Caloenas nicobarica (Nicobar pigeon): 136002602
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Entry
136002602 CDS
T11056
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136002602 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
136002602 (ABCA4)
Transporters [BR:
cnic02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
136002602 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
136002602
NCBI-ProteinID:
XP_065513890
LinkDB
All DBs
Position
Z:91526886..91598640
Genome browser
AA seq
2333 aa
AA seq
DB search
MSFFRQVRLLLWKNWVLRKRQKLRFLVELVWPLTLFLALVWLRKANPLYRQHECHFPNKA
MPSAGILPWLHGIFCNMNNPCFRSPTPGEGPGVVSNYNNSILARVYKDAQELLLEAPEIQ
DLGRIWEELIIMSQFMETLRTNPERIAGRGIRILDILKDGETLTSFLLEDAGLPDTVVFQ
LINAQVRPEQFAYGVPSLTLKDIACSQMLLDRFIIFSSRRGLPSVHKAMCALSQESLQRV
EDALYANVDFFKLFQLLPTVLDRNSPGADLKIWGRVLSNVSQVMQKLARKPSVQNLLMVL
QPFVQHGRPESLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSSY
IYDNTTTPFCNALIQNLESNPLTKIAWSAVKPLLMGKILFAPDSPSVRQILKNANSTFEE
LERLRLLTKAWEEIGPQLWYFFQNSLQMNMIRDSLKHPTVRNFLNSQLGAEGLTAEHIIN
FLHNGSPGSREKGMADFDWRNIFRTADQALRLLSQYLECLTLDKFEGYINETQLTHQALH
LLQENKFWAGVVFPDIEPTRSTLPPHVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTNTEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVIWCTWFLDSFGMMAVSTFLLTVLIM
CGQVLHYSNPLLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIVCF
AWQDRITINLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
KMMLFDAFLYGILSWYLDNVFPGDYGLPQPWYFPVQESYWLGSRNPKAEKTASADEKTPE
SEGCVDQKALEGEKNGSRTKKSEEPEKPEEKTDNQGEKDGKNKQCKHKREKEHGKQGKPQ
TDVQDKDEININTFFEPEPTGLIPGVCIQNLVKIFANRPKPAVDGMNITFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLIDGLDIQTHMDSIRHRIGMCPQYNILFNHLTVAEH
ILFYSQLKGRSRDEAEQELEKMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEADILGDRVAIISQGKLFCSGS
PVFLKNCFGSGFYLTLVRKMKTTRTGRATSLCSCGSQCSCSCSSCTRRTKEGAPEQELDG
DLNELAEVIHHHIPEAKLIESIGQELIYLLPNKHFKQRSYASLFRELEETLDDLGLSSFG
VSDTPLEEVFLKVTAEADPGMQKAGDTQENSSTLGKISTENKPAEQTPLKTSDTSRMPVG
IAGDENEGKGSRQYKGFQLVHQQIKALLIKRFHHASRSHKDFLAQIILPASFVLLSLILT
VIIPPFGQYPALTLHPWIYGQQFTFFSNERPGSEQMASITDAFLNKPGFGNRCMKNQPLP
NYPCNNMPTAWDTPAVQPNLSSLLLSQKWNPENPSPSCKCSTHKKLIMLPECPAGAGGLP
PPQRVQHSTEILQDLTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGRLPVLH
VSGNQVVNFLSDLGRMMNVTGGQSSLAAAKEMSNFLKYMETEDNIKVWFNNKGWHAMVSF
LNVANTAILRANLRTGQAPEEYGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQERVTKAKHLQFVSGVSPAIYWLTNFMWDIVNYTLSAGMVVVIFTGFN
KKAYTSPTNLPALVALLLLYGWAVIPMMYPAASFFNVPSTAYVALSCINLFVGINSSAIT
FILELFENNPSLLKFNKTLKNVLIVFPHFCLGRGLIDLAMNQAVTEVFARFGEEHVSNPF
