Chryseobacterium nakagawai: EG343_13185
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Entry
EG343_13185 CDS
T06300
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
cnk
Chryseobacterium nakagawai
Brite
KEGG Orthology (KO) [BR:
cnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnk03400
]
EG343_13185
DNA repair and recombination proteins [BR:
cnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
EG343_13185
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
AAA_16
ResIII
FtsK_SpoIIIE
AAA_10
AAA_30
AAA_7
AAA_19
TraG-D_C
Zot
Zeta_toxin
DUF4478
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AZA91521
UniProt:
A0AAD1DR79
LinkDB
All DBs
Position
complement(2896319..2897845)
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AA seq
508 aa
AA seq
DB search
MADKAQFIEELNARYTPKGDHIILGKGMLDGVVVPEVNVTIPLKTINRHGLIAGATGTGK
TKTLQVFAEQLSHQGIPSLVLDIKGDFSGIAEAGQMNSIIEERYAKTQLPYTPQGFPVEL
MSISGGKGVKLRATVTEFGPILLSKILQLNDTQQSIMSIVFKYCDDKGLPLIDLKDLKKV
LQYVTDNAQGKAELAANYGSIAPASLGAILRSIVALEQQGAGDFFGELSFDVQDLLETRD
GKGVVNILRVADIQNKPQLFSTFMLSLFAEIYMTFPEEGDSGKPKLVLFIDEAHLLFDEA
SKTLLSQIETMVKLIRSKGVGIYFITQIPGDVPESVLSQLGLKIQHALRGFTAKDKKEIS
KAVENYPTTEYYNASNLIQNLGIGEAFVTALDEKGIPTPLVHTYLISPESRMDVLSEAEI
TELTSSSAMVAKYEEAIDRESAYEMLTSRMEQAAQNPTSNQRARPVKEEPGMFEQVLQSQ
AGRTFTNTLMREGAKAILGMFGLGGRKR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagcacaatttattgaagaattaaatgctagatatactccaaagggagat
cacattatactagggaaaggaatgttggatggagtagtagttcccgaagtgaatgtaacc
attccattaaaaacaatcaaccgccacggtcttattgcaggggcaaccggaaccggaaag
actaaaacattacaggtatttgcagaacagctttctcatcaggggattccgtcattggtt
ttggatattaaaggtgacttttccggaattgcagaagcaggacagatgaactctattatt
gaagaaaggtatgcgaaaactcagcttccttatactccacagggattcccggtagaattg
atgagtatttcaggaggaaaaggggtgaaactgagggctactgtaacagaattcggacct
attttattaagtaaaattcttcagcttaatgatacccaacaaagcatcatgtctattgtc
tttaaatattgtgatgataaaggacttcctttgattgaccttaaagatttaaagaaagta
cttcagtatgtgacagataatgcacaggggaaagcagaacttgctgccaactatggatcg
atagcaccagcttctttgggagccattctaagatctattgtggcattggaacaacaaggc
gctggagatttctttggtgaactaagctttgatgttcaggatttattagaaaccagggat
ggaaaaggtgttgttaatattctaagagtagcagatattcagaataaaccgcaattgttt
tctacctttatgctttctctttttgcagaaatctatatgacctttccggaagaaggagac
agtggtaaaccgaagcttgtattatttatagatgaggcacatttgctttttgatgaagca
tcaaaaactcttctttcacagattgaaacgatggtaaagcttattcgttcaaaaggggtg
gggatttattttattacccagattcctggtgatgtacctgaaagtgttttgtctcaacta
ggattgaaaatacagcacgctttgagagggtttacagcaaaagataaaaaggaaatttcg
aaggccgttgagaactatccaaccacagaatattataacgcttccaatctgattcagaat
ttaggtattggtgaggcattcgttacagctctggatgaaaaaggaattccaacaccgttg
gttcatacttatctaatttctccagaatccagaatggatgttttgagtgaagcggagatt
acggagttaacatccagttcagcgatggtagccaaatatgaagaagcaatagatagagag
tctgcttatgaaatgttaaccagcagaatggagcaagcagcccaaaatccaacatccaac
cagagagcaaggccggtaaaagaagagccaggaatgtttgaacaagtgttgcagagccag
gcaggtagaacttttaccaatacactaatgcgggaaggtgcaaaagctattcttggaatg
tttggtcttggaggtagaaaaagataa
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