Chryseobacterium nakagawai: EG343_07960
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Entry
EG343_07960 CDS
T06300
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
cnk
Chryseobacterium nakagawai
Pathway
cnk00020
Citrate cycle (TCA cycle)
cnk00190
Oxidative phosphorylation
cnk00650
Butanoate metabolism
cnk00720
Other carbon fixation pathways
cnk01100
Metabolic pathways
cnk01110
Biosynthesis of secondary metabolites
cnk01120
Microbial metabolism in diverse environments
cnk01200
Carbon metabolism
Module
cnk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cnk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cnk_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
cnk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EG343_07960
00650 Butanoate metabolism
EG343_07960
09102 Energy metabolism
00190 Oxidative phosphorylation
EG343_07960
00720 Other carbon fixation pathways
EG343_07960
Enzymes [BR:
cnk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EG343_07960
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
Lycopene_cycl
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AZA90558
UniProt:
A0AAD1DQ94
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All DBs
Position
1778865..1780781
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AA seq
638 aa
AA seq
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MILDSKIPQGPLEQKWAYYKKKAKLVNPANRKKLDVIVVGTGLAGSSIAASLGEMGYNVK
AFCFQDSPRRAHSVAAQGGVNAAKNYKNDGDSVYRMFVDTLKGGDFRAREANVYRMAECS
LNLIDQAVAQGVPFGREYGGYLNNRSFGGVQVSRTFYARGQTGQQLLLGAYQALMRQVGK
GSVQLFSRHEMLDLVTIDGKARGIIVRNLDTGEIERHAAHAVILATGGYGKIYYLSTLAM
GCNGSAIWRAHKKGALMASPSWIQVHPTSLPQSGDYQSKLTLMSESLRNDGRIWVPLKED
ENRLPNDIPENERDYYLERRYPAFGNLAPRDISSRAAKERIDAGFGIGPLKNAVYLDFSK
AIKEQGKDKIKEKYGNLFDMYLKITGYDAYKEPMMISPSAHFSMGGLWVDYELMTTVPGL
FALGEANFADHGANRLGANSLLQASVDGYFIAPYTIANYLADEIHTGKISPDAPEFEQAE
NAVKNQIQDLMNIKGTKTVDYFHKTLGKLLYNYCGLARNEEGLKYAIQEIRKLKQEFYKD
VRVSGQGDKMNAELEKAGRVADYFEIGELMCYDALTRNESCGAHFREEYQTPDGEAMRND
AEYQFISAWAWTGENGEPELVKEPLTFEEIQPTVRSYK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgattttagattcaaaaataccacaaggcccattggaacaaaaatgggcatattataaa
aagaaagccaagcttgtcaatccggccaaccgtaaaaagcttgatgtgattgttgtagga
acaggtcttgccggaagctctatcgctgcctctttaggagagatgggatataatgtgaag
gcattttgttttcaggacagtccgagaagagcacactctgtagcggctcaaggtggagta
aatgctgctaaaaattataaaaatgatggtgacagtgtgtacagaatgttcgttgatact
ttgaaaggtggcgacttcagggcacgtgaagccaatgtgtaccgaatggcagaatgttct
ttaaaccttatcgatcaggctgtagcacaaggcgttccttttggtcgtgaatatggaggg
taccttaataaccgttcttttggtggggtccaggtaagccgtactttctatgccagagga
cagaccggacaacagttgcttctgggagcgtatcaggctttgatgagacaggttggaaaa
ggttctgtacaattgttttcaagacatgaaatgcttgatttggttacgattgatgggaaa
gcaagaggaattatcgtaagaaatttagataccggagaaattgaaagacatgcagcccat
gctgtaatattagcaaccggaggctatggaaagatttattacctgtctacattagctatg
ggatgtaatggttctgcgatctggagagcacataaaaaaggagctttaatggcttcgccg
agctggattcaggtacaccctacttcccttccgcaatccggagattatcagtctaaatta
acattaatgtctgaatcattgcgtaatgacggaagaatctgggttcctttaaaagaagat
gaaaacagactcccgaatgacattcctgaaaatgaaagagactattatctggaaagaaga
tatcctgcatttggaaacctggctccaagagatatttcgtcccgtgctgccaaagaaaga
attgatgccggattcggaattggtcccttgaaaaatgcagtgtacctggatttttccaag
gcgattaaagaacaaggaaaagataagatcaaagagaaatacggaaatttattcgacatg
tatcttaagattacaggatatgatgcttataaagaaccaatgatgatctctccttctgct
cacttctccatgggaggtctttgggtagattatgaactgatgaccactgttccgggacta
tttgcattgggagaagctaattttgcagatcatggagccaacagattgggagcaaactct
ctcttacaggcttctgtagacggatattttatcgctccttatactattgcaaattattta
gcagatgaaattcataccgggaaaatttcaccggatgctccagagtttgaacaggctgaa
aatgctgttaaaaatcagattcaagatttaatgaatatcaaaggaaccaaaactgttgac
tacttccataaaacattaggaaagttgctgtacaattattgcggactggcaagaaacgag
gaagggcttaaatatgctattcaggagatcagaaaactaaaacaggagttctataaagac
gtaagggtttccggacaaggggataagatgaatgctgaactggaaaaagcaggtcgtgtt
gctgattattttgaaatcggagagctgatgtgttatgatgctttaacccgtaatgaatcc
tgtggagctcacttccgtgaagaataccaaactccggatggagaagcaatgagaaatgat
gcagaatatcaattcatctcagcatgggcatggacaggtgaaaatggagaacctgaactg
gttaaagaaccattaaccttcgaagaaatacagccaacggtaagaagttacaaataa
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