Caloenas nicobarica (Nicobar pigeon): 136002633
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Entry
136002633 CDS
T11056
Symbol
PCDH8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
136002633 (PCDH8)
Cell adhesion molecules [BR:
cnic04515
]
Cadherins
Protocadherins
136002633 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
136002633
NCBI-ProteinID:
XP_065513991
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All DBs
Position
1:181856362..181859980
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AA seq
998 aa
AA seq
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MSPLRLLAVACLLALSHCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEGGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPRAQMTLEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPAFAQGSVT
VELPEDAPPGSLLLDLDAADPDEGPNGEVVYAFGSQVPPEARRLFRLDPRSGRLTLEAAV
DYERTRTYELDVRAQDRGASPRTATCTVIVRLTDVNDNAPRISISALRGAASAAGVAYVS
EAAASESFVALVSASDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTLVKVRMVDQNDNPPVIIHPVLTNGTVEIGVSSKTSRDSLVAQIKARDADDG
ANAELTFAFLEEPQQDLFTINPSTGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQELAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNRR
KKGNEIKNNTSLKDQIDISHLEKGRQEEGSQRGNVFEVRTFPSKTSFTSPDPSPAAEEIS
TAESGMDSTCLYEGQKKLRGPNGEQGIAAAPSYSKEPAPPVAIWKGHSFNTISGREAEKF
SGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRA
NPHPPPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITL
LSPPRPARLPDLQEIGVPLYPAPSTRYLGPQTETAEKV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctgcggctgctggccgtcgcctgcctgctggccctgtcccactgcaagacg
gtgaggtaccgcaccgacgaggagggcgcgccgggcacggtgatcggtaccttggccgac
gagatgccggtgaaggcgccgggggagatgagcttccgcctgatgcggcagttcagcaac
agctcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaaggggggctg
gaccgggagcggctgtgcgggcaagccccccagtgcgtcctggccttcgacgtggtgagc
tgctggcgggagcgctaccgcctggtgcacgtggagctcgaggtgcgtgacatcaatgac
aacgcgccccgcttcccccgtgcccagatgacgctggaggtgtcagagagcgctgcacct
ggcactcgcctcccgctggaggtggctgtagatgaggatgtgggctccaactccatccag
agcttccaggtctccctcaacagccactttggtgtggaggcacagacacgggcagatgga
gcacgctgtgctgacctggtgctgctccaggagctggaccgtgagcggcagccctcctac
acgctggagctggtggccaaggatggaggcagcccagcacgctcgggcacagccaccgtg
cacgtccgtgtcctcgacgccaacgacaacagccctgcctttgcccagggctcagtcaca
gtggaactgcccgaggacgcgccacctggctccctgctgctcgacctggatgccgctgac
cctgacgagggccccaatggcgaggtggtctatgccttcggcagccaggtgccccccgag
gcacggcggctcttccgccttgacccacgctcaggccgcctcacgctggaggccgccgtg
gactatgagcgcacccgcacctatgagctggatgtgcgtgcccaggaccgcggcgccagc
ccccgcaccgccacctgcaccgtcatcgtgcgcctcactgatgtcaatgacaatgcgccg
cgcatcagcatcagtgccctccgtggtgccgccagcgcggctggcgtggcctacgtcagc
gaggcagcggccagcgagagcttcgtggcccttgtcagcgcctcagaccgtgactcaggt
gccaacgggcaggtgcgctgcagcctccgaggccacgaccacttcgccctgcaacgtgcc
tacgaggacagctacatgatcgtcaccacagctgcactggaccgcgaacgcatccctgag
tacaacctcactgtggtggctgaggacctgggctcaccacccttcaagaccgtccgccag
tacacggtgcgggtgagcgatgagaatgacaacgcgccactctttgccaagcctctctac
gaggtggccgtgccagagaacaaccctccgggtgcctacatcaccactgtggtggcccgt
gaccccgatcttggccacaatggtaaggtcacctaccggctcctggagacacaggtcatg
ggggcccccatctccacctacgtctcagtggaccctgccaccggggccatctatgctctc
aggacgttcaactatgagatcctcaagcagttggatctgaggatccaggccactgatggt
gggtctccgcagctctccagcagcacccttgtcaaagtgaggatggtggaccagaatgac
aaccctcctgtcatcatccacccagtgctcaccaatgggacggtggaaattggtgtgtcc
agcaagacctcccgtgactctctggtggcccagatcaaagctcgagacgcagatgatggg
gccaatgccgagcttacctttgccttcctggaagagccccagcaggaccttttcaccatc
aacccaagtactggggacattgtgctgaggggtgacctctctgaagagttaggacagctg
ttcaaggtcatccttaccgtgacagacaatggcagacccccactggccacaaccgccaca
gtaaacttcctggtgaccgccactgctccttccagtatccaggagctagccaagcccagc
tcctgggaaggaaaggctttgcagtgggacatccctctgatcgtgatcatcgtcctggca
ggcagctgcaccctcctcctggtggccataatcaccatcgccaccacctgcaacaggcgc
aagaaagggaacgagatcaaaaacaacacttccttgaaggaccagatagacatctcccac
ctggagaagggccggcaagaggagggcagccagcggggcaatgtgtttgaggtacgaacc
tttcccagcaaaacctctttcaccagccccgacccttctccagctgctgaagagatttcc
actgctgagagcggcatggacagcacttgcctctacgagggtcagaagaaactgagagga
ccaaatggggagcagggtattgctgctgctccgagctacagcaaggagcctgctcccccc
gtggccatttggaaggggcactcgttcaacaccatctctggccgagaggcagagaaattc
agtggcaaagacagcggcaaaggcgacagcgattttaatgacagcgactcagatatcagc
ggagatgctctgaagaaagatctcatcacgcacatgcagaacggtctgtgggcatgcaca
gccgagtgcaagatcctgggacactcggaccgctgctggagcccctcctgcggccgagcc
aaccctcacccccctccccatccttcggcacccctctccaccttctgcaagagcacatcc
ttgcccagggatccccttcgcagggacaacttttatcaagcccagctgcccaaaacagtg
gggcttcagagcgtctacgagaaagtgctgcacagggactttgaccggacgatcacgctc
ctctccccgccgcgccccgcacggctccctgaccttcaggagatcggggtgcccctctac
ccagccccctcaactagatacctgggcccccagactgagacggctgagaaggtgtag
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