Caloenas nicobarica (Nicobar pigeon): 136003071
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Entry
136003071 CDS
T11056
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnic03009
]
136003071 (UTP20)
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
136003071 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
136003071
NCBI-ProteinID:
XP_065514435
LinkDB
All DBs
Position
1:complement(43944936..44011526)
Genome browser
AA seq
2800 aa
AA seq
DB search
MKSKSSAHKSGNTHRFLTFSERLSNVNIDIIHRIDRTGSYAEEVETYFFEGLRKWRELNL
TQHFVQFYNEVANKCQSFNQLVYYQSAIVQSLKTHLQVKGSLAYQPLLDLVVQLARDLQA
DFYPHFYDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLLRKVSDKNVIFNLMLRDLGEHPGKVEGVGQLLFEMCKGVRNMFH
SCAETALKIILLKLGPVTEEEIELPWVAVGEAFERMIRSAVLHIHREHFDVVFKCLEESL
LDLQRKITKANCCMASEQIERILQAYLILVEHANGSKVPVPEDVCQILIKMLQTPDLSSS
CCKTLLKTISALLLAENVFLPDTLTKEAIEKVFASGFERSLLLDFSEAMFAMKQFERHFL
PCFLEYIEHCFSGTDTLAKDEAMAILAKLILVKAEPPTTGSMAFEKYPLIFTESSVSSNT
RQQTSKRQGEKAKVPVLDHVLSLIHLPEKEDITDLSQPWVALVVLPHIRPVDKGNILHHV
TSFINSLFTAIDKGSLCKGSLFVACQAVSTLLSLVESSEILHLLPVERVESLVTTFPSDP
SALLLADLYYTRLALCGCQEPLSQGKLMDLFEKLHPNISTGVSKVRLLTVRILNHFENLP
SAQIKGDGIGELQPVFAVLLQAELMPATVNDYREKLLHLRKLRYDIVQSTIPSGSLQEVP
LRYLLGMLYINFSPLWDPVIELITSHAKEMENKQFWKVLYEHLERAATYAEMELQNELDE
QEESIAEMESEKIPEGRVGTVFLEQLRTRTDSSDRLDHTNFRFLLWKALDKFPDRVEPRS
RELSPLLLRFIRNEYYPADSLVAPSQDLRKKTSGTVAVAAAAAKEISGEEVNDVAMEEEE
EEEKEEEEPITIGLPKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEHKLYALYTQLLSHQ
DQNVQRIALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEETAVVKMEHRPDL
IPVLMRVLYGRMRNKTGSKTQGKSSASTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFS
NGPCQTAVLRSMSELDLAKVLPLGRQHSLFNGLEIVLKNMGHLIHQYLPEILQILLCMTA
VVSCILQQREKVQPRLINPLKNLRRLGLKLVGEFFSDYETYSFSVNEIDAVFHAVVWPQV
CRLASESQYSPTFLLKLIHTWSKNPRYFPLLAKQKPDHPECDILTNVFAVLSAKNLSEAT
SSLVMDIADSLLNSPDFEPTEQVSSLSVTDCVVMVTGDVTEETLSLGCRLVLPHVPAILQ
YFSKTMLNVEKVKKKKYRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQSNMEQG
TEIDILETVQNLLRHCSNPTSFLKPLAKLFSVIRNKLSRHKLCSVFQTLSELDSELKYIT
DVVKLNAFDQRHLDDIDFDVRLSAFQSITARIKDMQAVDIDFLIPVMHNCFYTIQLGDMA
LSDNASLCLTSLIHQLAEIDHTENDYKELIQHTLLESVRRGLKSKTESIQQEYTSLLSCL
IQTFPANPEFQDLVQLTNCHDPDMDFFENMKHMQIHRRARALRKLAKQLTEKTLVLSSKS
LQNYIMPYATTAIFDEKMLKHENMVTASVELIGAVCRHLSWSAYLYHLKHFIHVLQTGQI
SPKLGVSLLEMVLEAFHFDHETLEKQLVTIDSQEAAAVDLKPVVEAEEAMELEQSEGEEE
VVEEKKGKNPLEVPAEPEQAAETSEDAEQVTKPVSFLPRNKEELECLIKHIQDTVTVNIL
PKLHRCIVAKVKRDEEHKLVKSNVVNDDEVVRIPLAFAMVRMMQCLPQEVMEANLPSILL
