Caloenas nicobarica (Nicobar pigeon): 136001237
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Entry
136001237 CDS
T11056
Symbol
SHANK1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
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Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
SAM_2
SH3_1
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
136001237
NCBI-ProteinID:
XP_065511408
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All DBs
Position
39
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AA seq
1411 aa
AA seq
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MSRTPASSEEEEGRGSEYPEGDSDSGSSREGPPKTNPGPPPRARGTPRPPPAPDDTPHFS
MMVFRIGIPDLHQTKCLRFDPGAAVWAAKQQLLCALTEGLHDGLNYGLFQPAAAGRDAKF
LDEERPLRDYPQSFEQGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLRKFLDYVQHGS
AEKVARLLERGLDPNYHDSDSGETPLTLAAQREGPAEVEIIRLLCLGGAHLDFRARDGAT
ALHRAVCTRRYHALMALLDLGGSPNYKDRRGLTPLYHTAMVGGDPRCCELLLAHRAAIGT
RDENGWQEIHQACQHGHSQHLEHLLFYGAEAAAQNASGNTALHICALYNKESCARILLYR
GANKEVKNNSGQTPFQVAVIAGNFELGELIKNHRDTDVVPFQESPQFTGGGGGRRRDPPR
GGSPCPPPRLLRANSDTGGGALPEWVLRGAPPAGRPPSGTLRSASSPRGGARTRSPSRGR
HPEEPRRQQRGRPRXGGRGAPGGDTXGGGAGPGGSLGXRGVKRKLYSAVPGRTFLAVKPY
QAQGEGELSLSKGERIKVLSVGEGGFWEGQARGRVGWFPSDCVEEVPPRTPEGRAESRSD
KAKRLFRHYTVGSYDSVDTPSDYIIKEKTVLLQKKDNEGFGFVLRGAKAQTPIEEFTPTP
AFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNSLVVKVV
MVTRHPEAPEGPRRPAPPPPRRLPAPAISLRSKSMTSELEEMDFDPPSATEKKRTVYQMA
LNKLDEILAAAQQSISAGEGPGPPLPPLGKTRPKGFFSPEGPFEPHRMGPGGFDRPFLPP
GPPHGLMLRQKSIGAPEEDKPFLAPPSGKFSRSLSVPGSDDIPPPPTTSPPEPPFSSPAP
PRGGGAGGGGRPVALGPLVKQTKVEEAAGGGPGGVALGDKSSIPIPTIVVKAPSTSSSGR
SSRGSSLEAEGGAGGGGGGDAPPPPAAGGAGGAGGGSIDEGLFAAGGGAYRGGGSAFSSV
SAAPPPPPAPPPAAAAAAAAAARALVAGGARGGLGGFGGAATMPLGGLGGLRGAAPPPPP
APPAEGGPPPAVGDSAASSLTSYDSEVATLTQGPPPQGGTTRGAGGGGPGSAGGGPDGPE
VVTDSGIEEIDSRSSSDHPPEGGGEGPPPPFAPLLEGGGERSRARAARGGPRAGGGPEGG
RRPESWDESGRGSGGGCWPRGGADGSRTPRPLPHRPAPPNPPPPFPQLAAPPPKPTLVGL
GGEGLDVRPPLRRAPSPAPLPTERRGSPAPRPASLPTLPTXPLYGGFLELRGPGGVPGPS
PPSRSLSPTRPPPPPPDKPXGAKPLAFWSKFDVADWLEYLNLGEHRARFLHNEIDGSHLP
ALTKEDYIDLGVTRVGHRMNIDRALRLFLER
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcacgccggcgtccagcgaggaggaggagggtcggggctccgagtaccccgaa
ggcgactcggactcggggagttcccgcgagggcccccccaaaaccaaccccgggcccccg
ccccgcgcccgagggaccccccggccccccccggcccccgacgacaccccccacttcagc
atgatggttttccgcatcggcatccccgacctgcaccagacgaagtgcctgcgtttcgac
cccggcgcggccgtgtgggcggccaagcagcagctgctgtgcgcgctgaccgaggggctg
cacgacgggctcaactacgggctgttccagcccgcggccgctggccgcgacgccaagttc
ctggacgaggagcggccgctgcgcgactacccgcagagcttcgagcagggcgtgccctac
ctcgagttccgctacaagacgcgggtgtacaagcagaccaacctggacgagaagcagctg
gccaagctgcacaccaagacggggctgcgcaagttcctggattacgttcagcacggctcg
gcggagaaggtggcgcggctgctggagcgggggctggaccccaactaccacgactcggac
tcgggggagacccccctgactctggccgcccagcgcgagggcccggccgaggtcgagatc
atccggctgctctgcctggggggggcgcacctggacttccgggcgcgcgacggcgccacc
gcgctgcaccgcgccgtgtgcacccggcgctaccacgcgctcatggcgctgctggacctg
ggggggtccccgaactacaaggaccggcgcgggctgacccccctgtaccacacggccatg
gtggggggcgacccccggtgctgcgagctgctgctggcgcatcgcgccgccatcggcacc
cgcgacgagaacggctggcaggagatccaccaggcgtgccagcacggccactcgcagcac
ctggagcatttgctgttctacggggcggaggccgcggctcagaacgcgtcggggaacacg
gcgctgcacatctgcgccctgtacaacaaggagagctgcgcccgcatcctgctgtaccga