QWDFVGKNLVAMAVQGVAFFILNLLMQHRLFSTRWFAETAMSPIMDEDEDVAEERKRIMN
GGNKTDILEIQELTKIYAGRHKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTD
VTSGDAVVAGSSILTHISNVHQNMGYCPQFDAIDDLLTGREHLHLYARLRGVPAEEIKRV
AEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRRLLW
DCIVSVLRDRRAVILTSHSMEECEALCTRLAIMVKGTFKCLGTIQQLKYKFGDGYIVTLK
IKAPKSGMPPDPTPAEQFIRMNFPGSLQREKHYNMLQYQICASSLAKIFRLIISNKENLH
IEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREGKVSPALQQQAVA
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctttaggcaagtcagacttctactctggaagaactgggtcctccggaaaaga
caaaagcttcgttttcttgtggagcttgtatggcctctgacattatttcttgcccttgtc
tggctgaggaaagctaatccattgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatctgcaggaatactgccatggttacatggcatcttctgtaacatgaacaatcca
tgtttccgcagcccaacccctggagagggtccaggtgttgtgtccaactacaacaattca
atccttgcaagggtatataaagatgctcaggagctcttactggaagctcctgaaatccaa
gaccttggcagaatttgggaagaactgatcattatgagtcagtttatggaaacattgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaagatggg
gagaccctcacttccttcttgttggaagacgctggcctcccagatactgttgttttccag
cttatcaatgctcaagtgcgccctgaacagtttgcctacggtgtccctagcttgactctg
aaggacatcgcttgcagtcagatgctcctggaccgctttattatcttcagcagccgaaga
ggtctcccttctgtgcacaaggccatgtgtgccttgtcccaggaaagcctgcagagagta
gaagatgccttgtatgcaaatgttgatttttttaagctatttcagctgcttcccactgtg
ttggacagaaactcaccaggcgctgacctgaagatctgggggagggtgctgtctaatgtc
tctcaagtgatgcaaaagctagccaggaagccaagcgttcagaaccttttgatggtgctg
caaccctttgtacaacacggaaggccggaatccttaggccacttggtgagctcactgtct
gatcttttctgtggctacccagaaggaggtggatccagagtactttccttcaactggtat
gaagataacaactacaaagctttcctggggattgactcaacaaggaagaaatccagttat
atttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaattctcttt
gctcctgattcaccttctgtacggcaaatactaaaaaatgcaaactctacgtttgaggaa
cttgaacgcctcagactgttgacaaaagcttgggaagaaataggacctcagctgtggtac
ttctttcaaaacagcctacaaatgaatatgatccgtgactctctgaagcaccctacagtg
aggaacttcttgaacagccaactgggtgctgaaggcttaactgctgaacatataatcaac
tttctccacaatgggtcgccagggagccgggagaagggaatggcagactttgactggagg
aacatcttccgtactgcagatcaagctctgcgtttgctcagccagtatctggagtgcttg
accctggataaatttgaaggttatattaatgaaactcaactcactcatcaagcccttcat
ctgctgcaggaaaacaaattctgggcaggtgtagtttttccagacatagagcctacaaga
agcactcttccaccacatgtgaaatacaagatccggatggacatagatgccgtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgtggatgac
ttacgttatatctggggaggctttgcatatctccaagatatgattgagcatgggattata
aagacccagaccaacactgaagtgccattaggaatttatctgcagcaaatgccatatcca
tgttttgtggatgatgttttcatgatcaccttaaaccgcgcctttcctatcttcatggtg
ctagcttggatatattcagtttccatgactgtgaagagtatagtgctggagaaggaaatg
cgcctgaaagaggctatgaagaacaggggtataactaatggggtgatttggtgcacttgg
