Caloenas nicobarica (Nicobar pigeon): 136001884
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Entry
136001884 CDS
T11056
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
136001884 (ZFR)
Spliceosome [BR:
cnic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
136001884 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
136001884
NCBI-ProteinID:
XP_065512672
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Position
Z:complement(19316775..19360639)
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AA seq
1071 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTG
TTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKAS
QNTNNSSTSSRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEP
NVVTQATSSTSTSASKPTASASNIATSNSTVNSSVASSAVKILTPTANTPLNTASNNKTS
STAANVAVKKISTPKINFVGKYRSGNKLQTTGSKLEEMKSAESVKTTPAATVQTQEVKAD
TAAEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKG
RRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYE
EDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSD
DRYVMTKHATIYPTEEELQAVQKIVSITERALKLVSDSMTDLEKSKNKEGDDKKDGSKDR
ALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIK
CAVSEAAIILNSFVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDAL
AALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQS
PGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAF
RQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttcgttcacctatgtgcccagccggctgggagaagat
gccaaaatggccaccggcaactactttggattcacccatagcggggctgctgcccagtat
agccagcagccagcttcgggtgtagcctattcccatccaactacagttgctagctacacc
gttcaccaggcaccggttgctgcacacaccgtgactgcagcctacgctccagcagcagct
acagtcgcggtagccaggcctgccccggtagccgttgcagctgccgcaacagctgccgcg
tacggcggctaccctacagcacacacagccacggactatggttacacacagaggcaacaa
gaagccccaccgccaccacctcccgtcactacgcagaattaccaggattcctattcttat
gttcgatctactgccccagctgtagcttatgacagcaaacaatactatcaacagccgaca
gcaactgcagcggctgtggctgctgctgcccagcctcagccttcagtagctgagtcgtac
taccagacagctccaaaagcgggatatagccagggggcaactcagtatacccaagcccag
caaacacgacaagtgacagctataaaacctgcaactccaagtccagcaacaactacattt
tctatatatccggtatcttctactgtgcagccagtagcagctgcagctactgttgttcca
tcctatactcaaagtgcaacgtacagtacaacagcggttacttactctggtacctcttat
tctggctatgaagctgcagtgtattcagctgcatcgtcctattaccagcagcagcagcag
caacagaaacaggcagcagcagcagctgctgctgctgctgcaaccgctgcttggacaggg
accacctttacaaaaaaggcaccattccaaaataagcaactgaaaccaaaacaacctccc
aaaccaccccagatccactactgtgatgtttgtaagatcagctgtgctggaccacagact
tacaaagaacacttagaaggccagaaacacaagaagaaagaagcagcattaaaagcttca
cagaacaccaataacagcagcacttcttctcgtggaactcagaatcagttgcgctgtgag
ctttgtgatgtgtcttgtacaggggcagatgcttatgctgcccatatccgtggagccaag
catcagaaagtagtaaagttgcacacaaaacttggcaaacccattccttcaactgaacca
aatgtggttacccaagctacttcctcaacatccacatctgcttccaaaccaactgcctct
gcttcaaatatagcaactagcaacagtactgtgaactcctctgttgcatcctctgcagtg
aaaattcttactcccacagcaaatacaccacttaacactgcgtccaacaacaaaacatct
tcaactgctgctaatgtagctgtaaagaaaatatctacaccgaaaataaactttgttggc
aagtacagaagtggcaataagctgcagacaacaggaagtaaactggaagaaatgaaatca
gccgaaagtgttaaaacaactcctgctgctacagtacaaacacaggaagtaaaagccgac
acagcagctgaaccagtgactcccacaactcttgctgccttgcaaagtgatgtccagcca
gtgggccatgactatgtggaggaggtaagaaatgatgaaggaaaggtgatccgctttcac
tgtaaactttgtgaatgcagctttaatgatcctaatgccaaggagatgcacttaaaaggg
aggaggcacagacttcagtacaagaaaaaagtaaacccagacttacaagtagaagtaaag
cccagtattcgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaaagaa
gaatactggagaaggcgagaagaggaagaacgctggaggatggaaatgaggcgatatgaa
gaagacatgtactggaggagaatggaggaagagcagcatcactgggatgaccgccgcaga
ataccagatggaggatatcctcacggtcctccgggacctctaggcctgctgggtgttaga
ccaggaatgcctcctcagccccaaggaccagctcctctacgccgacctgactcttctgat
gaccgctatgtgatgaccaaacatgccactatatatccaacagaagaggaacttcaggca
gtccagaaaattgtttctattactgagcgtgctttgaaacttgtttctgacagtatgact
gatcttgaaaaaagcaagaacaaagagggagatgacaaaaaagatggcagtaaagacaga
gctttgaaaggagttttgcgagtaggcgttttggccaaaggtttgctactccgtggagac
cgaaatgttaatcttgttttgttatgtgctgagaagccttcaaagacgttactcagtcgt
attgctgaaagtcttcccaagcagcttgcagtaataagtcctgagaaatacgatatcaag
tgtgcagtgtcagaagcagcaataattttaaattcgtttgtggaacccaaaatgcaagtt
actatcacactgacatctccagtcattcgggaggagaacatgagggatggagatgtaacc
tcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctg
gctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtg
attatcatacgtattcttcgtgacctctgtcagcgagttccaacttggtctgattttccg
agctgggctatggagttgcttgtggaaaaagcaattagcagcgctactggacctcagagt
cctggggatgcactgaggagagtttttgagtgtatatcttcaggaatcatccttaaaggt
ggtcctggccttttggacccttgtgaaaaagatccttttgatacacttgctgtaatgaca
gatcagcaacgagaggatattacttcgagtgcacagtttgcactgagactccttgcattc
cgtcaaatacacaaagttttaggaatggatccgttaccacagatgaatcaacgcttcaac
atccataataatcgtaaaaggagaagggacagtgatggggttgatggatttgaagcagaa
ggaaaaaaagacaaaaaagattatgataacttttaa
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integrated database retrieval system
