtcgccgctggtgcgcgcggcgcagcccgaccccgaccgcgccgcggcccgg
cggccgctcgagagcccccacggggaccccctgacgctgctcaacctcttcaacgagtgg
gtccaggtgaagtcgcagcgcggcggctctcggcggtggtgccggcaccgcgggctggag
gagcagcgactgtacgaagccgccaacctgcgccggcagttccaggagcttctccgcgac
caccagctcctggacgacccccccgagccgcccggcgacagctgcagccggcagagccgg
caccgcgagcgccgcgagctgcagcggctctggcgccgccacgccgagacccacggccgc
aagcgcaagatgctgcggctgcaagacggagccgccggctcctccggcgaggaggaggag
gacggcggcgcgaagggcgagcgcggcgtcgatatccaggacgtcaagttcaagctcagg
cacaacgtggaggagcttcaggccgcgtccagctccgtcctcaccccgtcccagctggtc
ctgctcaaactcgtgctgtgccgggggctttaccctcagctggctgtgcccgacgagctc
aacaccagccgcaaagattccgaccagatttttcacaccaaaaacaagcaaggcgtcgtc
cttcatcccaccagcgtcttcgccgccagccccgagctgctccacgccaaggagggaggg
aagcacggcggggccaaagaccccgcggaggggttgagctgccaccaccagctcctcgcc
ttcgtctcgctgctggagaccaacaaaccgtacctggtgaactgtgtccgcgtcccggcc
ctgcaggctctcctgctcttctcccgctcactggacaccagcgccgactgctcgcgcctg
gtggcggacggctggctggaaatggccgtccccgatgccgacgccgccctgcgcctcctc
gccgccgccctgcgcctccgctcctcctgggagaaactcctgcggcagctcctggagctc
cggggcgaggaaatggggcagcggccgaacccccgcgacgtgtccgcactcgcgcggggt
ctgctggacttcgtgcgcgcggaggtgccgtttcgcctgcgcccgctcaccgggctggag
aaacaaaacctctacgtggggccgcagacggtggcggccgcgccacagctcccggggctc
tttgagggcgtcgagatgacgcccgatgaggtgaaaggcggccacagggtgacggatttt
ctcacctacaactgcttggctacggacacggatctgtacagcgactgcctgcggagcttc
tggacgtgtccccactgtcaactccacgcgcccttcacccccctggagcgcgtgtgccac
gaaaacgcgtgtcagcccccccaggaacccgaagaagaaacccctgaaacttcctcccaa
acctcctccctccaccgattctaccactgtgacatttgccagcaggatttttccctcacc
cccacggaaattctccggcacaagaagcagcaccggtga
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