Caloenas nicobarica (Nicobar pigeon): 136001136
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Entry
136001136 CDS
T11056
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136001136 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
136001136 (SNRPA)
Spliceosome [BR:
cnic03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
136001136 (SNRPA)
Complex B
136001136 (SNRPA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
136001136
NCBI-ProteinID:
XP_065511284
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All DBs
Position
37:complement(13208..16857)
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AA seq
258 aa
AA seq
DB search
MAVPDARPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLRMRGQAFVIFK
ELSSATSALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKKKPKGQEAAK
KGSGGAAAGMAALPQAPRLLQHVAGQPPYMPPPGMMPPPGMPPGMPPQQVLPPAQTLSEN
PPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDSEVQAGAARDAL
QGFKITQSNAMKISFAKK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcggttccggacgcgcggcccaaccacacgatctacatcaacaacctcaacgagaag
atcaaaaaggacgagttaaaaaagtccctttacgccattttctcgcaattcgggcaaatc
ctggacatcctggtgtcgcggagcctgcgcatgcggggccaggcgttcgtcatcttcaag
gagctgagcagcgcgaccagcgccctgcgctccatgcagggcttccccttctacgacaag
cccatgcgcatccagtacgccaagacggactcggacatcatcgccaagatgaaggggacg
ttcgtggagagggacaggaagagggagaagaagaaaccgaaggggcaggaggcggcgaag
aaggggagcgggggggcggccgcgggcatggctgccctgccccaggcgccacggctgctg
cagcacgttgcggggcagcccccgtacatgcccccgccggggatgatgccccccccgggg
atgccccccgggatgcccccccagcaggtgctgccgccggcgcagacgctctcagaaaac
ccccccaaccacatcctgttcctgaccaacctgcccgaggagaccaacgagctgatgctc
tcgatgctcttcaaccagttcccggggttcaaggaggttcggctggtgcccggacgccac
gacattgcgttcgtggagtttgacagcgaggtgcaggcgggggcggcacgggatgcgctg
cagggcttcaaaatcacccagagcaacgccatgaagatctccttcgccaagaagtga
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