Caloenas nicobarica (Nicobar pigeon): 136001246
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Entry
136001246 CDS
T11056
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04514
Cell adhesion molecule (CAM) interaction
cnic04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136001246 (LRRC4B)
04517 IgSF CAM signaling
136001246 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
136001246 (LRRC4B)
Cell adhesion molecules [BR:
cnic04515
]
Immunoglobulin superfamily
NGL family
136001246 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_R13L1-DRL21
YxzE
DUF6060
DUF7617
SelK_SelG
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
136001246
NCBI-ProteinID:
XP_065511421
LinkDB
All DBs
Position
39
Genome browser
AA seq
648 aa
AA seq
DB search
MALPGRMRPRPPPPLLLLLLLVPAAPAAAPTSCPAACSCSNQASRVICTRRELLEVPGSI
SVNTRYLNLQENHIQVIRTDTFKHLRHLEILQLSRNLVRKVEVGAFNGLPNLNTLELFDN
RLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFE
GLVNLRYLNLGMCNLKEIPNLTALVRLEELELSGNRLGRVRPGSFQGLGSLRKLWLMHAR
VAAVERNAFDDLKALEELNLAHNELASLPHDLFAPLHRLERVHLHHNPWRCDCDVLWLSW
WLRETVPSNTSCCARCHAPPALRGRYLGELEPGHFTCYAPVIVEPPADLNVTEGMAAELK
CRTGTAMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMVTNAAGN
TTASATLNVSAADAAAAAAAAAAATGYTYFTTVTVETTDAGGDDAAPQTPPAPTPGWDGG
STAAPPATRATGKPFTVPITAAAAGAGSGLQDLDDVLKTTKIIIGCFVAITFMAAVMLVA
FYKLRKQHQRHKHRGGPARAVEIVNVEDELGGGGGGGGGGGGAGGGAGDNRLALPALERD
HLDRYAAFAAHYANSGAGGLGKNPLLNSVHEPLLFKSPSKENVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcccggtaggatgcggccgcggccgccgccgccgctgctgctgctgctgctc
ctggtgccggcggcgccggcggcggctcccacgtcctgcccggccgcctgctcctgcagc
aaccaggcgagccgggtgatctgcacccgccgcgagctgctcgaggtgcccggcagcatc
tcggtgaacacgcggtacctcaacctgcaggagaaccacatccaggtgatccgcaccgac
accttcaagcacctgcggcacctggagatcctgcagctcagccgcaacctggtgcgcaag
gtggaagtgggggcgttcaacgggctgcccaacctcaacacgctggagctgttcgacaac
cgcctcaccaccgtccccacgcaggcgttcgagtacctgtcgaagctgcgggagctgtgg
ctgcgcaacaaccccatcgagagcatcccgtcgtacgccttcaaccgcgtcccctccctg
cgccgcctcgacctgggcgagctcaagcgcctcgagtacatctcggaggcggctttcgag
gggctggtcaacctgcggtacctcaacctgggcatgtgcaacctcaaggagatccccaac
ctcacggcgctggtgcggctggaggagctggagctgtcggggaaccggctgggccgcgtg
cgcccgggctccttccaggggctgggcagcctgcgcaagctgtggctgatgcacgcgcgc
gtggcggcggtggagcgcaacgccttcgacgacctgaaggcgctggaggagctgaacctg
gcgcacaacgagctggcgtcgctgccgcacgacctgttcgcgccgctgcaccggctggag
cgggtgcacctgcaccacaacccctggcgctgcgactgcgacgtgctgtggctcagctgg
tggctgcgcgagacggtgcccagcaacaccagctgctgcgcgcgctgccacgcgccgccg
gcgctgcgcggccgctacctgggcgagctggagcccgggcacttcacctgctacgcgccc
gtcatcgtggagccgccggccgacctgaacgtgaccgaggggatggcggccgagctcaag
tgccgcacgggcacggccatgacgtcggtgaactggctgacgcccaacgggacgctcatg
acgcacggctcgtaccgcgtgcgcatctcggtgctgcacgacgggacgctcaacttcacc
aacgtcaccgtgcaggacacgggccagtacacctgcatggtgaccaacgccgccggcaac
accacggcctccgccacgctcaacgtctcggccgccgacgccgccgctgccgccgccgcc
gccgccgccgccaccggctacacctacttcaccacggtcaccgtggagaccacggacgcc
ggcggcgacgacgcggcgccgcagacgcccccggcgcccaccccgggctgggacggcggc
tccacggccgccccgccggccacgcgcgccaccggcaaacccttcaccgtgcccatcacg
gcggcggcggccggcgcgggctcggggctgcaggacctggacgacgtcctcaagaccacc
aagatcatcatcggctgcttcgtggccatcaccttcatggcggccgtcatgctggtggcg
ttctacaagctgcgcaagcagcaccagcgccacaagcaccgcggcggcccggcccgcgcc
gtggagatcgtcaacgtggaggacgagctggggggaggcggcggtggcggcggcggcggc
ggcggcgccggggggggcgccggggacaaccggctggcgctgccggcgctggagcgcgac
cacctggaccgctacgcggccttcgctgcccactacgccaacagcggcgcgggcggcctg
ggcaagaacccgctgctcaactcggtgcacgaaccgctgctcttcaagagcccgtccaag
gagaacgtgcaggagacccagatctga
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