Caloenas nicobarica (Nicobar pigeon): 136003023
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Entry
136003023 CDS
T11056
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
136003023 (DDX17)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136003023 (DDX17)
Spliceosome [BR:
cnic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
136003023 (DDX17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
136003023
NCBI-ProteinID:
XP_065514372
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Position
1:complement(40065418..40085958)
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AA seq
655 aa
AA seq
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MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAAAYGTSGYSTAEYSASGYGASTTAATAGRTSQSTT
QQQYAGMVGRSGQQPQPLMSQQFPQPPGTSVMGYMGQTATYQYPPPPPPPPPSRK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcttcggggaccggggccgcgaccgagaccgcggcgggtttggagcaagtcgt
ggaggtcctcttcctccaaagaaatttggtaatccaggtgaacgtttacgtaagaaaaaa
tgggatttaaatgaactgcctaagtttgagaagaatttttacgtggaacatccggaagtg
gccaggcttactccgtacgaagttgaagaattgcgaagaaagaaagagataacaattcga
ggaatggagggctgccccaagccggtgttcgccttccaccagtgtagctttccgcagtat
gtgatggatgccttgatggaccaaaacttcacggaacccactccaatccagtgccaaggc
tttcctctagccctcagtggtcgtgatatggtgggcattgcgcagactggctctgggaag
acactagcttacttgttgcctgcaattgttcacatcaaccaccagccatatttggagaga
ggagatggcccaatctgtctggttctagcacctactcgagagttagcccagcaggtgcag
caggtggctgatgattacggcaaatgttcaagactgaagagtacctgcatatatggagga
gcacccaaagggccccaaatcagagatctagagagaggtgtggagatctgcattgctaca
ccaggccgcttgattgatttccttgaggcaggaaagactaaccttcgtcggtgtacgtac
ctggtgctggatgaagcagacaggatgttggacatgggatttgaaccccaaattcgtaaa
attgttgaccagataaggcctgacagacagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgctgaggactttctgcaggactatgttcagattaacgtgggaaac
ctggagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagtgag
aaagaccataaactgatacaactgatggaagaaatcatggcagagaaggaaaacaaaact
atcatctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcagccagaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagacgtggaagatgttaaatttgtgataaactacgactacccgaacagctctgaagat
tatgtgcaccgtattggccgtaccgcacgtagtaccaacaaaggtactgcctacaccttc
ttcacaccaggaaacttgaaacaagccagggagcttatcaaagtgttggaagaagccaat
caagccatcaatccgaaactgatgcagcttgtggaccacagaggaggaggaggtggtggt
ggaggaggtcgttctcgttaccgaacgagcagttcggtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcgggtggc
ttcagagaccgtgagcgtggtgacagttatgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattctgcttttggggcagcgcagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatagcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccaccgctgggagaacctcacagagcactacc
caacagcagtatgcagggatggtggggcgctcaggccagcagccacagccgctcatgtca
caacagtttccacagccccctggcactagcgtgatgggctatatgggacagactgccacc
taccagtatcctccccctcccccaccccctcccccctcccgcaaatga
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