Caloenas nicobarica (Nicobar pigeon): 136003240
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Entry
136003240 CDS
T11056
Symbol
NYX
Name
(RefSeq) nyctalopin isoform X1
KO
K08129
nyctalopin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cnic00535
]
136003240 (NYX)
Proteoglycans [BR:
cnic00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
136003240 (NYX)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
DHU1_N
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
136003240
NCBI-ProteinID:
XP_065514732
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Position
1:117074134..117078862
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AA seq
472 aa
AA seq
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MFAIILNVLLWVPHVHAVWACVRSCPANCVCTQERSCSVLCDRAGLGQIPSQFPCEASSI
NLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLVELKMAHNEYIRYLH
TRTFTALRRLVKLDLADCNLFNIPDRIFIELHALQELFCFQNNFRRIPGAIRGMENLTHV
YLERNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCQKMEYLYLNDNLISELPE
NSFDGLRCLKMLNLGGNFLRNISNTWFRDLGELEVLYLDRNRINYIEEGAFENLTSLVAL
HLNSNNLTTLPFSVFQPVYFLGQLYLFRNPWECDCRIEWLKEWMENYRLVRDIPCASPSS
VAGIDLIDVLYERSPEGYCLDPVELNFTSEGPTPSEEPWSTTESKFNSLITKLLLQMGLP
EEVANATEVFSNTTQLDGLTGGVSSGMGEDSIEAAFSFYLAALFTVIVLQIK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccatcattttaaatgtgctcctttgggtcccccatgtccacgcggtgtgggcc
tgcgtgcggtcctgccctgccaactgtgtgtgcacccaggagcggagctgctccgtcctc
tgcgatcgtgccggtctggggcagatccccagccagttcccttgtgaagcctcctctatc
aacctggacaaaaacagcatcaagttcctctcagagagagcctttgggaccttgccttcc
ctcaaatccctgtcgctcaaccacaacaatatttccttcatcaccccgggggctttcaag
ggtctgcccagcttggtggagctgaagatggcccacaacgagtacattcggtatctccac
acacggactttcacggctctcagacggctggtcaagctggacctagcagactgcaacctt
ttcaacatcccagacaggatcttcattgagctgcatgctctgcaggagctcttctgcttc
cagaacaacttccggaggatcccaggtgccatcaggggcatggagaacctgacccatgtt
tacctggagagaaacaggatcgaagcggtagcctataactccttgcagggcctgaccaag
ctgaaatacctgaatctgcaggacaacaggataaatgttgttcacgaacgagcttttcag
ggctgccagaagatggagtacctgtacctgaatgacaatttgatcagcgagcttccagaa
aactcctttgatggcctgaggtgcctgaagatgctcaacctggggggaaatttcctcaga
aacatttccaacacgtggttcagggacttgggggagttggaggtcctctacctggaccgc
aacaggatcaactacattgaggaaggggcttttgaaaacctcaccagcctggttgcgttg
cacttgaacagcaacaacctgacgaccctgcccttttctgttttccagcccgtgtatttc
ttggggcagctgtacctcttccgcaacccctgggagtgcgactgccgcatcgagtggctg
aaggagtggatggagaattacaggctcgtcagggatattccctgtgcctccccctcctca
gtagccgggattgacctgatagatgtgctctatgagagatcaccagaaggttactgtctc
gacccagtggagctaaatttcacgtctgaaggcccgactccaagcgaggagccttggtct
accacggaaagcaagttcaacagccttattactaaactcttgctccagatgggccttccc
gaagaggtggcaaacgccactgaagtcttcagtaacaccacacagctggatggactgact
ggtggggtttcttctgggatgggggaagacagtattgaagctgccttctctttttacctc
gcagcacttttcacagtgattgttttgcagatcaaatag
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