KEGG   Caloenas nicobarica (Nicobar pigeon): 136001320
Entry
136001320         CDS       T11056                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cnic03036]
    136001320 (KDM4C)
Enzymes [BR:cnic01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     136001320 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     136001320 (KDM4C)
Chromosome and associated proteins [BR:cnic03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    136001320 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 LBR_tudor Tudor_5
Other DBs
NCBI-GeneID: 136001320
NCBI-ProteinID: XP_065511548
LinkDB
Position
Z:61102562..61368217
AA seq 1071 aa
MAAVTSDSPPNPSCKIMTFRPSMEEFKEFNKYLAYMESQGAHRAGVAKVIPPKEWKPRKH
YDDIEDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFKQLANSDKYCTPRYVDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEGIEEWNIAHLNTILDVVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWID
YGKAAKLCTCRRDMVTISMDVFVRKFQPDRYQLWKQGKDLYTIDHTKPTPESTPEVKAWL
QRRRKIKNFPKCFQHTRSRSKKLKTPEDERVSAVVAGAEIIVTEAATDGFKVNEEPGKKV
RLVNTGVPSGQEENSSRMQLDQHLFDNVKVAGSILSDLLPSPIPVLEKTKLKDEDRTDSS
HPHFTHEDSVAYMPASDSCRKEESLKSQNQSVSSIVYHKSEEHASEAENTDKEENVSIED
DVSDLESCGSSLEHREVPVVKKDEEDGMETSSSAELERKKISKSWRHPLNKPPARSPMTL
VKQQATSDEELPETTLIEEEVQETETWARPLVYLWQTRVHNFNAEKEYNAACAEKEPHCA
VCTLLMPYYKPGNHDEESPTFGEANSAETLMTENEKTKPLIPEMCFIYSEENTENYPSNA
FIEEDGTSLLISCAKCCVRVHASCYGVPSHEIHNEWLCSRCRKEAWTAECCLCNLRGGAL
KQTTDKKWAHVICAIAIPEVRFGNVTERTPIDTSRIPLQRLKLKCIFCRQRIKKISGACI
QCSYGRCPASFHVTCAHAAGVLMEPDDWPYVVYITCFRHKINQNVRAKTCEKAITVGQTV
ITKHRNTRYYSCRVIGVTSQLFYEVVFDDGSFSLDTFPEDIVSRDCLRLGPPAEGEVVQV
KWPDGKLYGAKYLGTNTAHMYQVEFEDGSQIVMKREEIYTLDEELPKRVKARFSTASDMR
FEDTFYGADVILGEKKRQRVLSSRFRNEYVDDPGYRTFLKSSFQKKCQKGL
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggctgctgtcacctcagatagtcctccaaacccaagctgcaaaatcatgacgtttagg
ccttcgatggaagaattcaaggagttcaacaaatacttagcttacatggaatcacagggt
gctcatagggctggagttgcgaaggttataccaccaaaggagtggaagccaagaaaacat
tatgatgatattgaagatttggtgattcctgctccaattcagcagatggtcactggccag
tcggggctcttcacacagtacaacattcagaaaaagccaatgacagtgaaggagttcaag
cagctggccaacagtgacaaatactgcaccccaagatacgtagattacgaagatctggag
cgcaaatactggaagaacttgacttttgtggcaccgatttatggagcagatatcaatgga
agcatttatgatgaaggtattgaggaatggaatattgcccatcttaatacaatattggat
gttgtaggagaagactgtggaatttctattgagggtgtaaatacgccatatctatatttt
ggcatgtggaaaacaacatttgcatggcacactgaagacatggatctctacagtattaat
tatctccattttggggagccgaagtcatggtatgccattcctccggagcatgggaagcgg
cttgaaagactagctcaagggttcttcccaagcagttctcaaggatgtgatgcttttctt
cgccacaagatgactctgatttctccatcaatattgaagaagtatggaattccttttgac
