Caloenas nicobarica (Nicobar pigeon): 136002887
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Entry
136002887 CDS
T11056
Symbol
SF1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1
KO
K13095
splicing factor 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136002887 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
136002887 (SF1)
Spliceosome [BR:
cnic03041
]
Complex A
Other components
Complex A specific factors
136002887 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
zf-CCHC_5
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
136002887
NCBI-ProteinID:
XP_065514206
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLN
TREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGL
LIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMDNV
KKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTETRSITN
TTVCTKCGGAGHIASDCKFARPGDPQSAQDKARMDKEYLSLMAELGEAPVSVSSNAAHNN
SPLSSSHRASQPSSQPPPSRPPWMNSSPSESRPYHSMHGGGPHSFPHPMAGMGGGGGHGG
GGHPLQHNPNGPPPWMQPHPPMGQGPHPPGHPGPHHMDQYLGNAPVGSGVYRLHQGKGMM
PPPLGMLPPPPPPPGGQPPPHSGPLPPWQQQPPPPSSSSTPLWQPSTTTTTSAGSASLPP
WQQQGGGAAGGAAAASSGAPPLPASPSMVPLPPGVQPPLPPGAPPXPPPPPGSGGMMYAP
PPPPPPPPPMDPSNFVTMMGMGVPAMPPFGMPPAPPPPPPQN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcccacggtgatcccgcccgggctgacccgcgagcaggagcgcgcctacatcgtgcaa
ctgcagatcgaagacctgacccgcaaactgcgcacgggagacctggggatcccccccaac
cccgaggacaggtccccgtcccccgagcccatttacaacagcgagggcaagcggctgaac
acgcgcgagttccgcacgcgcaagaagctggaggaggagcggcacaacctcatcaccgag
atggtggcgctcaaccccgacttcaagccccccgccgactacaagccgccggccacgcgc
gtgagcgacaaggtgatgatcccgcaggacgagtaccccgagatcaacttcgtggggctc
ctcatcgggcccagggggaacacgctgaagaacatcgagaaggagtgcaacgccaagatc
atgatccgcgggaagggctcggtgaaggagggcaaggtgggccgcaaggacgggcagatg
ctgccgggcgaggacgagccgctgcacgccctggtcaccgccaacaccatggacaacgtc
aagaaagccgtggagcagatccgtaacatcctcaagcaagggatcgagacgcccgaggac
cagaacgacctgcgcaagatgcagctgcgggagctggcgcggctcaacgggacgctgcgg
gaggacgacaaccggatcctgcggccctggcagagcaccgagacgcgcagcatcaccaac
accacggtctgcaccaagtgcggcggggctgggcacatcgcctccgactgcaagttcgcc
aggcccggggacccgcagtcggcgcaggacaaggcgcggatggacaaggaatacctgtcg
ctcatggccgagctgggggaggcgccggtgtccgtcagctccaacgccgcccacaacaac
agccccttgtccagcagccaccgcgccagccagcccagcagccagccccccccgagtcgc
ccgccctggatgaacagcagcccctcggagagccgcccgtaccattccatgcacgggggg
ggaccccacagcttcccccaccccatggcggggatgggggggggcggcggccacggcggg
ggggggcaccccctgcagcacaaccccaacgggccccccccctggatgcagccgcacccc
cccatggggcagggcccccacccccccggccacccgggcccccaccacatggatcagtac
ctgggaaatgcgccagtgggctctggggtctatcggctgcaccagggaaaaggtatgatg
ccgccgccgctgggtatgctgcccccgccgccccccccgcccggtgggcagccgcccccc
cactccggccccctgcccccctggcagcagcagccgccgccccccagcagcagcagcacc
cccttgtggcagccaagtacgacgaccaccacgagcgctggcagcgcctccctcccgccc
tggcagcagcagggggggggtgcggcggggggggcggcggcggcttcttcgggggccccc
ccgctccccgccagcccctccatggtgcctttgccccccggggtgcagcccccgctcccc
cccggggcccccccgncccccccgccgccccctggctccgggggcatgatgtacgcgccc
cccccgccccccccgccgcccccccccatggacccttctaatttcgtcaccatgatgggc
atgggggtgcccgccatgccccccttcggcatgccccccgcgccccccccgccgcccccc
cagaactga
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