Caloenas nicobarica (Nicobar pigeon): 136001501
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Entry
136001501 CDS
T11056
Symbol
LRRC7
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 7
KO
K24055
leucine-rich repeat-containing protein 7
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
136001501 (LRRC7)
Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
136001501 (LRRC7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_2
LRR_13
PDZ_6
LRR_NXF1-5
LRR_EndoS
LRR_Zer-1
LRR_5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
136001501
NCBI-ProteinID:
XP_065511950
LinkDB
All DBs
Position
Z:108817331..108953529
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AA seq
1685 aa
AA seq
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MLSHLPALSPATPGRLGAPPRRPPXPLPIRQVTGPRNLSKVEKMAPAARKGGGPRAGGRC
EAAGGGRGEQERWLFGVSPAPAARGCLGPAGDAPAAGRPVGAATGGPACALLPAPAPASL
RTGPVPVPRGGRGRGTPPPPLPPGAAPLRPCAAAERSAGAQRDPPRRCHRRLCVWAPPRA
RRRDLRGGAGGRRSRGRGQPSAVPPQAPRPRTAAWPRMDARSRLHLCCLEMTTKRKIIGR
LVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQA
LRKLSIPDNDLSSLPTTIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKL
PDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLD
LGNNEFSELPEVLEQIQNLRELWMDNNSLQVLPGSIGKLKQLVYLDVSKNRIETVDLDIS
GCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNE
LESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKL
RVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQ
PRSDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEEKKEEEENAGKVKVEINLKRYPTPYP
EDLKNMVKSVQNLVGKTSHGVRPENSTPTVNSDQTVKDKYEHKWPMAPKEISVEDAYGHP
GSEMRIGELRPSIPETPLYPPKLVLLGKEKKESTDESEADKIHCLNNSVSSGTYSDYSPS
QASSGSSNAHVKMGSLQTTAKEAVNNSLWGNRLAQSFPQPLETKPLLSQREAAPAGNLPP
RTDRRPLSDAFADSWNDSSHYDNTGFVGEESAVENAGTNPLLSTKSRSTSAHGRRPLIRQ
DRIVGIPLELEQPALRNTHESEVPPPNPWQNWTRTPSPFEDRTAFPSKLESTPTTSPLPE
RKDHVKESPEMTSAFTPGIAWEYHDSNANRSLTNVFSHIHCRPDPSKSVISISKSTERLS
PMMRDLKTNKFKKSQSIDEIDIGTYKVYNIPLENYASGNDTVGAHERVDKLLGAEHGMLS
MSRSQSVPMLDDELLTYGSVKVQPQQKSSVTKKVYQFDQSFNPQGAVEVTAEKRIPPPFQ
LNPEYIPQQSKNLPQELVSPRAYRGYPPVEHMFSFSQPSVNEETVGVPFAGQGSRPGFLR
RADSLASSTEMSMFRRVSEPHELPPSDRYGRAPYRGAVERQSSISVPESQFLKRNGRYED
EHLSYQEVKAQTGSFPVKNLTQRRPLSARSYSTESYGTSQTRPVSARPTMAALLEKIPSD
YNLGNYGDKPSDNSDIKTRPTPVKGNESCAKMPADWRQQLLRHIEARRLDRTAAYKHNTV
SLGMLHSGGFPAMHAGRSMTLNLQPKSKFENQMLQELPLPKTPSQQSSVLDNGQEELSGS
GQWNPYPLGRRDVPPDTVTKKAGSHIQTLMGSQSLQHRSREQPYEGSMNKVTIQQYQPPL
PIQIPSAQSSRPPQTGRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQGNPF
KPSDKGIFVTRVQPDGPASSLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQ
RELTV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccatctcccagcgctttcccccgccacccccgggaggctgggagcccctccc