ggggccaacaaggaggtgaagaacaacagcggccagacgcccttccaggtcgccgtcatc
gccgggaacttcgaactgggggagctgatcaagaaccatcgggacacggacgtggtcccc
ttccaggagagcccccaattcaccggggggggcggggggcggcggcgcgaccccccccgg
gggggctccccctgcccccccccccggctgctccgcgccaacagcgacacgggggggggg
gcgctccccgagtgggtgctgcggggcgccccccccgccggccgccccccctcgggcacc
ctgcgcagcgccagcagcccccgcgggggggcccggacacgctccccgtcccgggggcgc
caccccgaggagccgcggaggcagcagagggggcggcccaggtgaggggggcggggggcg
ccggggggggacacttaaggggggggggccggccccggcgggtccctgggcngccggggg
gtgaagcgcaaactctactcggccgttcccgggcgcacgttcctggcggtgaagccgtat
caggcgcagggggagggggagctgtcgctcagcaagggcgagcgcatcaaagtgctgagc
gtcggcgagggggggttctgggagggccaggcccgcggccgcgtcggctggttcccctcg
gactgcgtggaggaggttccgccccggacccccgaggggcgcgcagagagccgcagcgac
aaggccaagcggctgttccgccactacacggtggggtcgtacgacagcgtcgacaccccc
agtgattacatcatcaaggagaagacggttttgctgcagaaaaaggacaacgaggggttc
ggcttcgtgctgcggggggccaaggcgcagacgcccatcgaggagttcacccccacgccg
gcgttcccggcgctgcagtacctggagtcggtggacgagggcggcgtggcctggagggcc
gggctgaggatgggggatttcctcatcgaggtgaacgggcagaacgtggtcaaggtcggg
caccggcaggtggtcaacatgatccgccagggcgggaacagcctcgtggtcaaggtcgtc
atggtgacccggcacccggaggcgcccgaggggccgcggcggcccgcgccccctcccccg
cggcgcctcccagctcccgccatttccctgcgctccaagtccatgacgtcagagctggag
gagatggatttcgaccccccctcggccaccgagaagaagcgaacggtttatcagatggcg
ctgaataaactggacgagattttggccgccgctcaacagagcatcagcgcgggggagggg
ccggggccccccctgccccccctgggcaaaacgcgccccaagggcttcttcagccccgag
ggccccttcgagccgcaccgaatggggccgggggggttcgaccggcccttcctgcccccc
gggcccccccacgggctgatgctgcgccagaaatccatcggcgccccggaggaggacaag
ccgttcctggccccccccagcgggaagttcagccgcagcctctcggtcccgggctccgac
gacatcccccctccccccaccacgtccccccccgagcccccgttcagcagccccgccccc
ccgcggggggggggggccggcgggggggggcggcccgtggcgcttgggccgctggtgaag
cagacgaaggtggaggaggcggccgggggggggcccgggggggtggcgctgggggacaag
agttcgatccccatccccaccatcgtggtcaaagccccgtccaccagcagcagcggccgc
agcagccgcgggagcagcctggaggccgaggggggggcggggggggggggcggcggcgac
gcgccccccccccccgcggcggggggagcggggggggcggggggggggagcatcgacgag
gggctgttcgccgcgggggggggcgcgtaccggggggggggcagcgcgttcagcagcgtg
agcgccgccccgccccccccccccgcgcccccccccgccgccgccgccgccgctgccgcc
gcggcgcgcgcgctcgtggcggggggggccaggggggggctgggggggttcgggggggcg
gccacgatgccgctgggggggctgggggggcttcgaggggccgcccccccgccgccgccc
gccccccccgcggagggcggccccccccccgccgtgggcgactccgccgcctccagcctc
acgtcgtacgacagcgaagtggccacgctgacccagggcccccccccgcaaggcggcacc
acccgcggggcgggggggggcggccccggttccgccggggggggccccgacgggcccgag
gtggtgacggactcggggatcgaggagatcgacagtcgcagcagcagcgaccaccccccc
gagggggggggcgaggggccccccccgcccttcgcccccctgctggagggggggggggag
cggagccgcgcgcgggcggcgcggggggggccccgggctgggggggggcccgaggggggg
cggcggccggagagctgggacgagagcgggcgaggaagcggcggcggctgctggccccgg
gggggcgcggacggctcccggaccccacggcccctcccccaccgtccagcgcccccaaac
ccaccgccgccctttccccaactggccgccccccccccgaaacccaccctggtcgggctg
gggggggaggggctggacgtgcgcccccccctccgccgcgcccccagccccgcccccctc
cccacggagcgccggggcagccccgccccccgccccgcctccctgcccaccctccccacc
ncccccctgtacggggggttcctggagctgcgggggcccgggggggttcccggaccttcc
cccccctcccgctccttgtccccgacccgcccgccccccccccccccggataaacctntt
ggggcgaaacctttggctttctggagcaagttcgacgtggcggactggctggagtacttg
aacttgggggagcaccgggcgcgcttcctgcacaacgagatcgacgggtcgcacctgccc
gcgctcaccaaggaggattacatcgacctgggggtgacccgcgtggggcaccgcatgaac
atcgaccgggcgctgcggctcttcctcgagaggtga
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