Caloenas nicobarica (Nicobar pigeon): 136002551
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Entry
136002551 CDS
T11056
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
136002551 (DENND4C)
Membrane trafficking [BR:
cnic04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
136002551 (DENND4C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
136002551
NCBI-ProteinID:
XP_065513758
LinkDB
All DBs
Position
Z:66871011..66946751
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AA seq
1952 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLLDQEISRHETKSTGPKAPITDIAVIIKSAGETVP
EGYTCVEATPTALQANLNYGSLKSPELFLCYRRGRDKPPLTDIGVLYEGKERIISGCEVI
QATPYGRCANVNNSSASSQRIFITYRRAPPIRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPPTNSLAYKAGLIFRYPQENYESFPLSESVPLFCLPMGA
TIECWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQLKLGLLTAVE
RKVVTSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLFFVLLEGKI
LLHSLRPAVLTGVAEAVAAMIFPFQWQCPYIPLCPLSLATVLSAPLPFIVGVDSRYFDLY
DPPQDIVCIDLDTNMVYISDDKKSTNWKQFPKKPCKSLLSTLKKLHPQLAAVHRKTQEGS
AVEMTPIEADFSWQKKMTELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYTKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGT
EKGEKVDVDSVEDARLIELDESQKSEHTVFIMPPEPPSDDGQERVPKYSYKNFPRLDFKL
FDRPQELKLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKYYVSPPQWAKCLYSHS
YSLWFICLPAYIRVAHPKVKALQQAYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESAWPSSNRSGIFLWTKVRNVVRGAAQFRLCL
KKSTESPQVPVKSALRSTTGGSDGDMVSHGSVDSSNDANSGEHTLFVSDLVRLDSIDNHS
STGGQSDQGYGSKDELLRGDGDSLHSTETQVEKDTTSKAEDLIGEDCTAKPDEKQQLNIE
THSPTDPPVWGNSIVKVPSGIFDSSGRKSGETGSSPLFVTQDSAEDVVFGDVSPKKTSEK
GQKRQKMFSERSCSFSSESRAGMLLKKGSLDLHSKEIAIMMGADAKILTAALSGARTSPC
HMNKSNSSESIVDQQVSGISGTWSCVTESDWELEHKSSPVLEEPGEGQEHLENGRDENMN
TMEDMNLEQSAESKNQKPESKHETTKRNSFYGVVKPIEREDVEVGLDPLSLLATDSMQPR
HPELEEKLVSPVAARNLADEIESYMNLKSPLGSKFPSMELHKPDREVEASGTLGHSQERR
SSLPLDPVLPSPESYENRRSPSVSRSKTFTGRPKQQTHPRVQKERSSSLTGLGRSSPHGS
LGSVVTTLSNLKLDNILSGPKMDVLKSGMKQAANVASKMWGVVTSAYNYSDEEEEHNRPD
FNFPTGFEDSILGDNLSLRAGVPGLITNELAQSTTSLGSSSSSGDAGRQHYSAGEISFPR
SMKVLDSEKSEHSSSYNTSLSSIFQNYAMEVLMSSCSECRACGALVYDEEIMAGWTADDS
NLNTTCPFCKSTFLPLLNIEFKDLRGSASFFLKQSTSGDSLQSGTLPLTTDPLEHKLLSS
PAVADLISFSDHPQSSHTIAEETSSAAEQSDVAEEQSKDPRTMKTSVNNPLKRGVSLTRS
HSVGGPLQNIDLSQRPSHGISTVSLPNSLQEVVDPLIKRPNPLPVSVPYLSPLVLRKELE
SLLENEGEQVIHTSKFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNDGVQLPLTS
LAQDSKLVYIHLLWDNINLHQEPGEPLYISWRNLNSTEKRASTVPEDQQATNTLLENIKL
SIQHNNVEKPINLLLHKVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLAHER
LPKDVLEKMEKIDAPPSSRVECCRKCFGAPLI
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccacgagtggctgactattttgtggtggcagggctcactgat
acagataccgcaaccctcttggaccaagaaataagccgacacgaaacaaagtcaactggt
ccaaaggctccaattactgacattgctgtgataattaaatcagctggtgaaactgtcccg
gaggggtacacctgtgttgaagccacccctacagctcttcaagccaacttgaactatgga
agtctaaagagtcctgaactttttctttgctacaggagaggccgggacaaaccacctctt
