KEGG   Chryseobacterium nakagawai: EG343_13180
Entry
EG343_13180       CDS       T06300                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cnk  Chryseobacterium nakagawai
Pathway
cnk03030  DNA replication
cnk03430  Mismatch repair
cnk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cnk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EG343_13180
   03430 Mismatch repair
    EG343_13180
   03440 Homologous recombination
    EG343_13180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cnk03032]
    EG343_13180
   03400 DNA repair and recombination proteins [BR:cnk03400]
    EG343_13180
Enzymes [BR:cnk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EG343_13180
DNA replication proteins [BR:cnk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EG343_13180
DNA repair and recombination proteins [BR:cnk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EG343_13180
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: AZA91520
UniProt: A0AAD1DRI9
LinkDB
Position
complement(2894953..2896176)
AA seq 407 aa
MYSIIDIESNGAGYRNECIIDIAIYRYDGQKITDQFISLVNPEADITPFVQKLTNITPKM
VKTAPKFHEIAKRVIEITQNTTLVGHNIDFDYRMLRQSFKRLGYDFKINTLDTIPLAKKL
IPDEVSYSLGKLVKSLGIPLTNHHRADGDARATLELFKLLISKDTENEIIQKQHEETNAK
NYINKIKQLTQDLPNEKGFVYFQDESGRIIFSDYVQDINKFSKKVFNSKSKKWEQVQKDV
EQINFELTGTDIIAKLILNSKNNKKKEVLPFGLYFRNNKYIVEKNTLNKTEKAILKFRSF
TQGTKAVQFIDAQKEYNDVAVLQQKIEFRKRNELWLGTGRKLGEKLFLIIENGKVLSFGF
YELFTQIQTLSKLAKLKINLQLSSTDLNNELQLALLRGDFETLPLPK
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgtattcaattatagacatagaaagtaatggtgcaggttatagaaatgaatgcattata
gatattgccatctacagatatgatggtcagaaaattacagatcagtttatatcccttgtc
aatccagaagcagatattactccttttgttcagaagcttaccaatatcaccccaaagatg
gtgaaaactgcccccaagttccacgaaatagccaaaagagttattgaaattacccaaaat
acaactttggtagggcataatattgattttgattacagaatgcttcgccaatcatttaaa
aggttgggttatgattttaaaatcaatactttagataccattcctttagcgaaaaaacta
attcctgatgaagtaagttattcgttgggtaaattggtgaaatcattggggattcctttg
acgaatcatcacagggctgatggagacgccagagctaccctggagctgtttaaactttta
atatctaaagatactgaaaacgaaattatccaaaagcagcacgaagaaaccaatgccaag
aattatatcaacaagattaagcaattgacacaggatcttccaaatgaaaaaggatttgtt
tattttcaagatgaatcagggaggattattttttcagactatgttcaggatatcaataaa
ttttcaaaaaaagtattcaattccaaatccaaaaaatgggaacaggttcaaaaagatgtt
gaacagattaattttgaacttaccggaacagatattattgctaaactgatccttaattcc
aaaaataataagaaaaaagaggtattgccattcggcctgtattttaggaataataaatat
attgttgaaaaaaatacccttaataaaacagaaaaagcaatcttgaaattcagatcattt
actcaaggaacaaaagccgttcagtttattgatgctcagaaagaatacaatgatgtagct
gttttacaacagaaaatagaattcagaaaaagaaatgagctttggctaggtaccggtaga
aagttaggcgagaaattatttttaattattgaaaacgggaaagtattatcttttgggttt
tatgagctctttacacagatacagacgctaagtaagcttgctaaattaaaaattaatctc
cagctgtcttcaacggatttgaacaatgagctgcagttagctcttttgcgtggcgatttt
gagaccttaccgctgcctaaataa

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