Caloenas nicobarica (Nicobar pigeon): 136001323
Help
Entry
136001323 CDS
T11056
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
136001323 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
136001323 (MYO5B)
04131 Membrane trafficking [BR:
cnic04131
]
136001323 (MYO5B)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
136001323 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
136001323 (MYO5B)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
136001323 (MYO5B)
mRNA cycle factors
P-body specific factors
136001323 (MYO5B)
Membrane trafficking [BR:
cnic04131
]
Others
Actin-binding proteins
Myosins
136001323 (MYO5B)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
136001323 (MYO5B)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
136001323 (MYO5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_22
nSTAND3
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
136001323
NCBI-ProteinID:
XP_065511556
LinkDB
All DBs
Position
Z
Genome browser
AA seq
1820 aa
AA seq
DB search
MSKELLVFMVSHSLCVSPQLYEYRIDLQGNELPFLRNPDILVGENDLTALSYLHEPAVLH
NLKVRFLESNHIYTYCGIVLVAINPYEQLPIYEQDVIYAYSGQNAGDMDPHIFAVAEEAY
KQMARDEKNQSIIVSGESGAGKTVSAKYAMRFFATVGGSASDTNIEAKVLASSPIMEAIG
NAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCA
SATLPEFKDLGLTCAEDFFYTSQGGDTSIDGVDDADDFEKTRRAFTLLGVKESHQTTIFR
IIAAILHLGNLEIQGERDGDACSVSSEDEHLANFCGLLGLEHGQMQHWLCHRKLVTTAET
YVKNMSVQQVLNARDALAKHIYAQLFNWIVQHINKALHTTVKQHSFIGVLDIYGFETFEV
NSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEGIPWTLIDFYDNQPCIDLIEAKLGIL
DLLDEECKVPKGTDQNWAQKLYDRHGTCQHFQKPRMSNTSFIVLHFADKVEYQSEGFLEK
NRDTVYEEQINILKASKYQMVADLFQDEKDAAPTTSMAKGTAKISVRSARPVIKAANKEH
KKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDEKLPFKFDPKRAVQQLRACGVLETIR
ISAAGFPSRWSYHDFFNRYRVLMKKRDLSKQDKKQICQTLLEDLIQDPDKFQFGRTKIFF
RAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRVKYKRLRRAAVVIQRYARGHRARRLAE
HLRRTRAAVVFQKQFRMLRVLRAFQSVRNATVTIQAFARGMFVRRIYRKILAEHKATILQ
KYARGWLARTRFRRVRGATIVLQCYYRRMKARQELKALKIEARSAQHLKKLNIGMENKVV
QLQRKIDEQNKEYKLLSEQLSLLTSTHSSEVEKLKKELVQYQRNQRGDDNQLVSLQEEME
QLRLELQKAHGERKVAEDTYAKEKGLLRKRISDLEEENALLKQEKEELNSRILCQSEDEF
ARNTVEENIQMKKELEEERSRYQNLVKEYSRLEQRYDNLRDEITIMKQTPGHRRNPSNQS
SLESDSNYPSISTSEIGDTEDVVQQVEEVGMDKAAMDMTVFLKLQKRVRELEQERKKLQN
QLEKKEQESKKAQVIETKTEVTSDREDFAYNSLKRQELESENKKLKNELNELRKVIAERA
TQNNSSNDVQESYSLLLNQLKSANEELEVRKEEVLILRTQIMKAAQQKETGKNTENIATN
ASWPNSDKHIDQEDAIEAYQGMCETNRKTEDWGYLNEDGELGLAYQGLKQVARLLEAQLQ
DQRREHEEEVEALKNEVDAMREELEKQQQAFLQSLQLPPEAQVEFGLQQEITRLTNENLD
LKELLEKLEKNEKKLKKQLKIYMKKVQDFEASQAAVPAERRRNERNMQVAVQRKEKDFQG
MLEYYKEDEPLLIRNLITDLKPQAVSATVPCLPAYILYMCIRHADYINDDQKVHSLLTST
INGVKKVLKKHSDDFEMTSFWLANTCRLLHCLKQYSGDAGFMTQNTAKQNEHCLKNFDLT
EYRQVLSHLSIQIYQQLIKVAEGVLQPMIVSAVLENESIQGLSGVKPMGYRNRSSSVEDG
DSSYSLDALIRQLNAFHGVMCNQGLDPEIVQQVFKQLFYMINAVALNNLLLRKDVCSWST
GMQLRFNISQLEEWLHGKNLQQSGAAQTLEPLIQAAQLLQLKKKTSEDAEAICSLCTSLT
