Caloenas nicobarica (Nicobar pigeon): 136001996
Help
Entry
136001996 CDS
T11056
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
136001996 (RNF180)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136001996 (RNF180)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136001996 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
136001996
NCBI-ProteinID:
XP_065512855
LinkDB
All DBs
Position
Z:29482129..29563779
Genome browser
AA seq
562 aa
AA seq
DB search
MSNQEADVLRCWRCRKYIANSVCLAKCHGKEPSDTSQPSAAAQESCNVWHVDLEAIPEWV
KSVIEKAQWTIGKLHCPFCEACLGGFNFVCNTKCSCGQLVNIHFCKSRTDYQPAFSVKFT
KSSGKQLPLLEIQSGFSKNTCHEVVTSALEIKNQGLSYISRNNKGTGRLIEALCLEVKAP
SFEMKSKTLPIKALDQKRNLSASFPMNDVHTVKPFHRRSHSLDLNIRETFILSPVLYEAC
SMGTIYHVQNKYTQSGLRLEPNRKGGCAFQDQCSSSADKLQKKFRVTSFTLVHRDTESEC
DFEATGQSSGGAIEDVSPSLMNLSSSMSVVEEEHHIMPVDLVQPTSISFNQKLNKRERNK
LKSLRRKQRRRERWLQKQTANDNLNTDDEHELRGDKESYICAVCLDVYFNPYMCYPCHHI
FCEPCLRMLAKDNPASTPCPLCRTTIARVFFQTELNNSTKSFFPTEYLKLKENFQKSNSA
KWPLPSCKKAFRVFEAGFQRRSDTVTRRHFPHAAYRMDYMDFEDDSRGWRFDMDMVIIYI
YSVNWVIGFIVFCFLCYFFFPF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaagaggctgatgtgctgcgttgctggaggtgtagaaaatacatagcaaat
tctgtttgccttgcaaaatgtcatggaaaagaaccatctgacacatcacaaccttcagct
gctgctcaggagtcttgcaatgtatggcatgtggacttagaagctattccagagtgggtg
aaatctgtcattgaaaaggcacagtggacaattggaaaactgcactgtccattctgtgag
gcctgcttagggggctttaactttgtttgtaacacaaaatgttcctgtggacagttagta
aatatacatttctgcaaaagtcggactgactatcagccagctttctctgttaaattcaca
aaatcatcaggaaagcagttacccctccttgaaattcagtctggtttcagcaagaatacc
tgccacgaagtggtaacttcagctttggaaattaaaaatcaagggctttcatacatttcc
agaaataataaaggtactggaagattaatagaagcactttgtctagaagtaaaagctccc
agctttgagatgaaaagtaaaacacttcccataaaggcattagatcaaaaaagaaatctt
tctgcttcctttcctatgaatgatgtacacactgtaaagccttttcacagaagatcacat
agtttggatttaaatatcagagagacatttattttgtcacctgtgttatatgaggcttgc
agtatgggaacaatttaccatgtccaaaacaaatacacacaaagtggcttacgattagag
cccaataggaaaggtggttgtgcttttcaggaccaatgtagttccagtgctgacaaacta
caaaaaaagtttcgagttacttcctttacattagtacatagagacacagaaagtgagtgt
gattttgaagctactggacaatcctctgggggtgccattgaggatgtgtcaccttctttg
atgaacctttcttcgtctatgagtgttgtagaagaggaacatcacatcatgcctgttgat
cttgtgcagcccacaagtatttccttcaaccaaaagctgaataagagagaaagaaacaag
ttgaaaagcttaaggagaaaacaaaggcggcgagaacggtggctacagaagcaaactgca
aatgataacctgaatacagacgatgaacatgaactaagaggagataaagaaagctatatc
tgtgcagtgtgcctggatgtttatttcaatccttacatgtgctatccatgccaccacatc
ttctgtgaaccttgcttaaggatgcttgccaaagacaatccagccagcactccatgtccc
ctgtgccgcactacgattgccagagtctttttccaaacagaattgaacaactcaaccaaa
tcttttttccctacggaatatttgaagttaaaagaaaactttcaaaaatcaaattctgca
aaatggcctctaccaagctgcaagaaagcctttagagtttttgaagcaggttttcaaaga
cgctcagatactgtaacaaggaggcatttcccgcatgctgcttacaggatggactacatg
gacttcgaggacgatagccgtggatggcggtttgatatggacatggtgataatctacatt
tattcagtcaactgggtaataggatttattgtgttctgttttctttgttatttctttttc
cctttttag
DBGET
integrated database retrieval system
