Caloenas nicobarica (Nicobar pigeon): 136001773
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Entry
136001773 CDS
T11056
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136001773 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
136001773 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
136001773 (VPS36)
Membrane trafficking [BR:
cnic04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
136001773 (VPS36)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136001773 (VPS36)
Exosomal proteins of colorectal cancer cells
136001773 (VPS36)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
DUF1351
Xre-like-HTH
V-ATPase_G_2
DUF5847
Motif
Other DBs
NCBI-GeneID:
136001773
NCBI-ProteinID:
XP_065512486
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Position
1:186910603..186935472
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AA seq
386 aa
AA seq
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MDRFSWTSGLLELGETLVVQQRGVRLCDGEEKVKFDMGVLLLSTHRLIWRDQKNHECCFA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGEIEFYR
RLSEEITQRRWENMPTGQTIQVNKDPQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLAGILQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVASALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttctcgtggaccagcggcctgctggagctgggggagacgctggtggtgcag
cagcgcggcgtgcggctctgcgacggggaggagaaggtgaaattcgatatgggagtatta
ctacttagcacacacagactaatctggagggatcagaagaatcatgagtgctgctttgct
gtacctctgtctcagatcgtctttatcgaagagcaagcagctgggataggaaaaagcgcc
aaaatagtagttcatcttcatcctgcttcttcaaacaaagagcctggtccattccaaagc
agcaaatattcctacatcaaactttctttcaaagagcatggggagattgagttctataga
cgattatcagaagaaattacacaaaggagatgggagaacatgcctactggtcagaccatt
caagttaacaaggatccacaggcaggaagaataagagctgtaggaattgtagggatcgaa
aggaaattagaggaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagcaaactaatggagaaggctaaggaaatggtggagttatctaagtcaatagctaat
aagatcaaagaaaaacaaggtgacatcactgaggatgagactattaggttcaagtcctat
ctgttgagtatgggcatagctaatccagttactagggaaacacatggatctggtacccat
taccacatgcaactggcaaagcaactagccggaatactgcagacaccactagaggagcga
ggagggatcatgtcgcttacagaagtgtactgtctggtaaatcgcgcacgaggattagag
ttgctgtcaccagaagatttagtaaatgcttgtaagatgctggagtcactgaaattacca
ctaaggcttcggatatttgacagtggtgtgatggtgattgaactccagtctcataacgaa
gaggaaatggtagcttctgctttagagacagtatctgaaaagggttccctcacagctgac
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacacagagctaa
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