Chryseobacterium nakagawai: EG343_19050
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Entry
EG343_19050 CDS
T06300
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cnk
Chryseobacterium nakagawai
Pathway
cnk03420
Nucleotide excision repair
cnk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EG343_19050
03430 Mismatch repair
EG343_19050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnk03400
]
EG343_19050
Enzymes [BR:
cnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG343_19050
DNA repair and recombination proteins [BR:
cnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EG343_19050
MMR (mismatch excision repair)
Other MMR factors
EG343_19050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZA92550
UniProt:
A0AAD0YNN2
LinkDB
All DBs
Position
4176440..4178773
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AA seq
777 aa
AA seq
DB search
MDYLKGLNESQYEAVTSLQGPLMVLAGAGSGKTRVLTMRIAHLIYNGIDPFNILALTFTN
KAAREMKDRIAKVVGDSNARSLWMGTFHSVFARILRIEGHNLGYPSNFTIYDQQDALNVI
KKVLKDMNIDADLYKPKKVQARISTYKNNLITVKAYFNNPELMEADEKANMKFIGQIYQK
YVEACFRNGSMDFDDLLLKTNELLTRFPEVLAKYQDRFRYIMVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAITVSLEQNYRSTQNIVNAANVV
IAKNLQQFKKNVFSDNEEGDKIKIYRSLSDADEANFVAGNIWELRNRDQRKYSDFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIGYLRLLINENDSEALMRIINYPA
RGIGETTQNKLIVFADAQNLSVSKVLDSLPMYAPQLGLNNGVLNKLNDFWSMIKAFQVLL
KTETAYSVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQIQLEDGDPS
LSNFLENIALSADTQDKESEDDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATRE
DLEEERRLFYVALTRAEKQVFFSYAVSRFQWGKITDAEPSRFLSEIDDEYIEFLNPAMEK
RFINNSGVKSNIFDEHPSELKSFKKVEKKTLNRSEDNSKPAQEVRKLKPVSTAKIINPSG
ASSQDIEVGDKVRHDRFGVGEVTFLDGTDPQNIKAKVVFMHEGEKNLILKYAKLIKI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgaaaggactcaatgaatcacaatatgaagccgttacctctttacaagga
cctttgatggtgcttgcaggggctggttctggtaaaacacgtgtgcttacgatgcgtatt
gctcaccttatctataatggaatagatcctttcaacatccttgcccttacctttacgaat
aaagcggcccgtgaaatgaaagaccgtatcgcaaaggtagtaggagacagcaatgcaaga
agcctttggatgggaacttttcactccgtttttgccagaattttaaggattgaagggcat
aatcttgggtatccttccaactttaccatttacgatcagcaggatgcgctgaatgtgatt
aaaaaagtattgaaggatatgaatatcgatgcagatctttataaacccaaaaaagttcag
gcaagaatttctacttataaaaacaacctgattacagtaaaagcttatttcaacaatccg
gaactgatggaagctgatgaaaaagcaaatatgaaatttatcgggcagatttatcaaaaa
tatgttgaagcctgtttcagaaatgggtcaatggattttgatgacctgttattaaagacc
aatgagttattgacccgttttccggaagttttagccaaatatcaggatagattcagatat
atcatggtagatgagtaccaggatactaaccactcccagtatcttattgtgaaagcactg
gcttctaaatttgaaaatatctgtgtggtaggggatgatgcccagtctatttactctttc
cgtggagccaatatttataatatcctgaattttaaaaaggattacccggatgccatcacg
gtatctttggaacaaaactaccgttccacacaaaacattgtaaatgcagcgaatgttgtt
attgctaaaaacttacagcagtttaagaaaaatgttttcagtgataacgaggaaggagat
aaaattaaaatataccgttccctttctgatgctgatgaagcgaactttgtagctggaaat
atctgggagcttcgtaaccgtgatcagagaaagtatagcgattttgctattttatacaga
accaattctcagaccagagcatttgaagatgcactgagacgtaaaaatatcccatacaag
gtgtatggaggactttcattttaccaaagaaaggaggttaaagatttaatagggtatcta
cgtcttttaatcaatgaaaatgattcagaggcattgatgagaattattaactatccggct
agaggaattggagaaactacgcagaacaaattgatcgtttttgcagacgctcaaaacctt
tctgtttcaaaagtgctggatagtctgcctatgtatgctcctcaattaggacttaataat
ggagttttaaataagctgaatgatttctggtcaatgattaaagcattccaggtattatta
aagacagaaacggcttacagcgtggctatggaagtagctaaacgaagtggattaattaag
tttttaaaagatgaccaaactcctgaagggatatcaagagtagaaaacgttcaggaattg
atgaactcaatgcaagggtttatcgaagaacaaatacagctggaagacggagacccgagc
ctttctaatttccttgagaatattgcactttctgcagatactcaggataaggaatcagaa
gatgatatggtttctttaatgaccattcacctttccaaaggtttagagttccctgttgta
cacttggtagggcttgaagaaaatcttttcccaagtttcatgagctcggcaaccagagaa
gatcttgaagaagaaagaagattgttttatgtagcattaaccagagctgaaaaacaagta
ttcttctcttatgcagtttcccgtttccagtggggaaaaataacagatgcagaaccctca
agattcttaagtgaaattgatgatgagtatatagaattccttaatccggctatggaaaaa
agatttatcaataattctggagtaaaatccaatatttttgatgaacatccatctgaatta
aaatctttcaaaaaggtagagaaaaagacacttaatagaagtgaagataattcaaaacct
gctcaggaagtaagaaaattgaaaccggtaagcactgccaaaatcatcaatccaagtgga
gcttcctctcaggatattgaagtgggagataaagtgagacacgatcgtttcggcgttggg
gaagttactttcctggatgggacagatcctcagaatatcaaagcaaaagttgtattcatg
catgaaggagagaagaacctgattctgaaatatgctaaacttattaagatttaa
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