KEGG   Caloenas nicobarica (Nicobar pigeon): 136002498
Entry
136002498         CDS       T11056                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cnic03041]
    136002498 (SMU1)
Spliceosome [BR:cnic03041]
 Complex B
  Other components
   Complex B specific factors
    136002498 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_TEP1_C Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_IP5PC_F TFIIIC_delta DUF7165 KNTC1_N VPS8_N Beta-prop_NOL10_N PROPPIN LisH zf_topless
Other DBs
NCBI-GeneID: 136002498
NCBI-ProteinID: XP_065513666
LinkDB
Position
Z:68901886..68916834
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatcgagatcgagtcctccgacgtgatccggctgatcatgcagtacttgaaggag
aacagcctccaccgggccctcgccaccctgcaggaggaaaccaccgtgtccctcaacact
gtggacagtattgagagctttgtggctgacatcaacagtgggcactgggacacggtgctg
caagccatacagtcactgaagctgcccgacaagaccctgattgatctctacgagcaggtt
gtgctggagttgattgagctccgggaactgggggctgccaggtctctcctgagacaaaca
gatcccatgatcatgctgaaacaaactcagccagaacggtacatccaccttgaaaacctt
ctggccaggtcttactttgatccccgtgaggcatacccagatggaagcagcaaagagaag
cggagagctgctattgcacaagctttagctggagaagtcagcgtggtacctccatctcgt
cttatggccttgttggggcaggcactgaaatggcagcagcatcagggcctgcttcctcct
ggcatgacaattgacttgttcagaggcaaagcagctgtgaaagatgtagaagaagagaag
ttccctacacagctgagcagacatattaagtttgggcagaagtcacatgtggagtgtgct
cggttttcgccagatggacagtatctggttactggctctgtcgatggtttcattgaagtg
tggaacttcactactggaaagatcagaaaggatctgaagtaccaggcacaagataatttt
atgatgatggatgatgcagtgctgtgtatgtgcttcagtagagatacagaaatgctggca
actggagcacaagatggaaagatcaaggtgtggaaaatccagagcggtcagtgtctgaga
agatttgaacgagcacacagtaaaggtgttacatgcctcagtttctctaaagacagcagc
caaattctcagtgcttcttttgatcagacaatcaggattcatggtttaaaatctggaaaa
actttaaaggaattccgtggtcattcttccttcgtcaatgaagctacttttacccaggac
ggccactatattatcagtgcatcctctgatggcacagtgaaggtttggaacgtaaagacg
acagagtgctcaaacaccttcaaatctcttggcagcactgctgggactgacattactgtg
aacagtgtcattctgctgcctaaaaacccagagcacttcgttgtttgcaacagatccaat
acggttgtcatcatgaatatgcaaggacaaattgtaagaagtttcagctctggtaagaga
gaaggtggtgactttgtctgctgtgcgctttcaccacgtggcgaatggatctactgtgtt
ggtgaagattttgtgctctattgctttagcacagtgaccggcaagctggagcgaactctg
actgttcatgaaaaagatgtcattggcattgctcatcacccccaccagaacctgattgcc
acttacagtgaagatggcctgctcaagctctggaagccatag

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