Caloenas nicobarica (Nicobar pigeon): 136001533
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Entry
136001533 CDS
T11056
Symbol
LRRC8C
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnic04040
]
136001533 (LRRC8C)
Ion channels [BR:
cnic04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
136001533 (LRRC8C)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
136001533
NCBI-ProteinID:
XP_065512019
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Position
Z:complement(93091332..93114457)
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AA seq
802 aa
AA seq
DB search
MIPVTEFRQFSEQQPAFRVLKPWWDVFTDYLSVAMLMIGVFGCTLQVMQDKIICLPKRVQ
PCQNQSNSSNVFNTIPDTTPLPPLKPSTPPATVEMKGLKTDLDLQQYSFINQVCYERALH
WYAKYFPYLVLIHTLVFMLCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGE
DSEEKDNRKNNINKSNTIQPNAEGTLVKTQSLKSIPEKLVVDKGTPGALDKKEGEQAKAL
FEKVKKFRLHVEEGDILYVMYVRQTVLKVIKFLIIIAYNTALVSEVNFTVVCNVDIEDMT
GYKNFCCNHTMAHLFSKLSYCYLCFVSIYGLTCLYTLYWLFYRSLKEYSFEYVRQETGID
DIPDVKNDFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNNEWTADKLRQRLQTN
SHSHLELQLFMLSGLPDTVFEITELQSLKLEIINNVMIPATIAQLDNLQELSLHQCSVKI
HSAALAFLKENLKILSVKFDDMRELPHWMYGLRNLEELYLIGSLSHDISKNITLESFREL
KSLKVLYIKSNLSKIPQSAVDVSSHLQKLCIYNDGTKLVMLNNLKKMVNLTQLELVHCDL
ERIPHAVFSLLSLQELDLKENNLKSIEEIVSFQHLRKLTILKLWYNSITYIPEHIKKLTS
LERLSFSHNKIEVLPSHLFLCNKIRYLDLSYNDIRFIPPEIGVLQSLQYFSITCNKVESV
PDELYFCKKLKTLKIGKNNLSVLSPKIGNLVFLSHLDIKGNHFEILPPELGECRALKRTG
FTVEDTLFETLPSDVREQMKAE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgtgaccgagtttcgccagttctcggagcagcagccggcgttcagggtgctg
aagccctggtgggatgtgttcacagactatctctccgtcgccatgctgatgatcggtgtg
tttgggtgcacgttacaggtcatgcaagacaagataatatgccttccaaagcgcgtacag
ccttgccagaaccaatctaatagttccaatgtgtttaacacaatcccagatacaaccccc
cttcctccactcaagccatccacccctccagctacagttgagatgaaagggctgaagact
gatttggaccttcagcaatacagctttataaatcaggtgtgctacgagcgtgctctgcac
tggtatgccaagtacttcccttacctcgtccttatacacacactggtcttcatgctgtgt
agtaacttctggttcaaattccctggatcgagctccaaaattgaacacttcatttcaata
ctcgggaagtgttttgattctccctggacaacaagagccttatccgaagtgtctggggaa
gactctgaagagaaagataacaggaagaacaacataaacaagtctaatactatccagcca
aacgctgaaggcactttggtcaagacacagtctttaaaatcaatccctgaaaagttagtt
gtggataagggaacacctggggcattagataagaaagaaggtgagcaggccaaagcactt
tttgaaaaggtgaagaaattcagactgcatgttgaggagggtgatatactctatgtcatg
tacgttcgccagactgtacttaaggtcattaaattccttattattattgcttacaacaca
gcacttgtctcagaagtcaattttacagtagtctgtaatgttgatattgaagacatgaca
ggatataagaatttctgctgcaatcacacgatggcacatctgttctctaaactttcttac
tgctacctgtgctttgtaagcatctacggcctcacatgcctttacacactgtactggttg
ttctaccgctcactgaaagaatattcttttgaatatgttcggcaagagacaggaatcgat
gatatcccagacgtcaagaatgactttgcttttatgcttcatatgattgatcagtatgat
cctctctattccaagaggtttgctgtcttcctgtctgaggtcagtgaaaataagctgaaa
cagctgaacctaaacaacgagtggactgcagataaactgcgacagaggctacagacaaac
tctcacagccatttggagctacagcttttcatgctctctggactaccagacacagttttt
gaaattactgagctgcagtcattaaaacttgaaataattaataacgtaatgataccagca
accattgcacagctggacaatctccaagagctctcgttgcaccagtgctctgtgaagatc
cacagtgctgccttggcatttctgaaggagaatctcaagatcttgagtgtgaagtttgat
gacatgagagaacttccacattggatgtatggcctcagaaatttggaagagctctattta
attggctccctaagtcacgatatttccaaaaacattacattggagtcttttcgagaactt
aaaagccttaaagttctttacataaaaagtaatttgtccaaaatcccacaatctgctgtc
gatgtctcaagtcacctgcaaaaattgtgcatctataatgatggcactaagttagtgatg
ctcaacaacctgaagaagatggtcaacctgacacagctggaattggttcattgtgattta
gagcgcatacctcatgcagtcttcagccttctcagccttcaggagttggatctaaaggaa
aacaacctcaaatccattgaagaaatagtaagttttcaacatctgcgaaaactgacaatc
ctaaagctgtggtacaacagcataacctacatcccagagcatataaagaagctcactagt
ctcgagcggctttccttcagccataacaaaatagaggttcttccatcccacctattccta
tgcaacaaaatcagatatttggatttgtcttacaatgacattcgctttatcccacctgaa
ataggagttctgcagagtttacaatacttttccattacttgcaacaaagtggagagcgtg
ccagatgaactctacttttgcaaaaaacttaagactctgaaaatcgggaaaaataacttg
tcagtcctttcacctaaaattggtaatttggtattcctctcccacttggatattaaaggc
aatcactttgaaatcctcccacctgagcttggtgaatgccgagctctgaagcggactggt
ttcactgtagaggacaccttgtttgaaactttgccttctgatgtcagggaacagatgaaa
gctgaataa
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