Caloenas nicobarica (Nicobar pigeon): 136002299
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Entry
136002299 CDS
T11056
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
136002299 (TMC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
136002299 (TMC1)
03037 Cilium and associated proteins [BR:
cnic03037
]
136002299 (TMC1)
Transporters [BR:
cnic02000
]
Other transporters
Pores ion channels [TC:
1
]
136002299 (TMC1)
Cilium and associated proteins [BR:
cnic03037
]
Other cilia and associated proteins
Stereociliary proteins
136002299 (TMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
COX16
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
136002299
NCBI-ProteinID:
XP_065513282
LinkDB
All DBs
Position
Z:58838789..58898080
Genome browser
AA seq
954 aa
AA seq
DB search
MPQHEKPTTAERNDGSDVDNEEGSAAENEENIKGTDKVGKRATPRTRRGHARGRASRGGE
EDEDDEDGTRRAGYRRHRNRRGRGRAAGNEGSDSDVDPAKARKNQANQKSKEDGEEEEED
EKRGKSGKGKGEKKQDKKPDKKGKKEKANKKKKDKKKAGSGSDSDSEEELITEEELAKLK
EEVEEKKKLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMTKKW
MKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVP
EALMGKPYGSLPRKTVPRAEEASAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRM
PLSYFLVGVGTIGYSFIIVIRTMARNANEEGGGDDTSFNFSWKMFTSWDYLIGNPETADN
KFASITTSFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTLAGSGYLIFFVVRRSQKF
ALEGLENYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGN
LYTFIIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIQVDPADVPRGPCW
ETMVGQEFVRLTVSDTMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGN
VLGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFY
MAMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLEHDFPSWFGKVFGYA
SNPGLILPFILLMVLSIYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEQE
ENPFETEPPQPKQKGGKQDESTQNQDNKKGQNSSEGMKTGQPQEANSSQALQNPGPALNG
HYPLQSRGGNLPPPSIAVTRSPEPRGYGVPGYPPGNPRFAGAQPGMPKGPPNYR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaacatgaaaagccaaccaccgctgaaagaaatgatggcagtgatgttgacaat
gaagaaggcagtgcagctgagaatgaagaaaatatcaaaggaacagataaagtggggaag
agagcaacaccgagaaccagaaggggacatgctagagggagagccagccgtggtggtgag
gaggatgaggatgatgaagatggaacaaggagagctgggtatcgcaggcacagaaaccgt
agaggacggggaagagcagctggaaacgagggcagtgattctgatgtagaccctgcaaaa
gccaggaagaatcaagcaaatcagaaatccaaggaagatggtgaagaagaagaagaagat
gaaaaaaggggtaaaagtgggaaaggcaaaggtgagaagaaacaagacaaaaagccagat
aagaaaggaaaaaaagagaaggccaacaagaagaaaaaagacaaaaagaaagcaggatct
ggatctgattctgattctgaggaggagctgattacagaggaggaattggccaagctgaaa
gaagaggtagaagaaaaaaagaagctaattgccacgctacgaaacaagccatggaagatg
aaaaagaagttgtcggtcctgaaggaagcacagctttttgttgaaaagtttgaaggtgcc
cttggaaaaggaaaaggaaaaaagttctatgcatacaaagtgatgatgaccaagaaatgg
atgaaatttcaaagagattttgagaattttaagacagcctgcataccctgggaaatgaaa
attaaggagattgaaagtcactttggctcatcagtagcatcttatttcatattcttgcgc
tggatgtatggaataaacatgattctctttggactgacctttggacttgtaatggtgcct
gaggctctgatggggaagccatatggctctttacctagaaagactgtcccaagagctgaa
gaagcaagtgctatgaacttcgctactctctgggattttagtggctttgcacagtattcc
gtactcttttatggttattacaataaccagaggacaattggatggctcaagttcaggatg
cctctttcatatttccttgttggagttgggaccattggctacagcttcattattgtcatt
cgaacaatggcaaggaatgcaaatgaagagggtggtggggatgatactagttttaatttc
agctggaaaatgttcacaagctgggactacctgattggcaatcctgagacagcagataat
aagtttgcctccatcacaacaagctttaaggaagctattgtggaggagcaggagagcaga
aaagaggaaaatattcacttaactcgattcctgagggttcttgctaacttcttggccctg
tgcacacttgctgggagtggctacctcatcttttttgttgtcagaagatcccagaaattt
gccctggaaggtctggagaactacgggtggtgggaaagaaatgaagtgaacatggttatg
tcacttttaggaatgttctgtccaactttatttgatgtaatcagttctctggaaaactac
caccctcgaatagctctaagatggcagctgggacgaatctttgccctttttcttggcaat
ctctacactttcattatcgccctaatggatgaaatcaatctcaagttggaagaagaaaag
attgtcaagtataacatgacaatatgggaagccagtctgtacaatggtactatcccagaa
aattccactgctcctccaatacaggtagaccctgcagatgtccccagaggaccatgctgg
gaaacaatggtaggacaggaattcgtacggctgacggtctctgacacgatgacaacatac
atcacaattctaattggtgatttcttgagggctgtgtttgtaaggtttttcaattactgc
tggtgctgggatttggagtatggatttccatcatattctgagtttgatataagtggaaat
gtgctgggactgatctttaaccaaggcatgatctggatggggtctttttatgctccatgt
ctcccagcaatcaatgtgttccgcctccacacttccatgtacctgcagtgctgggcagtg
atgtgctgcaatgtcccccaagagagggtcttcaaggcttccagatccaataacttctac
atggccatgctgcttttcatcctctttctctccacactgcctgctgtgtataccattgtc
tccatcccaccatcttttgactgcggtcctttcagtgggaagactagaatgtttgaagtc
atatcagaaactctggagcatgacttcccttcctggttcgggaaggtatttggttatgcc
tctaaccctggactcatcctaccttttatattgctgatggtcctgagtatttattatctc
aacgctacatccaaatcttacaaggaagctaacttggaacttaaaaagaagctacaaagt
caagcagaagaaaataaaagaagaaataaacaaaaggcacaaaaatcaaatgaacaagag
gaaaatccatttgagacagaaccaccacaaccaaagcaaaagggaggcaaacaagatgaa
tccactcaaaaccaagacaacaagaaaggacagaatagcagtgaagggatgaagacaggc
cagccacaagaagccaactcctctcaggcactccagaatccaggccctgccctgaatggc
cactatcccttgcagagcagaggaggaaaccttcctcccccatccatagctgtgacgagg
tcaccagagcctagggggtatggagtgccaggctatccgcctggaaacccacgcttcgca
ggggctcagccaggaatgcccaagggccctcccaactacagataa
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