actgacattggagttctatatgaaggaaaggagcgcatcatttcaggctgtgaggtgatt
caagctactccttatggtcgttgtgctaatgttaacaacagctcagcttcttctcaacgg
atctttatcacgtatcgaagggctcctccaatacgacctcaaaattcattggcggtgaca
gatatctgtgttattgttaccagcaaaggagaaacccctcctcatacattctgcaaagtt
gataagaatttaaattgtggcatgtggggttccagtgtatacctttgttacaagaagtct
gtgccacctacgaactctttagcatataaagctggcttaattttcaggtatcctcaagag
aactatgagtcattcccactgtcagaatctgtacctctcttctgccttcctatgggagct
actattgagtgctgggatcctcaaaccaaatatccactaccagttttctcaacttttgta
ctgacctgctcttctgcagaaaaggtttatggtgctgctattcagttttatgagccttat
ccccgggagctgctaacagaaaaacaacaattgaagctgggtctcctgacagctgtggag
aggaaagtggttacttccaagtccatcaattccaacaaatgcatctgccttctctcacac
tggcctttctttgaagcatttagaaaatttcttatgttcatctacaaactttctgtctct
ggacctcatcctcttcccattgaaaagcatatatcccattttatgcacaatatacctttt
ccttcaccacaaaggccaagaattcttgtgcagctttctgcccacgatgcgttaatattg
tctcagccagtttctacaccattgccattaagtggagcaaactttagcactctgctcatg
aatcttggaccggaaaactgtgccactctattattctttgtattactagaaggcaagatc
ctcctccattctcttagaccagctgtgttgacaggagttgctgaagctgtagcagctatg
atatttccatttcagtggcagtgtccatatatccccctatgtcctttgtctctggccacc
gtactcagtgcacctcttccatttattgttggagttgattcacgatactttgatctgtac
gatccaccacaggatattgtgtgcattgacttagacacaaacatggtgtacatatcagat
gataagaagagcaccaactggaagcagtttcctaagaagccgtgtaaaagtctgcttagc
accttaaagaaactgcaccctcagctggcagcagttcacaggaagactcaagaaggctct
gcagtggagatgactcctattgaggcagacttctcatggcagaagaagatgacagaactc
gagatggagatccaggaagcttttctccgtttcatggcgtctattttaaagggttacaga
acattcctcaagccaatcacacaggcaccttcaaataaagcaactgctgctgattccttg
tttgatcatcaaggatttttaaaaagcagagaccgtgcctataccaagttctacacacat
ctcactaaaacacagatattcagccgctttattgaagagtgcagttttgtgagtgacaag
gatactggcttggcattttttgatgactgcatagaaaagctctttccagataaaggaaca
gaaaaaggagagaaggttgatgtagattccgtcgaagatgcacggttgattgagcttgat
gagtcacaaaaaagtgaacacacagtgttcataatgccaccagaaccacccagtgatgac
ggacaggagcgagtgccaaaatacagctataaaaacttcccacgactagatttcaagctc
tttgacaggccacaggagctcaagctctccttcagcagacacccagctggaagcagcatt
tcaaatagtccagcactcatggcaaagaggacaaaacaggagataaaaacagcccataaa
ttagccaagaagtattatgtaagccccccacagtgggctaagtgtctctacagtcatagt
tacagcctatggtttatttgtctgccagcctacatcagagttgcacatcccaaggtcaaa
gcactgcagcaggcatacgatgttctaattaaaatgagaaaaactgatgtggaaccacta
gatgaggtctgctacagagttgtaatgcagctctgtggactgtggggtcagcctgttcag
gctgtgagagtcctctttgaaatgaaaaatgctggaatacagccaaatgcaatcacctat
ggttattacaataaggcagttttagagtctgcttggcctagcagtaaccgcagtggcata
ttcctgtggacaaaggtacgaaatgtagttcgtggtgcggcacaatttaggctgtgctta
aagaagtcaacggagagcccacaagtacctgtgaaatcagctctgcggagtaccacgggt
ggaagtgatggggacatggtgagccatggtagcgtggatagttctaacgatgctaacagt
ggggagcacactctcttcgtcagtgacttagtcaggcttgattccattgataatcactct
agcacaggtggtcagtcagaccagggctatggatccaaggatgaacttttaagaggtgat
ggggatagtcttcattcaactgaaacacaagtagagaaagatactacttctaaagctgaa
gacctaataggagaggattgtactgcaaaacctgatgaaaagcaacagctgaatatagaa
actcatagtccaacagacccgcctgtttggggtaacagtattgtgaaagttccatctggc
