Caloenas nicobarica (Nicobar pigeon): 136002329
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Entry
136002329 CDS
T11056
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnic03032
]
136002329 (PIF1)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
136002329 (PIF1)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
136002329 (PIF1)
DNA replication proteins [BR:
cnic03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
136002329 (PIF1)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
136002329 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
Herpes_Helicase
AAA_16
Mg_chelatase
ABC_tran
AAA_7
PhoH
Motif
Other DBs
NCBI-GeneID:
136002329
NCBI-ProteinID:
XP_065513326
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All DBs
Position
Z:complement(97849565..97855985)
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AA seq
606 aa
AA seq
DB search
MEDAELRCTVAVEQPLPGGQGPRRRVMRGALVLLGRNELRQPVLRVVGGSGGAAAALSFA
LVGDAVRLFTRFAGDGRAAVRVGPGGAQVLLSDCPPNALRRFLRLLRLKVAAGPRAAPRE
PRLLDRPPPAFSAISPLQERDLLRAPGRLRGGEGQGERPAEVPRAERRPQARLSAEQEAV
LGAVRSGKSIFFTGCAGTGKSFLLKRIVGSLPPKSTYATASTGVAACHIGGTTLHAFAGI
GSGKAPLEQCIQLAERPGVRQHWLACQHLIIDEISMVDGKFFDRLEAVARAVRKQDEPFG
GIQLIICGDFLQLPPVCKANEETKFCFQAKSWRKCIHINMELTEVRRQTDKTFVSLLSAV
RLGRCTEEVTRLLMQTATNRSERDGILATRLCTHKDDVEITNERRLQQLSGKVHAFEALD
SDPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSRGLVNGARGVVVGFESEEKGLPKV
RFLCGVTQVIKMEKWVFKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFE
SGQAYVALSRARSLAGLRVLDFDPKVVRADPFVLQFYKQLRRHQLLTQDSLRTHSGDDEK
ENWKCS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcggagctgcgctgcacggtggccgtggagcagccgctgccgggcggacag
ggcccgcggcgccgcgtgatgcggggcgcgctggtgctgctgggccgcaacgagctgcgg
cagccggtgctgcgggtggtcggcggcagcggcggggcggcggcggcgctgagcttcgcg
ctggtcggtgacgccgtgcggctcttcacgcggttcgcgggagacgggcgggcggcggtg
cgagtggggccgggcggcgcccaggtcctgctctccgactgccctccgaacgcgctgcgc
cgctttctccgcctcctgcggctcaaggtcgccgccgggccgcgggccgccccccgcgaa
ccccgcctgctggaccgtccaccgccggctttctctgccatcagcccgctgcaggagcgc
gacctgctgcgcgcccccggccgcctccgcggcggcgaggggcagggggagcgcccggcc
gaggtgccccgcgcggagaggcggccccaggcgaggctttcggcggagcaggaggcggtg
ctgggcgccgtgcggagcgggaagagcatcttcttcaccggctgtgcagggaccgggaag
tcgttcctgctgaagaggatcgtgggctccctccctccaaagagcacctacgccacagcc
agcacgggagtggcagcttgccacatcggtggcaccactctccacgcttttgcagggatc
ggctctgggaaggcaccactggaacagtgtattcagctggcggagcggcctggggtgcgc
cagcactggctggcctgccagcacttaattatcgatgagatctccatggtggatggcaag
ttcttcgacaggctggaggcagtggcaagggcagtcagaaaacaagacgagccttttgga
ggaattcagctaatcatctgtggggacttcttgcaactacccccagtctgcaaggctaat
gaagaaaccaagttctgcttccaggcaaaaagctggaggaaatgcatccacataaacatg
gagctgaccgaagtgcggagacagactgacaagacttttgtctcgctcctcagtgcagtc
cgtttaggcaggtgcacagaggaggttaccagactgctgatgcagactgctactaacagg
tctgagcgcgatgggatcctggctacacggctctgcacccataaagatgatgtagaaata
actaacgagagacgcttgcagcagctctcaggaaaagtgcacgcttttgaggctttggac
agtgacccaatgctagtgaagttgattgatgctcagtgtcctgtgggtggtagagttgag
ctaaagcttggagctcaggtgatgctagctaagaatctggatgtatctcgagggctggtg
aacggggcacgaggagttgttgtaggatttgaaagtgaagagaaagggctgcctaaggtt
agatttctttgtggggtcacacaggtcatcaaaatggagaaatgggtcttcaaagggcca
tcaggagttcatctgagtcgtcaacagttgcctttaaaattggcatgggccatttccatt
cacaagagtcagggcatgtctttagattgtgtggaaatctccctgtctcgtgtcttcgaa
agtgggcaggcttatgtagccctttcccgagcccgtagccttgcaggtctccgtgttctg
gattttgacccaaaagtagtgagagctgatccttttgtgttgcagttctataaacaactg
agacgacatcaacttctaacccaggattccctacgcactcattcaggtgatgatgagaag
gagaactggaaatgcagttga
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