KVCTFLRNRFQEIRDIARNTLTKIMEVLGVQYLLYILKEMKSTLVHGYQLHVLTFTVNLL
LKGLTTRLSAGDLDPCLDILIEIFNQELFGNIAEEKEVKGIISKVMEARKSKSYDSYEIL
GKFIGKGQVTKLILPLKEVLESTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHG
LISENLPLLTEKAKKKVAPPPDPRLQPESCLLLQPTPTRGGQKACVSSRTNTYILVDSGL
RLLHMSLKRSKVNSSEEHALEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSI
STNLEPLIKQLFLLLKEFAKTGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLLG
FAEEDIYDSSRQATAFGLLKAILSRKLIVPEIDDVLQKVAQLAITGQSEPVRVQCRQIYL
KYILDYPLGDKLKPNLDFILAQLEYEYETGRESALEMIAYLLDMFPQDLLHKYCGLFFLS
LCMMMINDDSAKCKKMAALTCKSLLSKISSEKQDLMFSLVTEWFPSKKSSHRRLAAQACG
LFVEVEGVMFERRLEAVLTLIEKEINPVKFEHITEEEEEKAADRLLFSFLVLVKKLITEC
NFIQLTKNSALVSNIWGHVQSHLWYPHSWVWLTATEIFGLLFASNKPEDLVNKWRKRKAG
KRKKASAELSASTVILTAELDKKMKELAFAFCHQLQSKFLDVSLGEQVIKNLLFVAKVVY
LLAPASEESKEAEGKLSCEGEEQETSEVEEEKDISAEGAGGKEDTEEKGQPATLLWLMKK
LSLMAKREAAYSPKVPLKRSCIFKFLGAISVDLGKDRIKPYLPTILTPLYRELNSTYAEQ
DPTLKNLSQEIIELLKKLVGLEAFSLAFSAVQKQANQKRVMRKKQRALQTVANPDIAARR
KLKRHKNKAETRKRKIEFLRPAYKAKRPRSHALKDLAMVE
NT seq
8403 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagtcctcagcccacaagtcggggaacactcaccggtttcttaccttttcg
gagcgcttaagcaatgttaatattgatattattcatcggattgacagaactggaagctac
gctgaggaggttgaaacctacttttttgaaggactacggaaatggagggaactgaacctc
actcagcattttgtgcaattctacaatgaagtggccaacaaatgccagtccttcaaccag
ctggtctactatcagagtgccattgtgcagagcttgaagacacatttgcaagtcaaaggc
agtcttgcttatcagcccctattagatctagtggtgcagttggctcgagatcttcaggct
gatttctatcctcacttttatgactttttcctggccatcaccaagttactggatacacag
gacacagagctgctggaatgggcttttacctctctttcctatctctacaagtacttgtgg
aggttgatggtgaaggacatacacaacatatacagcctgtacagcaccctgctggctcac
cacaagcttcacatcagaaactttgctgctgaaagttttgtctttctactgagaaaggtt
tctgataaaaacgtgatcttcaatttaatgctccgtgacttaggggagcaccctgggaaa
gtggaaggtgtaggacagctacttttcgagatgtgcaagggtgttcgaaacatgttccac
tcttgtgcagagacggctctgaagataattctgttaaagctgggccctgttactgaagaa
gaaattgagctaccatgggtagctgtaggagaagcctttgagcggatgatcagatcagct
gtactgcatatccatagggagcattttgacgttgtcttcaagtgcctagaggagtcactc
ttagacttgcagaggaaaataactaaggccaactgctgcatggcttcagagcagatagaa
aggattctgcaagcttatcttatcctagtggaacatgcaaatggatccaaagtcccagtg
cctgaagacgtctgtcagattttaataaaaatgttgcaaacaccagatctctcgtcatct
tgctgcaagaccctgctgaagaccatttctgcattgctactagccgagaatgttttcttg
cctgatactttgaccaaggaagctattgagaaggtatttgcaagtggatttgaacggagc
cttcttttggacttctccgaagcaatgttcgcaatgaagcaatttgagaggcattttctt
ccatgctttctagaatacattgagcattgcttctctggcacagataccctcgcaaaggat