aaggttacacaagaggcaggagaatttatgatcactttcccgtatggataccatgcagga
tttaaccatggttttaactgtgcagagtcaacaaactttgccaccatccgatggattgat
tatggaaaagcagcaaagctgtgcacttgtaggagagacatggtgacaatatccatggac
gtctttgtgaggaagtttcaaccagacagataccagctgtggaaacaaggcaaggattta
tacacaattgatcatacaaaaccaactcctgaatcaacacctgaagtaaaggcctggcta
cagagaagaaggaaaataaagaactttcccaagtgcttccagcacaccagatctcgatct
aaaaagcttaaaactccagaggacgagagagtatctgctgtggtagctggtgcagaaatc
atagtgactgaagcagctactgatggtttcaaggtcaatgaagaacctggaaaaaaagtg
agactggtaaacacaggagtgccttctgggcaagaagaaaacagtagtagaatgcagctg
gatcaacatttatttgacaatgtaaaggttgcaggaagcatcctttcagacttacttccg
agccctattcctgtactagagaaaacaaaactgaaagatgaggacaggacagattccagc
catcctcacttcacacatgaagattctgtggcctacatgcccgcttctgatagctgtaga
aaagaagagagtttgaaatctcagaatcagtctgtttcatccatagtataccataagtca
gaggaacatgcttctgaagcagaaaacacagataaggaggaaaatgtctcgatcgaggat
gatgtcagtgacctagaaagctgtggaagtagcttggaacacagagaagtgcctgttgta
aaaaaggatgaagaagatggcatggaaacatccagttcagcagaacttgaaagaaagaaa
atatctaagagttggcgtcatccactaaataaacccccagctagatctccgatgactctg
gttaaacagcaagcaactagtgacgaagaactgcctgagactaccttaattgaagaggaa
gttcaagagacagagacatgggccaggcctctggtctacctttggcagacacgagtacac
aatttcaatgctgaaaaagaatacaatgcagcttgtgcagaaaaggaaccacactgtgcc
gtttgcactcttctcatgccgtactacaagccaggcaatcatgatgaagaaagtcctact
tttggggaagcaaactcagcagaaacattgatgactgaaaatgaaaagactaaacctctt
attccagagatgtgttttatttatagtgaagaaaacactgaaaactatccatcaaatgcc
tttatcgaagaagatggaacaagtcttctgatttcctgtgcaaagtgctgtgtacgggtt
catgcaagttgctatggtgttccttctcatgaaatccataatgaatggttgtgctctcga
tgcagaaaggaagcctggacagccgaatgttgtctctgcaatttgagaggtggtgcatta
aagcaaactactgacaagaagtgggcacatgtaatatgtgcaattgccatcccagaagtc
agatttggtaatgtgacagaacgtacaccgatagacactagcagaatacctttgcaaaga
ttaaaattgaaatgtatcttctgccgacagagaattaagaagatctctggtgcctgcatt
cagtgttcatatggacgctgcccagcctccttccatgttacctgtgcccatgctgcagga
gtgctgatggaacctgatgactggccatacgttgtctacatcacatgtttcaggcacaag
atcaaccaaaatgtgagagctaaaacatgtgagaaggccattacagttgggcagacagtc
atcacgaaacataggaatacacggtactatagttgcagagtcataggagtgacatctcaa
cttttctatgaagtcgtgtttgatgatggctctttcagtctggatacttttcctgaagac
attgtaagcagagattgcctaaggctgggcccacctgcagagggagaggttgtccaagtg
aagtggcctgatggaaaactgtatggtgcgaagtatctgggaacaaacacagctcacatg
tatcaggttgagtttgaagatggttctcaaatagtaatgaagagagaagagatctataca
ctagacgaagaacttcctaagagagtaaaagcacgtttttctacagcctctgacatgaga
tttgaagacacattttatggagcagatgttatcttgggagagaagaagaggcagagagta
ctgagttcccgctttaggaatgaatatgtggatgatccaggttaccgcaccttcttaaaa
agctcattccagaagaaatgccagaaggggctataa

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