Caloenas nicobarica (Nicobar pigeon): 136002824
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Entry
136002824 CDS
T11056
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
136002824 (RNF40)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136002824 (RNF40)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
136002824 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
CC_Bre1
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
136002824
NCBI-ProteinID:
XP_065514134
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MSGAGGKRGAGDGGSGPPEKKPAREEQPPTTLIEPLRLGGISSTEEMDLKVLQFKNKKLS
ERLEQRQAVEDELRERIEKLEKRQATDDATLLLVNRFWGQLDQEVQSLLRNTEGGEGPAG
PPPSDPPEPPPHDAAPPRVGEGWPEAEEPPAGAGPGAAGEGPRPRLAFAPSAVGRLQGAL
AAAQRRVTGLGQRLGHRAELAGEGRARLRELLRENRRLQDLGLQLHQRHHRVGMQLSELQ
DKATSAETKVLEMGTTLEGLQWDSAKLRKREGHLERHLAKALEQLTSGSYGCGSSGGFQG
GQITLSGQKFEMLNAELEQNQELANSRMAELEKLQLELQGALRSHERLKVALRALPEDAV
REALEYKVLQSQFSLLYHESLQVKTQLDEARGLLLATKNSHLRHIEHMESDELGVQKRLR
TEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDVQ
RYKRKLREVQAEINKLRLQASGAPPPSGPTPPPPPPTPPTPTPTPPDDPPPLKEEEGGAA
PPPGPAPPAEPKKEAAGEAPPPTPKRPAPPAEEEEPAVAPPPPPLPRPPKEAPPRPGPSP
RGPRERERPPRGGPQDEPKKKDSEALKQLRGELKKAQESQKEMKLLLDMYKSAPKEQRDK
VQLMAAERKSKAELEELRARARELEERERRESKKLADEEALRRLRAAEEQIEHLQRKLAA
TKQEEEALLSEMDVTGQAFEDMQEQNLRLLQQLREKDDANFKLMSERIKANQIHKLLREE
KDELAEQVLALKAQVDAQLLVVQKLEEKERGLQSSLAAVEKELALRTQALELNKRKAVEA
AQAAEDLRAQGEHVQGRLRELAAAAAENRAAKDKEALGLKRAQEELSRLRRKLEKQRKVE
VYADADQILQEEIKEYRARLTCPCCNARKKDAVLTKCFHVFCFECVKSRYDTRQRKCPKC
NAAFGAHDFHRVYIS
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagccggcgggaaacgcggggccggcgacgggggcagcggcccccccgagaaa
aaaccggcccgggaggagcagccgccgacgacgctgattgagccgctcaggctggggggg
atctcgtcaacggaggagatggacctgaaggtgctgcagttcaagaacaagaagctgtcg
gagcggctggagcagcggcaggcggtggaggacgagctgcgcgagcgcatcgagaagctg
gagaagcgccaggcgaccgacgacgccaccctgctgctggtcaaccgcttctggggacag
ctggaccaggaggttcagtcgctgctgagaaacaccgaggggggggaagggccggcggga
cccccccccagcgacccccccgagccccccccccacgacgcggccccgccccgggtgggg
gaggggtggccggaagcggaggagccgccggcgggggcggggccgggggcggcgggggag
gggccgcggccccgcttggccttcgcgcccagcgccgtcgggcgcctgcagggggcgctg
gcggccgcgcagagacgggtgaccgggctgggccagcggctgggccaccgcgcggagctg
gccggggaggggcgggcgcggctgcgggagctgctgcgcgagaaccggcgcctgcaggac
ctggggctgcagctgcaccagagacaccatcgagtggggatgcagctctcggagctgcag
gacaaggccacgtcggccgagacgaaggtgctggagatggggacgacgctggaggggctg
cagtgggacagcgccaagctgcgcaagcgcgagggccacctggagaggcacctggccaag
gcgctcgagcagttgacctcgggctcctacggctgcggcagctccggggggttccagggg
ggtcagatcacgctcagcggccaaaagtttgagatgctgaacgcggagctggagcagaac
caggaactggccaacagccgcatggccgagctggagaaactgcagctggagctgcagggg
gcgttgaggagccacgagcgcctcaaggtggctttgcgggccctgcccgaggacgcggtt
cgcgaggccctggagtacaaggtgctgcagtcccagttctccctcctgtaccacgagagc
ctccaggtgaagacgcagctggacgaggcgcgggggctgctcctggccaccaagaacagc
cacctgcgccacatcgagcacatggagagtgacgagctgggggtgcagaagcggctgcgc
accgaggtgatccagctggaggacacgctggcccaggtgcgcaaggagtacgagatgctg
cgcatcgagttcgagcagaacctggcggccaatgagcaggcgggccccatcaaccgcgag
atgcgtcacctgatcagcagcctccagaaccacaaccaccagctcaagggtgacgtccag
cgctacaagcggaagctgcgggaggtgcaggcggagatcaacaagctccgcctccaagcc
agcggggcccctcccccctccggccccaccccgccccctcctccccccaccccccccacc
cccacccccacccccccggacgacccccccccattgaaagaggaagagggcggggccgcc
ccccccccaggccccgcccccccggcggagcccaagaaggaagcggccggggaggctccg
ccccccacccccaaacgccccgcccccccggccgaggaggaggagccggcggtggccccg
ccccccccgccgttgccccgcccccccaaggaggccccgccccggcccggcccctccccc
cggggaccccgcgaacgcgagcggcccccccgggggggaccccaggacgagcccaagaaa
aaggattcggaggcgctgaagcagctcaggggggagctcaagaaagcccaggagagccag
aaggagatgaagctgctgctggacatgtacaaatcggcgcccaaggagcagcgggacaag
gtgcagctcatggcggccgagaggaagagcaaggccgagctggaggagctgcgcgcgcgg
gcgcgggagctggaggagcgcgagcggcgcgagagcaagaagctggcggacgaggaggcg
ctgcggcggctgcgcgcggccgaggagcagatcgagcacctgcagcgcaagctggcggcc
accaagcaggaggaggaggcgctgctgtcggagatggacgtgacgggccaggcgttcgag
gacatgcaggagcagaacctgcggctgctgcagcagctgcgcgagaaggacgacgccaac
ttcaagctcatgtcggagcggatcaaggccaaccagatccacaagctgctgcgcgaggag
aaggacgagctggccgagcaggtgctggcgctcaaggcacaggtggacgcccagttgctg
gtggtgcagaagctggaggagaaggagcgggggctgcagagcagtttggccgccgtggag
aaggagctggcgctgcgaacccaggccctggagctcaacaagaggaaggcggtggaggcg
gcgcaggcggccgaggacctgcgggcgcagggcgagcacgtgcagggccggctgcgggaa
ctggcggcggcggcggccgagaaccgagcggccaaggacaaggaggcgctggggctgaaa
cgggcgcaggaggagctgtcgcgcctgcgccgcaagctggagaagcagcgcaaggtggag
gtttacgccgacgccgaccagatcctgcaggaggagatcaaggagtaccgggcccgcctg
acctgcccgtgctgcaacgcccgcaagaaggacgccgtcctcaccaagtgcttccacgtc
ttctgcttcgagtgcgtcaagagccgctacgacacccgccagcgcaagtgccccaagtgc
aacgcggccttcggcgcccacgacttccaccgcgtctacatcagctga
DBGET
integrated database retrieval system