gaggccatggcaattctggctaaactcattctggtgaaagcagagcctcctaccactggt
tcaatggcatttgaaaagtatcctctcattttcactgaatcatctgtcagctctaataca
aggcaacaaacaagtaaaagacaaggagaaaaggcaaaagtaccagtgttggatcatgta
ctgtctttaatccatttaccagagaaggaagacatcactgacctttcacagccttgggtt
gccttggttgtactgccacatattagaccagtggacaaaggaaacattctgcaccatgtg
acaagttttataaactctctcttcacagccattgacaaaggaagcctctgcaaaggaagc
ctgtttgtggcctgccaagctgtaagtactcttcttagtctggtggagtcttccgaaata
ctccatttgttacctgtggagcgtgtcgagagcttggtgaccacttttccttcagatccc
tctgcgttgctgttggctgatctctattatacgaggttggcattgtgtgggtgccaggaa
cccctttcccaagggaagctaatggacttgtttgagaagttacatcctaatatttccact
ggcgtttccaaggtacggctattgaccgttcgaattctaaaccatttcgagaatctacct
tctgcacagattaagggtgatggcataggggagctccagccagtatttgctgtattgctt
caagcagaacttatgccagcaacagtgaatgattacagagagaaacttctccatttgagg
aaactaagatatgatatagtacagtctacaataccaagtggatctttgcaggaggtgcct
cttcgatatttactgggaatgctttatattaacttcagccctctctgggatcctgtaatt
gaactcataacttctcatgcaaaggaaatggagaataaacagttctggaaggtcttatat
gaacatttggagagggctgctacctatgctgaaatggagctgcaaaatgaactagatgaa
caggaggaaagcattgctgaaatggaaagcgagaaaataccagaaggaagggtggggact
gtcttcttggagcagctgaggactagaacagatagcagtgatcggctggaccacacaaac
ttccgttttctactgtggaaagcactggataagtttccagacagagtggagcctaggtcg
agggaactttccccacttcttttgagatttattagaaatgagtactacccagcagattca
ttagtggctccatctcaggatcttagaaagaaaactagtggtacagtagcagtagcagca
gcagcagcaaaagaaatatctggtgaagaggtaaatgatgttgctatggaggaggaggag
gaagaagaaaaggaagaagaggaaccaattacaataggactaccaaaaaagaaaacaaga
agagctgctgctaagcaactaatagcccacttacaagttttctctaaattctcgaatcct
cgtgcattgtatctggagcacaagttgtacgcattatatacccagttgctgtcccatcaa
gaccagaatgtacagagaatagctcttgactgtataatgacatacaagcatcctcaccta
ctgccatacagggagaacttgcaaaggctactggaggacaagagttttaaagaagaaata
gtccatttcagtatttctgaggagactgcagtagtaaaaatggagcatcgaccagatctc
atccctgttcttatgagagttctctacggcagaatgagaaacaaaacagggagcaaaacg
cagggcaagtcttcagcgagcactcgcatgtcaatcgttctgcgatttcttgctggctcc
ctgccagaagagatacggatgttcttggatctgctctttgaagctgtgaagcaattcagt
aatgggccttgccagactgcagtgcttcgaagtatgtcggagctggatttagctaaagtc
ctgcctcttgggcgtcagcatagcctcttcaatggtctcgaaattgtgttgaaaaacatg
ggacatttgatccatcagtacctgcctgaaattctacagattctgctctgcatgacggct
gtggtatcctgcatcctccagcaaagagaaaaggtccaacctagattgattaatccactg
aagaatttgagacgtcttggactcaagcttgtgggggagtttttttctgattatgagacc
tacagctttagtgtgaatgagattgatgcagttttccatgcagtggtgtggcctcaggtc
tgcagattggcttcagagagtcagtattctccaacttttctgctcaaactcattcacacc
tggagtaagaatcccaggtatttccctttgctggccaagcagaagccggatcacccagag