TQQIVKILNLYTPVNEFEERVTVAFIRDIQTHLQERNDPPQLLLDFKHMFPVLFPFNPSS
ITMDSIHIPASLNLEFLNKV
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggagctgttggtttttatggtctcacattccctgtgtgtctctcctcagctc
tacgaatatcggattgatctccaaggaaacgagctgcctttcctgcgcaatcccgatatc
ctggtgggagagaatgacctgacggccctgagctacctccacgaacccgctgtcctccac
aacctcaaagtcaggttcctggagtccaaccacatctacacgtactgcggtatcgtgctc
gttgccatcaatccctacgagcagttgccaatctacgaacaagatgtcatctacgcgtac
agcggccagaacgcgggcgatatggacccgcacatcttcgccgtggcggaggaggcctac
aagcagatggccagggacgagaagaaccaatccatcatcgtgagcggggaatcgggcgcg
gggaagacggtttctgccaaatacgccatgcgcttcttcgcgaccgtgggcggttctgcc
agcgacaccaatatcgaagccaaagtccttgcgtcgagcccaattatggaggcaattgga
aatgccaaaacaacaaggaacgacaacagcagccgctttgggaagtacattcagatcggc
tttgataaaagataccacatcatcggcgccaacatgaggacgtatctgctggaaaaatcc
cgcgttgttttccaggcggaggacgagcgcaactaccacatcttctaccagctttgcgcc
tcggcgactcttccggaattcaaagacctcggcctaacgtgcgctgaagactttttctac
acgtctcagggaggcgacacgtccatcgatggcgtggacgacgccgacgactttgagaaa
accagacgtgccttcaccctgcttggtgtgaaggaatctcaccagacgaccattttccgg
ataatcgctgccattctgcacctcggcaacttggaaatccaaggggaacgggacggcgat
gcctgtagcgtctcgagcgaggacgagcacttggccaacttttgcggtttgctgggcctg
gagcacggccagatgcagcactggctttgccatcgcaagctcgtcaccacggctgagacc
tacgtgaagaacatgtccgtgcagcaggtgctcaatgcccgcgacgccttggccaagcac
atctacgctcagctcttcaactggatcgtgcagcacatcaacaaggccctgcacaccacc
gtcaagcagcactccttcatcggcgtgctcgatatctacgggtttgaaacttttgaagtg
aacagctttgagcagttctgtatcaactacgccaacgaaaagctccagcagcagttcaac
tcgcatgtgtttaagctggaacaagaagagtacatgaaggagggaatcccttggactctc
atcgatttctacgataaccagccctgcatagaccttatagaggcaaaacttgggatcttg
gacctgctggatgaagagtgcaaggttcccaaaggcaccgaccagaactgggcgcagaag
ctctacgaccgacacggcacctgccagcacttccagaagccccgcatgtccaacacgtcc
ttcatcgtcctccacttcgccgacaaggtggaatatcaaagcgagggattcctggaaaaa
aacagggacaccgtgtacgaggagcagatcaacatcctcaaagccagcaagtatcaaatg
gtcgctgacttattccaagatgagaaggatgctgcacccaccacttccatggcaaaggga
acagccaaaatcagtgtccgttctgccagacccgtgatcaaagctgccaacaaggagcac
aagaaaacagtgggacaccagttccgcaactcgttgcatttgctcatggagaccctgaac
gccaccaccccgcactacgtgcgctgcatcaagcccaatgacgagaagctcccctttaag
tttgatcccaagagagcggtgcagcagctgagagcttgtggagtgctggagaccatccgc
atcagcgccgccggcttcccctccaggtggtcctaccacgactttttcaatagatatcgt
gttctgatgaagaagagagacctctcgaagcaggacaagaagcagatctgccagaccctg
ttggaagatctcattcaggatccagacaagttccagtttggacgtaccaagatctttttc
cgtgcaggccaagtggcatatctggagaaactgcgagcagataagttcagagctgccacg
atcatgattcagaagacggttcggggttggctgcagagggtcaagtacaaaaggctgcga
cgagccgccgtcgtcatccagcgctacgcgcgtgggcaccgggcgcggagacttgccgag
cacctgaggaggacgagagcggctgtcgttttccagaagcagttccgaatgctgcgcgtc
ctcagagctttccaaagcgtccgcaacgcgaccgtcaccatccaggcctttgctcggggc
atgtttgtcaggaggatttatcgcaagatcctggcggaacacaaagccacgatcctccag
aagtacgcccgtggctggttggcccggactcgcttccgtcgggtcagaggtgccaccatc
gttctgcagtgctactaccggcggatgaaggccaggcaggagctgaaggcgctgaagatc
gaggcgcgctcagcgcaacacctgaagaaactcaacattgggatggagaacaaggtggtc