cgccggcccccgngtccccttcccattcggcaggttaccggcccccgcaacttatcaaaa
gtggagaagatggctcctgccgcaaggaaaggagggggaccgagggcgggcgggcgctgc
gaggcagccgggggaggccgaggggaacaggagcggtggctttttggcgtctcccccgcc
cccgcagcccggggatgcctcggccccgccggcgatgctccagccgcgggacgccccgtc
ggggcggcaacgggcggccccgcctgcgcgctgctccccgcaccggccccggcatcgctc
cgcaccggccccgttcccgttccgcggggagggcgcggccgcggcacgccccccccgccc
ctccctcccggagccgcgccgctccgcccctgcgccgccgcggagcgcagcgcgggcgcg
cagcgcgatccaccccgccggtgccaccgccgcctttgtgtctgggcgccgccccgtgcg
cggaggcgggacctgcgcggcggggccggcgggcggcggagccgcgggcgcgggcagccc
tcggcggtgcccccgcaggctccgcgcccccggaccgcggcttggccgcgcatggacgcg
cgttcccgcctgcacctatgctgcttggagatgacaaccaaaaggaaaattatcggccgc
ctggtgccctgtcggtgttttcgtggtgaagaagaaatcgtctcggtgttggattactcc
cactgtggcctgcagcaggtgccaaaggaggtttttaactttgagcggacgttagaggag
ctttacctggatgccaatcaaattgaggagctacccaagcaactgttcaactgtcaggct
ttacgcaagctgagtattccggacaacgacctctccagcctgcccaccaccattgccagc
ttagttaacctcaaagaactcgatatcagtaaaaatggaattcaagattttccagaaaat
attaaatgttgtaagtgtttaacgatcattgaagccagcgtcaatccagtctctaagctg
ccagatggcttcacacaactgctaaatttgacccagctctatctcaacgatgcctttttg
gagtttctcccagccaactttggaagacttgtcaaattgcgaattttggagttaagagaa
aatcacttgaaaactctaccaaagtcaatgcacaaactgacacaactggagaggcttgat
ctgggcaataacgaattctcggagctgcctgaggttctcgaacaaatacaaaatctaagg
gagttgtggatggacaataattctttgcaagtactacctgggtctataggaaagttaaaa
cagctcgtgtacctggatgtgtcaaaaaacaggatagaaactgttgatttggacatttcg
ggatgtgaaggactagaagatctcctgttgtcatccaacatgttgcagcaactgccagac
tccataggactcttgaaaaggctcacaactctaaaagtcgatgacaatcagcttacgatt
ctgcccaatgcaattggaaatttatctttattagaagaatttgactgcagctgtaatgag
ttggagtccttaccctccaccattgggtacctgcacaacctgaggacgttggccgtggat
gagaatttcctccccgaactgcccagagaaattggaagctgtaaaaacgtaacagtgatg
tctctgcgctctaacaagctggaatttcttcctgatgaaattggtcagatgcagaagctg
agggtgttaaatctgagcgataacagactgaagaatttaccattcacttttactaaactt
aaagaacttgcagcgttgtggctttctgacaaccagtccaaggctctcattccgctgcag
accgaggcgcacccagaaaccaagcagcgagtactgaccaactacatgtttccccagcag
ccccgcagcgatgaagatttccagtcagacagcgacagttttaaccctactttatgggag
gagcagagacagcaacgtatgactgttgcctttgaatttgaagaaaaaaaggaagaggag
gaaaatgcagggaaagttaaggttgaaataaatctaaaacgctatcccactccatacccg
gaggatttaaagaatatggtaaaatcagttcaaaatctggtgggcaaaacaagccatgga
gtccggcccgagaactcgacgccgaccgtgaacagcgaccaaacggtgaaagacaagtac
gagcacaagtggcccatggcacccaaggagatttcagtggaggatgcctatggacacccc
ggcagtgagatgcggataggggagctccgtccgtccatcccagagactccgctctaccca
cccaaacttgttcttctgggtaaagagaagaaagaatctacagatgagtctgaagcagat
aagatccattgtctgaataacagcgtttcctcaggcacttactcagactattccccttcc
caggcttcctcagggtcctccaacgcgcacgttaaaatgggctccttgcagacaacggct