atttttgatagcagtggaaggaaaagtggtgaaactggttctagcccactgtttgtaact
caggattcagctgaagatgtagtcttcggtgatgtttctcctaagaaaacaagtgaaaaa
ggacagaagaggcagaaaatgttttcagagagaagctgcagtttcagcagtgaaagcaga
gcaggaatgctgctgaaaaaaggcagcttggacttgcattctaaagaaatagcaataatg
atgggagcagatgccaagatcctaacagcagctttatctggggccagaacctcaccctgt
catatgaataaatccaacagctctgaaagtatcgttgaccagcaggtttctggcataagt
ggcacttggagttgtgtgactgagagtgattgggaattggagcataagtcttcaccagtg
ctagaagaacctggggaaggacaggagcatcttgagaatgggagagatgaaaacatgaac
acaatggaagacatgaaccttgaacagtcagctgagtccaaaaaccagaaaccagaatcc
aaacatgaaactactaaaaggaatagcttttatggagtggttaagcctattgaaagggaa
gatgttgaagtaggcttggaccctttatctttgctggctactgacagcatgcaaccaagg
catccagaacttgaggaaaagttggtgtcaccagttgcagcacgtaatttggcagatgaa
atagagagctatatgaatctgaagagcccattgggtagtaagtttcccagcatggaactg
cacaagccagacagggaggtggaagcctctggtacacttggtcactcccaagaaaggagg
tcaagcctgcctttggatcctgtcttgccatctcctgagtcttatgaaaatcggagaagt
ccttctgtgtccagatccaaaacattcactggacgaccaaagcagcaaactcatccgcga
gttcaaaaggagcggtcttcatctttgacaggactaggtcgttcttctccacatggctcg
ttaggatctgtcgtaacaactttatccaatctgaagttagacaatatactgtctggacca
aaaatggatgttctgaaatcaggcatgaaacaggctgccaatgtggccagtaagatgtgg
ggagttgtaacttcagcctataattactcggatgaagaggaagaacacaatcgaccagac
tttaacttccctactggttttgaagatagtattttaggagataatctgtcactgagagct
ggagtcccagggctaattacaaatgagcttgcacaaagtactactagtcttggcagtagc
agtagcagtggagatgcaggaagacagcattacagtgcaggtgaaatttcattcccaaga
agtatgaaagttctggattctgagaagtcagagcacagctcttcatataatactagttta
tccagcattttccagaactatgcaatggaggtattgatgtcaagctgctctgaatgtaga
gcttgtggtgctttggtttatgatgaagaaattatggctgggtggacagcagatgattca
aacttgaacactacttgtcctttctgtaaaagtaccttcttacctttacttaatattgaa
tttaaagacctacgtggttctgcaagctttttcctgaagcaaagtacctccggagatagt
ttacagagtggtacccttccattaaccacggatcccttggagcacaaactgttgtccagt
ccagctgttgctgacttgatcagtttttcagatcacccacaatccagccataccatagcc
gaagaaacgagctctgcagctgagcagagtgatgtggcagaagaacaaagtaaagatcct
agaaccatgaagacatctgtcaataatccactaaaaagaggagtgtctttgactcggagc
cacagtgttggaggtccactgcaaaacattgatctttcccagagaccgtctcatggcatt
tcaacagttagtcttccaaatagtttgcaagaagttgtggatcctttaataaaaagacct
aaccctctacctgtatctgtaccctacttgagccctttggtactgcgtaaggagcttgaa
tcactgttggaaaatgaaggagagcaagtaattcatacatccaaattcatcaatcaacac
cccataattttctggaacctagtttggtatttccgacggttggatctccccagcaactta
cctggactcattctaacatctgaacattgtaatgatggagtccagcttcctttgacatca
cttgctcaagatagcaagctagtatacatccatcttctgtgggacaatatcaacctccac
caagagccaggggagcctctgtatatatcttggagaaatctcaattctactgagaagaga
gcttccactgtgccagaagatcagcaggcaacaaacactttgttggagaacatcaaactg
agtattcaacacaataatgttgagaaaccaatcaacctccttctacacaaagttaagcca
gatgtgaaacggcagaggagtttttacagagaaattcttttcctgtcgctggtgtctctt
ggaagagagaacattgatattgaggtctttgatagcgaatacagacttgcacatgaaagg
ctaccaaaggacgttcttgaaaagatggagaaaatagatgctccaccaagcagcagggtt
gagtgttgtaggaagtgctttggagcacctttaatataa
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