ttcctagacagctttggcatgatggctgtgagcacattcctcctcacagtgctgattatg
tgtggacaagtactacattatagcaatccactcctcttctttctgttcctcctgacgttc
accacagccacaataatgcagtgtttcttgttcagcaccttcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctcccccacattgtctgcttt
gcctggcaagaccgcataactattaatctgaagatcctagcaagtttgctttctcaagta
gcttttggcttcggtacagaatacttgtcacggtatgaagaacaaggtctcggcctacag
tggggtaacatcagaaccagtcctttggaaggagatgaatatagttttcttttttccatt
aaaatgatgctttttgatgcttttctctatggaatactttcttggtatcttgataatgtt
tttccaggggactatggtctaccacagccttggtatttccctgtgcaggaatcttactgg
cttggctctagaaacccaaaagctgagaaaacagcaagtgctgatgaaaaaactccagag
tcagaaggctgtgtggatcagaaggccctggaaggggaaaaaaatggaagcagaacaaag
aaatctgaagagcctgaaaagccagaagaaaagactgacaaccagggggagaaggatggt
aaaaacaaacaatgtaaacacaaacgagaaaaagaacacggcaagcaggggaaacctcag
acagatgtccaggacaaagatgaaattaatataaataccttctttgagcctgagccaaca
ggattgattccaggagtatgcattcagaacctggtgaaaatttttgccaacaggcccaag
ccagcagtagatgggatgaatattactttttatgagggccagatcacagccttccttggt
cacaatggagcaggaaagacaactactatgtcgatactgacaggccttttcccacccacc
tctggaactgtgctgattgatggcctggatattcagactcacatggactccattcggcac
agaataggcatgtgcccacagtacaacatcttattcaaccaccttactgtagcagagcac
atcttattttattctcaactgaaagggagatccagggatgaagctgagcaagagttggaa
aaaatgctagaagacatgggcctcacccataaaaggaatgaagaggctcagaatttgtca
ggtggaatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaagttgta
gtcttggatgagcccacttctggagttgatccatattccaggcgatctatctgggatctt
ctgctgaagtatcgctcaggcagaaccatcatcctctcaacacatcacatggatgaggca
gacatccttggagacagagtagccatcatatcccaagggaaactcttctgctcaggctct
cctgtattcctaaagaactgctttgggtctggcttctatctcactcttgttcgcaaaatg
aaaactaccagaactggaagggctacatcactttgtagctgtggatctcagtgctcctgc
tcctgctccagctgtacacgcaggaccaaagaaggagctccagagcaggaactggatgga
gatctaaatgagctagcagaagtaattcatcatcatatcccagaagcaaaattaattgaa
agcattggtcaggaactcatttaccttttgcccaataaacactttaaacagcgatcttat
gccagtctcttcagagaactggaggaaacattggatgacctgggactcagcagtttcgga
gtttcagacacgccacttgaagaggttttcctaaaggtcacagcagaagctgaccctgga
atgcaaaaagcaggagacactcaagaaaatagttctactcttggcaaaatttctactgag
aacaaaccagctgaacaaaccccactgaaaactagtgacacttctcgaatgccagtaggc
atagcaggagatgaaaatgaaggcaaagggtcccgacagtataaaggttttcagcttgta
catcagcagatcaaagcactgcttatcaaacggttccaccatgcctcccgcagccacaag
gacttcctagcccagattattctccctgctagttttgtgttgctatctttaatacttaca
gtcattattcctccatttggacaatatcctgccttaaccttacacccttggatctatgga
caacagtttactttcttcagcaatgagcgtcccggcagcgagcagatggcctccatcact
gatgctttcttgaataaaccaggatttggaaatcgctgcatgaagaatcagcctcttccg
aactacccgtgcaataatatgccaactgcctgggacacccctgctgttcagcctaaccta
