KEGG   Chryseobacterium nakagawai: EG343_01375
Entry
EG343_01375       CDS       T06300                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cnk  Chryseobacterium nakagawai
Brite
KEGG Orthology (KO) [BR:cnk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnk03400]
    EG343_01375
Enzymes [BR:cnk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EG343_01375
    5.6.2.6  RNA 3'-5' helicase
     EG343_01375
DNA repair and recombination proteins [BR:cnk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EG343_01375
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AZA89374
UniProt: A0AAD1DQ17
LinkDB
Position
complement(306736..309168)
AA seq 810 aa
MTAFEHTNGFTIIQQWMKDKRISPFKFQTDTWRKFGSGYSGMVVAPTGFGKTFSVFLALI
SDFLNHPDNYKKGLKMIWITPLRSLSKDIAKAMQEAMDEIGIDWVVGVRNGDTDPKVRQQ
QVRKMPEILVVTPESLHLLLAQKNHETFFKEMKCIVVDEWHELLGSKRGVMVELGISQLR
KYVPKMQIWGITATIGNLEEAMEVLIPYDIKKTKITAKEHKKIDIIPVFPDEIEILPWAG
HLGHKLADKVVPIILDSKSTIVFTNTRSQSEMWYQLLLDAYPDFAGQIAIHHSSIDAHLR
IWIEENLSSGKLKAVVSTSSLDLGIDFKPVDTVIQVGSAKGVARFLQRAGRSGHSPFETS
KIYCVPTHSLELIEVAALKEAVKQKVVEPRDPQVLCFDVLVQFLMTLAVGNGFYPDELYK
RIKKVYAFQEMMEEEWKSILEFLTIGGSVLKNYEEFHKIVIMEDGLYKVTSRKIAMLHRM
NMGVIVSDAMLKVKFISGGYIGMIEEYFISKLKKEEKFILAGRTLEVAMMKDMTVYVRAA
KGKALVPSYLGGRLPLSSDLGRFLRERLSHALNPKASEKELKFLHPLLINQEENSHIPKE
DEFLVEMIKNREGYHLFMYPFEGRLVHEVMAALIAFRISKLAPISFSMAMNDYGFELFSD
KEIPLNEENLQQILTRDNLMNDVIASINSAEMARRKFRDIAVISGMVIQNYAGKQRSNKS
LQSSAGLIFKVLEDYDSGHFLIKQAYTEVFNMQLQEQRLVEAFKRIEKSRIILKHSRSFT
PLSFPIKVDSLRQTLSSEGLDARIKRMLKL
NT seq 2433 nt   +upstreamnt  +downstreamnt
gtgacagcttttgaacataccaacggatttaccatcattcagcaatggatgaaggataag
cgcatctccccttttaaatttcagactgatacatggcggaaatttgggagtgggtatagc
ggtatggtggtagctcctacaggattcggaaaaactttttctgtttttttagcattaatc
tcggactttttaaaccatcctgacaactataaaaaaggattgaaaatgatctggatcact
ccccttcgatctttatccaaagatattgcgaaagcaatgcaggaagcgatggatgagatc
ggtattgattgggtagttggagtaagaaatggagatacagatcctaaagtaagacagcaa
caggtcagaaaaatgcctgaaattcttgttgtaacgcctgaaagcctgcaccttctgctg
gctcagaaaaatcatgaaacttttttcaaggagatgaaatgcattgttgtagatgaatgg
catgaattgttaggttcaaaacgcggggttatggtagaattaggaatatcacaactcaga
aagtacgtgccgaaaatgcagatttggggaattacggctaccattggaaacctggaggaa
gcaatggaagtgttgattccttatgatattaagaaaacgaaaattacggctaaagaacat
aaaaaaattgatatcattcctgtttttccagatgaaattgaaatactgccgtgggcagga
caccttggtcataaacttgctgataaagtagttcccattatccttgattcaaaatccacc
attgtttttaccaataccagaagccagagtgaaatgtggtatcagttacttttagatgcg
tatccggattttgcgggccaaattgccattcaccacagttccatcgatgctcatttaaga
atctggattgaagaaaatctaagttccggaaagttaaaggctgttgtttccacttcatca
ctagacttaggaatagattttaaacccgttgataccgtcattcaagtgggctcagccaaa
ggagtcgccaggtttcttcagcgggcaggccgtagtggtcactccccttttgaaacctcc
aaaatctattgtgtacctacccattctttagagctaattgaagttgctgctttaaaagaa
gcggtaaaacaaaaagtagtagaacccagagatccgcaagttttatgctttgatgttctg
gttcagtttctaatgaccttggccgtgggaaatggattttatcccgatgagctgtataaa
aggattaaaaaagtatatgcctttcaggaaatgatggaggaagaatggaaaagtattctt
gaattcctcactattggtggcagtgttttaaaaaactatgaagaattccataaaattgtg
attatggaagatggattatataaagtgacttcccgaaaaattgccatgcttcatcggatg
aatatgggagtgattgtaagtgatgccatgctcaaagttaagtttatttccggtggttat
atcggaatgattgaagaatactttatttccaaactaaaaaaagaagaaaaattcattctt
gcaggaagaactcttgaagtggcgatgatgaaagacatgactgtttatgtgagagcagcc
aagggaaaagcactggttccgagctatcttggcggaagattacctttgagttcagatctc
ggacgttttttaagagaacggctttcgcatgctttaaacccaaaagcttccgaaaaggaa
ttgaagttcctgcatccgctattgattaaccaggaagagaattctcacattccaaaggaa
gatgaatttttggtcgaaatgattaaaaatcgtgaaggttatcatctgtttatgtatcct
tttgaaggccgtttagtccatgaggtaatggcagctttaattgcctttcgaatttcaaaa
ctggctcctatttctttttcaatggcaatgaatgattacggatttgaattgttcagtgat
aaggaaataccgttgaatgaagaaaatttacagcagatattaaccagagataatctcatg
aacgatgtaattgccagtatcaattctgcagaaatggcaagaagaaagttcagagatatt
gcggtgatctccggaatggtgattcagaattatgcaggtaaacaaagatccaataaatca
ttgcagagttcagccggactgatctttaaagtattggaagattacgattccggtcatttt
ttaatcaaacaggcctatacagaggttttcaatatgcaacttcaggaacaacgcctcgtg
gaagcttttaaaagaatcgaaaaatccagaatcattttaaaacattcccgttcctttact
cctttaagctttccaataaaggtagacagccttagacaaacactttccagtgaaggtctt
gatgctagaattaaaagaatgctgaagctttga

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