tgtgatatactgacaaacgtgtttgctgtgctgtcagccaagaatctctctgaggccaca
tccagtcttgtgatggacatagctgatagccttctcaacagcccagattttgaacccacg
gaacaggtttccagtttgagcgtgactgactgtgttgtcatggtcactggagacgtgaca
gaagagaccctcagccttggttgccgcctggttctgcctcatgttcctgccatacttcag
tacttcagcaaaacaatgttaaatgtggagaaggtgaaaaagaagaagtatagagctcaa
gtcagcaaagagctgagtatactttccaagatcagcaaatttatacaagaaaagagtcag
aattcggtgcttgtgagccttctcctccctttcctttatcagagtaacatggagcagggt
acagagattgacattctggagacagtgcagaacttgctgaggcattgctcaaacccgaca
agctttctcaagccactggcaaagcttttttctgtcatccgaaacaaactgtctcgacat
aagttgtgctctgtatttcagactttatctgaattggacagtgaactgaaatatattact
gatgttgttaagctgaatgcctttgatcaacggcatctcgatgatatagactttgatgta
cgtctgtcagcattccagtcaatcacagctcgcatcaaggacatgcaagcggtggatatc
gatttcctcatacctgttatgcacaactgcttctatacgatccagctgggggatatggct
ctcagtgacaatgcaagcctttgcttgaccagtttgatccatcaactggcagaaatcgac
cacacagagaatgactacaaggagctaatccagcacactctcctggagtctgtgagaagg
gggctgaagagtaagactgagagcatccaacaggagtacacatcattgctttcctgcctc
attcaaacgttcccagcaaatcctgaattccaggatttggtccagttgaccaactgccat
gatcccgacatggacttctttgagaacatgaaacacatgcagatccacaggagggcacga
gctctgaggaaactggctaagcagctcactgaaaaaacacttgtgctgtcttctaaatct
ctgcagaactacatcatgccttatgctaccactgccatttttgatgaaaaaatgcttaag
catgaaaatatggttacagcctcggttgaacttattggagctgtctgccgacatctctcg
tggtcagcgtacctgtaccacttaaagcatttcatccatgtcctgcaaacaggacagatc
agtccaaagctgggagtcagcttgttagagatggtgctggaagcctttcactttgaccat
gaaacgcttgaaaagcagcttgtgaccattgacagccaagaagctgctgctgtggacctt
aagccagtggtggaggctgaagaagccatggagctggagcagagtgaaggggaagaggag
gttgttgaggaaaagaaaggaaagaatccgcttgaggtgccagcagaacctgagcaagca
gctgagacatctgaagatgctgagcaagtgaccaaacctgtttctttcttaccccgaaat
aaagaagagctggagtgtctgatcaaacacattcaagatacagttacagtcaacatcttg
cctaaattgcacaggtgtattgttgcaaaggtaaaaagagacgaggaacacaagcttgtg
aaatctaacgtcgtgaatgatgatgaggtagttcgcattccattagcttttgcaatggtc
aggatgatgcagtgtcttccccaagaggtgatggaagccaacctgccaagcattctgctg
aaagtctgcacatttctgaggaacagatttcaggaaatccgggacatcgcccgtaacacc
ctcactaaaatcatggaagtgttgggagtgcagtaccttctgtacatcttaaaagaaatg
aagtccactcttgtccatgggtaccagctccatgtgctcactttcactgtgaacctgtta
ctgaagggccttactaccaggctcagtgctggtgatttggacccctgcttagatatcctg
attgagattttcaaccaagagttgtttgggaatatagctgaagagaaagaagtgaaggga
attatctccaaggtcatggaagcacgtaagagcaagagttacgattcctatgaaattctt
gggaagttcataggaaagggccaggtgacaaaactcattctgccactgaaagaggttctg
gagagcaccacaagcctgaagatagtccggaaggtgcatgaggcgctgcgtcacatcatg