agcagcctcctgctgagccaaaagtggaaccctgagaatccttcaccttcctgcaagtgc
agtactcacaagaaactcattatgctgccagaatgccctgcaggcgcgggaggcctcccg
ccaccacagagagtgcagcacagcacagaaattcttcaagatctgacccacagaaatatt
tcagattttctggtgaaaacgtatcccactttgataaaagggagcttgaagagcaaatat
tgggtcaatgagcaaagatacggaggaatttctataggaggaaggcttccggtccttcat
gtttctggaaatcaagttgtcaattttttaagtgatcttggccgaatgatgaatgtgaca
ggagggcaaagttcactggctgctgctaaagaaatgtctaatttcctcaaatacatggaa
actgaagataatattaaggtgtggtttaacaataaaggctggcatgctatggttagtttc
cttaatgtagccaatactgcaatccttagagctaacctgcggactggccaagcccctgag
gaatacggaatcactgctatcaaccaccctctgaacctcactaaggagcaactctctgaa
gtcactgtgcttacgacttccgtggatgcagttgttgccatctgtgtgatttttgccatg
tcctttataccagctagttttgttttatacctgattcaagaacgtgtaacaaaagccaag
catctacagtttgtcagtggtgtgagccctgcgatctactggctaactaacttcatgtgg
gacatagtgaattatacactgagtgctggaatggttgtggttatattcactggattcaac
aagaaagcctacacttctccaactaatctccctgcgcttgttgccttgctgcttctgtat
ggatgggcagtaattcccatgatgtaccctgctgcttctttcttcaatgtccctagcact
gcttatgttgcattatcttgtattaatctctttgtggggatcaacagcagcgccattact
ttcatcctggagctatttgaaaataacccgtctttgctgaagtttaataaaacattgaaa
aatgtgttgattgtcttcccacatttttgcctgggccgtggactcattgacttggccatg
aaccaagctgtgactgaagtatttgccaggtttggtgaggagcatgtttccaaccctttt
cagtgggactttgttggaaagaacctggttgccatggctgttcaaggggttgcattcttc
attctgaatctccttatgcagcaccgtttgttctctacaagatggtttgctgagactgcc
atgtcacctattatggatgaagatgaggacgttgcagaagaaagaaaaagaattatgaat
ggagggaacaaaacagatatcttagaaatacaagaactgaccaagatttatgcaggtagg
cacaaacctgcagtggacagactctgtgttggcatccgtcccggagagtgctttggtctt
ttgggagtgaatggtgctggcaaaacaacaacattcaaaatgctgactggagatactgat
gtgacatctggagatgctgtagtggctggtagtagtatattgacccacatttctaatgta
catcaaaacatgggatactgccctcagtttgatgccatcgatgacctgctcacaggacga
gaacacctccacctatatgcgcgcctgcggggggttccagcagaggagatcaagagggtt
gctgaatggggcatccagaagctgggacttcctatgtatgcagaccacctggctggtacc
tacagtggtggcaacaaacgcaagctctccactgccattgcactgataggctgcccacca
cttgtcttgctagatgaaccgactactggaatggaccctcagtcccggcgcctcctgtgg
gactgtattgtcagtgtgctcagagataggcgagctgtgattctaacctcacacagcatg
gaagaatgtgaagccctctgtacccgtttagccatcatggtaaaaggtaccttcaaatgc
ctgggcacaattcagcagctaaaatacaagtttggagatggctacattgtcaccctgaaa
atcaaagctccaaagtctggaatgcctccagatcctactcctgccgagcaattcatacgc
atgaacttcccagggagtttacagagagaaaaacactacaacatgctgcagtatcagatt
tgcgcctcctctctggctaagatttttcgattaataatctccaataaggaaaacttgcat
attgaagagtattctgtgtctcaaacaactttagatcaggtttttgtgaattttgctaaa
cagcagatggaggatgaggaaattcctttgcatccccgtgcagctggagccagccgagaa
ggaaaggtgtcccctgctttgcaacagcaggcagttgcgtag
DBGET
integrated database retrieval system
