Caloenas nicobarica (Nicobar pigeon): 136002015
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Entry
136002015 CDS
T11056
Symbol
ZSWIM6
Name
(RefSeq) zinc finger SWIM domain-containing protein 6 isoform X1
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cnic03037
]
136002015 (ZSWIM6)
Cilium and associated proteins [BR:
cnic03037
]
Other cilia and associated proteins
Stereociliary proteins
136002015 (ZSWIM6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
136002015
NCBI-ProteinID:
XP_065512889
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Position
Z:28453241..28573270
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AA seq
1160 aa
AA seq
DB search
MAERGQLPPAAKRLCCRPGYGSGCRPGQRAGGAGPGSGVLCAGPSSAAAAAALGLLPLGK
TQSPESLLDIAARKVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTG
AEDPTAAPGGAATAPGGAADAAAAADENRLPFRRGIALLDGGCVDNVLQVGFHLSGTVTE
PAMQSEPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPI
SETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASI
DDENCWHLDEEQVQEQVKIFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITE
QFMADPRLLLWRQQGTTMTDKYRQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSV
DVCPWEDGNHGNELPNLTNALPQGANANQDSPNRPHRTVFTRAIEACDLHWQDSHLQHII
SSDLYTNYCYHDDTENSLFDSHGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNT
LRRQQQKQLEMFRAQKKELLHRGVTSITNLEGWVGHPLDPIGTLFSSLMEACRVDDESFH
GFSDFMENMGQCKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYAQEKV
CRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFT
SLLPHDAELAYKTALRAMRLLVLESTAPSGDVSRPHHIASVVPNRYPRWFTLSHIESQQC
ELASTMLTAAKGDVRRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVS
LELGLQVMRMTLSTLNWRRREMVRWLVTCATEVGVYALDSIMQNWFTLFTPTEATSIVAT
TVMSNSTIVRLHLDCHQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQ
IVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWA
CALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDK
APLRQLLDATIGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDN
LKQIYKGKKKLMMLVRERFG
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggtcagctcccccccgccgccaagcgcctctgctgcagacccggctat
ggctcggggtgcaggccgggccagcgggcgggcggcgccggacccggcagcggggtgctc
tgcgccggaccctcctccgcagctgccgctgccgctctggggctgctgccgctcggcaag
acccagagccccgagtccctgctggacatcgcggctcgcaaggtggcggagaagtggccc
ttccagcgggtggaggaacggttcgagcggattccggagccggtgcagcgcaggatcgtc
tactggtccttcccccgcagcgagagggagatctgcatgtactcctccttcaacaccggc
gccgaggaccccaccgccgcccccgggggggccgccacggcgcccggcggggccgcggac
gccgccgctgccgccgacgagaaccgcctgcccttccgcaggggcatcgctctgctcgac
ggcggctgcgtcgataacgtcctgcaagtcggtttccacttgagtggcacagtgacagag
cctgcaatgcaatcggagccagaaactgtttgcaatgtagctatcagctttgatcgttgc
aagattacctcagtgacctgcagctgtggaaacaaggacatattttactgtgcccatgtt
gtggcactctctttataccggatccgcaagccagatcaggtcaaactgcatcttcccatt
tcagagacactctttcaaatgaacagagaccaactacaaaaatttgtacagtatttgatc
acagtgcaccacacagaagttttgccaactgctcaaaaattagcagatgaaattctttct
cagaattcagaaatcaatcaagtccatggtgctcctgacccaacagcaggtgctagcata
gatgacgaaaactgctggcatttggatgaggaacaggtccaagaacaggttaaaatcttc
ctctcccagggtggataccacggatcagggaagcagctcaatttgctctttgcaaaggtg
cgagagatgctaaagatgagagattcaaatggagctcgcatgttgacgttgataacagaa
cagttcatggctgaccctcgtctgttgctttggagacaacaaggaactacaatgactgac
aagtatagacagctctgggatgaactgggtgctctgtggatgtgtatagtcttaaatccc
cactgcaagttggagcagaaggccagttggctaaaacagctgaaaaaatggaacagtgtg
gatgtttgtccctgggaagatggaaaccatggaaacgagctgcccaatttaaccaatgct
ttgcctcagggtgcaaatgctaaccaagattcaccgaacaggccacatcggacggtgttc
actcgagccattgaggcgtgtgatctgcactggcaggacagccacttacagcacattatc
agcagtgacctgtacaccaactactgttaccatgacgacactgaaaactcactcttcgac
tctcatgggtggcccctctggcatgaacatgttcctacagcctgtgcgagggtggatgca
ttacgatctcatggatacccacgagaagcactgaggctagcaatagctattgttaatacc
ctaagaaggcagcagcagaaacagctggaaatgttccgggctcagaagaaagaacttctc
cacagaggagtaacctcaataacaaatcttgaaggttgggtgggacatcctttggacccc
attggcactctcttcagtagcctgatggaagcctgcagggtggatgatgagagcttccat
ggattctcagacttcatggagaacatggggcaatgcaaatctctggagtaccagcacctg
cctgcacacaagttcttagaagaaggggaatcttatttaacactggctgtggaagtagcg
ttgatagggctgggacagcaacgaataatgccagatggcttgtatgcacaagagaaggtt
tgtcgaaatgaggagcagctcatttctaagctacaggaaattgaattggatgatactctg
gtgaagatttttcgaaaacaagcagtcttcctattagaagctggaccatatagtggttta
ggtgaagtcatccatcgagagagcgttccaatgcacacatttgccaagtatctttttacc
tctctcctacctcatgatgctgaattggcatacaaaactgcactgagagccatgcggttg
ctagtattggaatctacggctccttcaggagacgtgtcccgcccgcaccacattgcatca
gttgttccaaaccggtatccccgctggttcactctaagtcacattgaatctcagcagtgt
gagctggcatcaaccatgctaacagcagccaaaggtgatgttcggaggctggaaacagtg
ttagaatccatccagaaaaatatccactcctcatcacacatcttcaaacttgcccaagat
gcatttaaaatagcaacacttatggacagcttgccagacatcactcttctgaaagtttct
ctggagctgggccttcaggtgatgcggatgacgctgtcaacactgaattggcgacggcgg
gaaatggtgaggtggctggtaacatgtgcaacagaagtaggcgtttatgcactggatagt
atcatgcaaaactggtttacacttttcactccaacagaagccactagtattgttgctaca
acagtgatgtccaacagcaccattgtccgtctgcatctggactgccatcagcaggagaag
ttggccggcagtgctaggacgcttgctctacagtgtgccatgaaggatcctcaaaactgt
gccctctctgcactgaccttatgtgaaaaggatcacatagcttttgagactgcttaccaa
atcgttctagatgctgctacaaccggcatgagctactcacagctttttactatagcacga
tacatggagcaccgtggttaccccatgcgggcctacaagctggccactttggccatgacg
catctcaacctgagttacaatcaggacacacaccctgccattaatgacgttctgtgggca
tgtgcgctcagccactcccttgggaaaaatgagctagcagctataatacctctggtggtc
aaaagtgtcaaatgtgcaacagtactgtcagacattttgcgtaggtgtactttgaccact
cctggcatggtgggacttcatggaaggaggaactctggtaagcttatgtcactggacaaa
gcccctttacggcaactcttggatgccacgatcggagcctacattaatacaactcattca
cgtctcactcacatcagcccacgacactatagtgagtttatagagttcctcagcaaggcc
cgagagaccttcttaatggctcatgatggtcacatccagtttacacagtttattgacaac
ctaaaacaaatctacaaaggcaaaaagaaactgatgatgctggttcgtgagcggtttggt
tga
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