aaagaagcagtgaataactctttgtggggaaacaggctggcacagtccttcccgcagccc
ctggaaacaaagccattgctgagccagcgggaagcggctccggccgggaacctgccgccg
cgcacggacaggcgcccgctcagcgacgccttcgccgacagctggaacgacagctcgcac
tacgacaacaccggcttcgtgggcgaggagagcgcggtggagaacgccggcaccaacccc
ctcctgagcaccaaatccagaagcacgtcggcgcacgggcgcaggccgctgatcaggcag
gacaggatagtcggcattcccctggagctggagcagcccgcgctcagaaacacacacgaa
tctgaagtgcctcctcccaacccttggcaaaattggacccgaacccctagtccttttgaa
gacaggacagcgtttccttccaaactggaaagcacccccaccaccagccctttgcctgag
cggaaagatcacgtcaaagagtctcctgaaatgactagcgctttcactccagggatagcg
tgggaataccacgattcgaatgctaacagaagcctcacaaacgtcttttcccacatccac
tgtcgcccggatccttccaaaagtgttatttcgatcagcaagagtacagaacggctttct
ccgatgatgagggatttaaaaactaacaaatttaagaagtcgcaaagtatcgatgagata
gacatcggtacgtacaaagtgtataatatacccttagaaaactatgcatccggtaacgat
actgtaggagcccacgagagggtggacaagctgctgggcgcggagcacggcatgctgagc
atgtcccgcagccagtccgtccccatgctggacgacgagctgctgacctacggcagcgtc
aaggtgcagccgcagcagaagtcgtccgtcaccaagaaagtctaccagttcgaccaaagc
ttcaacccgcagggagcggtggaggtgacggcggagaagaggataccgccgcctttccag
ctcaaccccgagtacattccccagcagagtaaaaacctgccgcaggagctggtcagcccc
cgggcgtaccgcggctacccccccgtggagcacatgttctccttctcccagccttccgtc
aacgaggagacggtcggtgtcccctttgcgggccagggctctcggccggggttcttgagg
agggcggattcgttggccagctccaccgagatgtccatgttcaggagagtcagtgagccc
cacgagctgccgcccagcgacaggtacggccgggctccgtaccggggggccgtggagcgc
cagagcagcatctcggtccccgagtctcagttcctcaagaggaacggcaggtacgaagac
gagcatctttcctaccaagaagtgaaagcccagactggaagctttccagttaaaaacctc
acacaaaggaggccgttgtctgcaagaagctacagtacagagagttacggcacgtcccaa
accaggccggtttcagcgaggccaacaatggcagctctgctggaaaagattccgtcagac
tataacttgggtaactatggcgacaagccttccgataacagtgatataaagacaaggcct
acccctgtgaagggaaatgagagctgtgctaaaatgcccgctgactggagacaacagcta
cttagacatatagaagctagaaggttagacaggaccgctgcttacaaacacaacacagtt
agccttggcatgctgcactctggagggtttccagccatgcatgccggcagaagcatgact
ttaaacttgcagcctaaatctaaatttgaaaaccaaatgcttcaagagctacctctaccg
aaaaccccgtcgcagcagagcagcgtcctggacaacgggcaggaggagctgagcggcagc
gggcagtggaacccctacccgctgggccggcgggacgtgccgcccgacaccgtcaccaag
aaggcaggtagccacatccagacgctgatgggctcgcagagcctgcagcaccgcagccgc
gagcagccctacgaggggagcatgaacaaggtgaccatccagcagtaccagcccccgctg
cccatccagatcccctcggcgcagagctcccggcccccgcagacgggacgctgcctcatc
caaaccaagggccagaggagtacggatgcctatcaggagcagttttgtgtgagaatagag
aagaatcccggccttggttttagtatcagtggtggaataagcggacaaggaaatccattc
aaaccttctgataagggtatctttgttactagggttcagcctgacgggccagcgtccagc
ctgctccagcctggcgacaagatcctccaggccaacggacacagttttgtacatatggaa
cacgagaaagctgtattactactgaagagtttccagaatacagtagacctagttattcaa
cgtgagcttactgtctaa
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