cagcttcaaaggaagatcgatgagcagaacaaggaatacaaacttctgagcgagcagctc
tctctgctcacgtccacgcactcctccgaggtggaaaaactgaagaaggagctggtgcaa
tatcagcggaaccagcgcggcgacgacaaccagctcgtcagcctgcaggaggagatggag
cagctgcggctggagctccaaaaagcccacggggagaggaaggtggcggaggacacctac
gccaaggagaagggcttactgagaaagcgaatatctgacttggaagaagaaaacgcgctc
ctgaagcaggaaaaagaggagcttaacagcaggatcctgtgtcaatctgaagacgaattt
gcccgaaatacagtcgaggaaaatatccagatgaaaaaagagctggaagaagagagatct
cggtatcagaacctggtcaaagaatattcgaggctggaacagagatacgacaacttgcgg
gatgaaattactatcatgaagcaaacgccgggacacaggagaaacccgtccaaccagagc
agtttggagtccgattccaattatccatccatatcgacctcggagatcggggacactgag
gacgtcgtacagcaagtggaggaggttggtatggacaaagcagccatggacatgaccgtt
ttcctaaagctccagaaacgagtgagggagctcgagcaggagaggaagaagctgcaaaac
caactggagaaaaaggagcaagagagcaagaaagcccaggtcatcgaaacgaagactgaa
gtgacttcggaccgtgaggattttgcgtacaacagtctgaagaggcaagagctggagtcg
gagaacaagaagctgaaaaacgaattaaatgagctgcggaaggttatcgcagagcgagca
acgcagaacaactcgtccaacgacgtccaggagagttacagcctcttgctgaaccagctg
aaatcggccaacgaggagctggaggtgcggaaggaagaggtgctcatcctgaggacgcag
attatgaaggcggcccagcaaaaagagacggggaaaaacacggagaacatcgccaccaac
gccagctggcccaacagcgacaagcacatcgaccaggaggacgcgatcgaagcttatcag
gggatgtgcgagacaaaccgcaagactgaggactgggggtatctcaatgaagatggagag
ctcggcttggcttatcaaggtttaaagcaagttgccaggttgctggaagcgcagctccag
gatcagagacgagagcacgaggaggaggtcgaagctctgaaaaacgaggtggacgcgatg
agagaagagctggagaaacagcaacaggcttttctgcagagcctgcagctccctccggag
gcccaggtggagtttggacttcagcaagaaattacacggctcaccaatgaaaatctggat
cttaaagaattgctcgagaagttggagaagaatgagaaaaagctgaagaagcaactaaag
atttacatgaagaaggtccaagatttcgaagcgtcccaagccgcggtaccggccgagagg
aggcggaacgagcgtaacatgcaagttgccgtccagaggaaggagaaagattttcagggc
atgttggaatattataaagaagatgagccgcttctcatccgaaacctcattacagatctc
aagccgcaggcggtgtctgcgactgttccctgccttcccgcctacatcctctacatgtgc
atccgacacgcggattatatcaacgacgaccagaaagtccactccttgctcacctccacc
atcaacggcgtcaagaaagtgctgaagaaacacagcgatgattttgagatgacgtcgttc
tggctggcgaatacgtgtcgcctcctgcactgtttgaagcagtacagcggagacgcgggt
tttatgacgcagaacacggcaaagcagaacgagcactgtctgaagaacttcgacctgacc
gagtatcgccaggtgctgagccacctctccatccagatctaccagcagctcatcaaggtc
gccgagggcgtcctccaacccatgatcgtgtccgcggtgctggaaaacgaaagtatccag
gggctttctggtgtcaaacccatgggctacaggaatcgctcctccagcgtggaagacggc
gacagctcctacagcttagacgcgctaattcgccagctgaacgcgttccacggcgtcatg
tgcaaccaggggctggacccggagatcgtgcagcaggtcttcaagcagctcttctacatg
atcaatgcagtcgccctgaataatctcctgctcaggaaggatgtttgctcgtggagcacg
ggcatgcagctcaggtttaacatcagccagctggaggaatggctgcacgggaagaacctg
cagcagagcggagcggcgcaaacgttggagcccttgatccaggcggcgcagctgctgcag
ctgaaaaagaaaacgtcggaagacgccgaggccatttgctccttgtgcacgtcgctcacg
acgcaacagattgtaaagatacttaatctctacactcctgtgaatgagttcgaagaacgt
gtgaccgtagctttcatacgagacatccagacgcacttgcaggagcgaaacgaccctccg
cagctgctcttggacttcaagcacatgttcccggttttgttccccttcaatccctcctcc
ataaccatggactccattcacatccccgcttcgctcaacttggaatttctcaataaagtc
tga
DBGET
integrated database retrieval system