gcagggctgatcttcaattctgacatgaatgcagaatccctcctcctcctcagtcatggt
cttatcagtgaaaacttgcctctgctcactgagaaggccaaaaaaaaagttgcacctcct
ccagatcctcggctgcaaccagagagctgcctgctgctccagcccactcccacgagagga
ggccagaaggcatgtgtcagcagcaggactaacacatacatcttggttgattcaggactt
cggcttctgcacatgagcctgaagaggtccaaagtaaattcttctgaggaacatgctttg
gaaatgttggatccttttgttcagctgcttatagactgcctgaaatctatggatgtcaag
gtgataactggtgctctgcagtccttggtatggattttaaagttccctttgccttctatc
agtacaaatctggagccactgatcaagcagcttttcctcttgctgaaagaatttgccaag
acaggaatagccaaaggccagaatttccacctggttgtgagctgtttcaaatgtgtaaca
atacttgtcaagaacgcaaagagccagataacaagcaaacagctccaagtgttgcttggc
tttgctgaagaggacatttatgattcatcacgccaagccactgcctttggccttctcaag
gctattttatccaggaaactgattgtccctgaaattgatgacgtgctgcagaaggttgcc
cagctggccatcacgggtcagagtgagccggtgcgagtccagtgcaggcagatttactta
aaatatattctggactacccccttggtgacaagctgaaacccaatttggatttcatactc
gcacaactggagtatgagtatgaaactggaagggaatctgcgctggagatgatcgcgtac
ctcctcgacatgttcccacaggatctactccacaaatactgcgggctgttttttctctcc
ctttgtatgatgatgataaatgatgactctgccaaatgcaaaaagatggcggctttgacg
tgtaaatctctcctcagtaagataagcagtgaaaagcaggatctgatgttttcgctggtc
acagagtggtttcccagcaagaagagctcacacaggaggttggctgcccaggcatgtggt
ttgtttgttgaagtggagggagtaatgttcgaacggcggcttgaagctgtcctcaccttg
attgaaaaagaaatcaacccagtgaaatttgaacacataactgaagaggaggaggagaag
gctgcagacagactgctattcagctttcttgttctggtaaaaaagctaatcacagagtgc
aacttcattcagttaaccaagaacagtgctcttgtgagcaatatctggggtcatgtccag
tctcacctgtggtatcctcacagctgggtctggctgacagctactgagatctttggcctg
ttgtttgcatctaacaagccagaagatcttgtcaacaagtggaggaaaagaaaggcaggg
aagaggaaaaaggcatcagcagagctctctgcatccacagtcatcttgactgctgaactg
gacaaaaagatgaaggaacttgcatttgctttctgccatcagctgcagtccaagttcctg
gatgtgtctctgggagagcaggttataaagaatttgctttttgtggccaaagttgtttac
ttgttagcccctgcctcagaagaaagtaaagaggctgaaggaaagctcagctgtgaaggg
gaagagcaggagacctcagaagttgaggaagagaaagacatttctgctgaaggagcggga
ggaaaagaggacacagaagagaaaggccagccagccacgttgctgtggctgatgaagaag
ctctctctcatggcaaagcgagaagcagcatattcccctaaggtccctctgaagagaagc
tgcatctttaagttcctgggagcaatctcggtggatctggggaaagacaggatcaagccc
tacctcccgacaattctcacccctctgtacagggagctgaacagcacctatgcagagcaa
gatccaacactgaagaacctttcccaagaaatcatagaactgctcaagaagttagttgga
ctggaggctttttcacttgccttctctgctgtgcagaaacaggccaaccagaaaagagtg
atgaggaaaaagcagagggctctgcagactgtggcaaaccctgacattgctgcaaggagg
aagctgaagagacataagaataaagcagaaaccaggaagagaaaaatagaattcctgcgc
cctgcgtacaaggccaagagacctcgaagtcatgcactgaaagatttagcaatggtggaa
tga
DBGET
integrated database retrieval system
