KEGG   Caloenas nicobarica (Nicobar pigeon): 136001668
Entry
136001668         CDS       T11056                                 
Symbol
WDR36
Name
(RefSeq) WD repeat-containing protein 36 isoform X1
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    136001668 (WDR36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cnic03009]
    136001668 (WDR36)
Ribosome biogenesis [BR:cnic03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    136001668 (WDR36)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_HPS5 PEP5_VPS11_N NBCH_WD40 Beta-prop_WDR19_1st WD40_RFWD3 SGL UPF0738
Other DBs
NCBI-GeneID: 136001668
NCBI-ProteinID: XP_065512299
LinkDB
Position
Z:complement(37910484..37945732)
AA seq 890 aa
MAGEGGGLFAGFRVLGRFSGHVPHVLRYHGRHREFYVASAVGRSVHTYNVKKLGIVAVSN
ALPQDITCLAADRMLIFASYDNILHAFARNKEVVHTYEGHKAKIHLLQPFGDHVISVDID
NVLIVWNIESEEEYLQVDFDKATFAVSAILHPSTYLNKILLGSEQGSLQLWNIRSNKLLY
SFPGWHLKVTTLEQAPAVDVVAVGLVSGHIIVHNIKFDETLMKFQQDWGPITAISFRTDG
HPVMAAGSPVGHIALWDLEEKKLMCQMEDAHSTAIAGMSFVPGEPLLITNGADNAIRVWI
FDGPGGTGRVLRSRMGHSAPPTKIRYHGQNGEQILSAGQDGTLQSFSTVHEKFNKSLGRG
SINKKKSKKKGLKLDTMVLPPITVFASEVAHQSDWDGIVACHQGYITCTTWNYQKTSMGA
HKLRPEEFSKHKPVDIYATAVDITSCGNFAVIGLSTGQLDVYNMQSGIHRGRYGKERAHE
GAIRGIAVDGLNQLIITAGSEGLIKFWKFKTKDLVYSTELSSSPSGILLHRDSGILGIAF
DDFSISVLDIETRKIVRTFSGHHGRINDMAFSPDGRWLITSSMDCTIKTWDLPSGCLIDC
FLVDSAAVSLTMSPTGDFLASTHVDDLGIYLWSNRFLYSLVSLRPLPADYEPSMVTRPST
CPVQDVDMEGDEETCDEIIEYASPEQLGEQLVTLSSLPESRWKNLLSLDVIKKKNKPREP
PKVPKSAPFFIPTVPGLIPRYSAPEEEKDTQSKVVNLGVLAQKSDFYIHLEEALSTNEYT
APLNLLKSFGPSNIEIELRGLAPEGGGSMEVMQSFLRMIGMMLNKKYNFELAQAYLALFL
KLHLKILSSEPILLEEVSRLSTQIEETWIHLQTLFNQSLCVLTYMKSALL
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggcgggtgagggcggcgggttgttcgccggtttccgcgtgctcggccggttcagcggc
cacgtcccgcacgtgctgcgctaccacggccgccaccgcgagttctacgtggccagcgcc
gtcgggcgcagcgtccacacctacaacgtgaagaagcttggtattgttgctgtgagtaat
gctttgccacaagacattacatgtttggcagcagaccgcatgttgatctttgcttcatat
gacaatattctccatgcttttgccaggaacaaagaggtggttcatacctatgaaggtcac
aaagcaaagatacaccttctgcaacctttcggtgatcatgtaatctctgtggatattgat
aatgttcttattgtctggaatatagagtcagaagaggagtatcttcaagtggattttgat
aaggctacttttgcagtttctgcaattctgcatcccagcacctacttgaataaaattctc
cttgggagtgagcaaggaagcttacagctatggaatataagatccaacaaactcttatat
tcgtttccaggatggcacttaaaagtcacaactcttgaacaagctccagcagtggatgtt
gttgcggttggtcttgtatcgggtcacataattgtacataatattaagtttgatgaaact
ctgatgaagtttcagcaagactggggtcccatcacagcaatatcttttcgtacagatgga
cacccagtaatggcagctggtagcccagttggacacattgctttgtgggatctagaagaa
aagaaacttatgtgtcagatggaagatgcccattccacagcaatagctggtatgtcgttt
gtccctggagagccacttcttattactaatggtgctgataatgctatacgggtgtggatt
tttgatggacctggtggtacaggacgtgtactgagaagccgaatgggacatagtgcacca
ccaacaaaaatcagataccatgggcaaaatggagagcaaattcttagcgcaggtcaagac
ggaacattgcagtctttttcaacagtgcatgaaaagttcaataaaagtttaggacgtggt
tcaattaacaaaaagaaatcaaaaaagaaaggtctgaagcttgatacgatggtacttccg
ccaattacagtctttgcttcagaagtggcacatcagagtgactgggatggcattgttgcc
tgtcatcaagggtatataacctgtacaacctggaactatcagaaaacttccatgggagct
cataaactaaggccagaagaatttagcaaacacaaacctgttgatatatatgcaacagca
gttgacattacctcatgtgggaactttgctgtaattgggttgtcaactggacagttagat
gtgtataacatgcagtctggcattcacagagggcgttatggcaaagaaagagcacatgag
ggggccattagggggatagcagtggatggactaaaccagctgataatcacagctggtagt
gaaggattaattaaattttggaaattcaaaactaaagatctagtttactccactgagctt
tcttcttctccaagtggaatactgcttcacagagacagtggtattctgggaattgccttt
gatgacttcagtattagtgttttggatatagaaaccaggaagattgtcaggacattctca
ggacaccatggacggattaatgacatggctttcagtcctgatggtcgttggctgataact
tcatcaatggactgtaccattaagacttgggaccttccctctggatgcctcatagattgt
tttttggtagactccgcagctgtgagccttactatgtctcctacaggagattttctagct
tcaacacatgtggatgatcttggaatttatttgtggtcaaaccgttttctgtattcactt
gtctctttacggccgcttcctgcagattatgagccttctatggtaacacgccctagcacc
tgccctgtgcaagatgtggatatggaaggagatgaagaaacgtgtgatgaaattatagaa
tatgcctcacctgagcaattgggagaacagctggtgaccctttcctcgttaccagaatca
agatggaaaaatctcctcagtcttgatgtaatcaagaaaaaaaataaaccaagagagcca
ccaaaagttcccaagtcagctcctttcttcattccaacagttcctggtcttataccccga
tatagtgctccagaggaagaaaaagatacgcagtcaaaggtagtaaaccttggagtactg
gcacagaaatctgatttctacattcatcttgaagaagccctgagcactaatgaatataca
gcaccacttaacttactgaaaagctttggaccatcgaatattgagatagaactaaggggt
ttggcccctgaaggtggtggctccatggaggtgatgcaaagctttttgagaatgattgga
atgatgctgaacaagaagtacaacttcgaacttgctcaggcataccttgcattattttta
aagttacatcttaagattctctcatcagaaccaatcctattggaagaagtatccagattg
tcaacgcaaattgaggaaacttggattcatttgcagactctcttcaatcagagtctttgt
gtgttaacatatatgaagagtgctttgctgtaa

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