Caloenas nicobarica (Nicobar pigeon): 136001183
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Entry
136001183 CDS
T11056
Symbol
PRF1
Name
(RefSeq) LOW QUALITY PROTEIN: perforin-1
KO
K07818
perforin 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
136001183 (PRF1)
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
136001183
NCBI-ProteinID:
XP_065511339
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Position
38:270462..273650
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AA seq
719 aa
AA seq
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MPSTLVLLSLLSLCPPAAPGCHRARGAACAAPQVPGASILGWGLDVTTLSPTTGRVLDVD
DAADDVAGDVTCVLCPNPLAGGRRFRLPRGVGGWRAGRRCQQGALLLAGQGALGAVAGGR
EEVAAGWRLGLGAEVAPGGAGGAVTMAGSRSRAAEFGRSRWREDAVAFVRTGLRCTHYWT
SISPRARPSPHFLRSLRSLPPNFTAATAADYAALLAAYGTHYIRGARLGGRLDAVTSVRT
CRAAMTGSSLQEVADCLAAEITAGAGAGRAAAMAAACRRARAGNEANATFHEAYDERLVE
VEGGRQDGDLLYGQPQARAAWLRSLPARPGLVGADVRPLHAALGPRDPHRAALRAAVGHF
IARAALRLNCSCGDAVGSAAGPCGGCSAVPCSRRRGLARLRVTVLGGRGWRGDHFSRTDA
YVRVFFGGREARTGTAWNEQRPRWAATLDLGTVALAPGARLRLEVWDEDNGWDDDLLGAC
EAPISALGXGERGAVCFPGGGRLEFGYGVTCGPALGGPYCHDYVPQPPGELRDASDWPDD
PNNDGDDDDDANDDDDNDDDANDDDANDANDDNANDDNDANNDDANDDDANDANDDNAND
DNANDDDANDDDANDANDDNANDDDANDANDANDDDDNDDDANDDNANDDDADDANDANN
DADDANDADAAGTPRPGAPWRPPGLNGRRGDVGDRGEPTDAFGELPAAFWGPWEAPPDP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccctccacgctcgtcctcctgtccctcctgtccctctgtccccccgccgcccccggc
tgccaccgcgcccgcggcgccgcctgcgccgccccccaagtccccggcgcctccatcctg
ggctggggcctggacgtcaccaccttgtccccgaccaccggccgcgtcctcgacgtcgac
gacgctgccgacgacgtcgccggcgacgtcacctgcgtcctctgccccaaccccttggcc
ggggggcggcggttccgcctcccgcggggggtcggggggtggcgcgcggggcggcgctgc
cagcagggggcgctgctgctggcggggcagggggcgctgggggcggtggcggggggcagg
gaggaggtggcggcggggtggcggctggggctgggggcggaggtggcgccggggggcgcg
gggggcgcggtgaccatggccggctccaggtcgcgggcggccgagttcgggcgcagccgc
tggcgggaggacgcggtggcgttcgtcaggacggggctgcgctgcacgcactactggacg
tccatctccccccgcgcccgcccgtccccccacttcctccgctccctccgctccctgccg
cccaacttcaccgcggccaccgctgccgactacgccgccctcctggccgcctacggcacg
cactacatccggggggcgcgcctggggggccgcctggacgccgtcacctcggtgcgcacc
tgccgggccgccatgacgggctccagcctccaggaggtggccgactgcctggcggccgaa
atcacggccggcgccggcgcgggccgggccgccgccatggcggccgcgtgccgccgcgcg
cgggcgggcaacgaggccaacgccacgttccacgaggcctacgacgagcggctggtggag
gtggaaggcgggcggcaagacggcgacctgctctacggccaaccccaggcccgcgccgcc
tggctgcgcagcctcccggcccggccggggctggtgggcgccgacgtgcggcccctccac
gccgcgctgggcccgcgggacccccaccgcgccgcgctgcgggcggccgtcggccacttc
atcgcccgcgccgccctgcgcctcaactgcagctgcggcgacgccgtcggcagcgccgct
gggccctgcggcggctgctcggccgtcccctgctcgcggcgccgggggctggcgcgcctg
cgggtgacggtgctggggggccgggggtggcgcggggaccacttttcgaggacggacgcc
tacgtgcgggtgtttttcggggggcgggaggcgcggacgggcacggcgtggaacgagcag
cgcccgcgctgggcggccaccttggatttggggacggtggcgctggcgccgggcgcgcgc
ttgaggctggaggtttgggacgaggacaacggctgggacgacgacttgttgggggcgtgc
gaggcgcccatctcggcgctggggnggggcgagcgcggcgccgtttgcttccccggcggc
gggcgcctcgaattcggttacggggtgacgtgcggacccgctctgggggggccctattgt
cacgattacgtcccgcaaccccccggggagctccgggacgcctccgattggcccgacgac
ccaaataacgatggtgacgatgacgacgatgccaacgatgacgatgacaatgatgacgat
gccaacgatgacgatgccaacgatgccaacgatgacaatgccaacgatgacaatgatgcc
aacaatgacgatgccaacgatgacgatgccaatgatgccaacgatgacaatgccaacgat
gacaatgccaacgatgacgatgccaacgatgacgatgccaatgatgccaacgatgacaat
gccaacgatgacgatgccaacgatgccaatgatgccaacgatgacgatgacaatgatgac
gatgccaacgatgacaatgccaacgatgacgatgccgacgacgccaacgatgccaacaac
gatgccgacgacgccaacgatgccgacgccgccggcaccccgcgccccggcgccccctgg
cggcccccggggctcaacggccggcggggggacgtcggggaccgtggggagcccacggac
gcgttcggggagctcccggcggcgttttgggggccctgggaggcgcccccggacccgtag
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