Chryseobacterium nakagawai: EG343_23145
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Entry
EG343_23145 CDS
T06300
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cnk
Chryseobacterium nakagawai
Brite
KEGG Orthology (KO) [BR:
cnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnk03032
]
EG343_23145 (gyrB)
03400 DNA repair and recombination proteins [BR:
cnk03400
]
EG343_23145 (gyrB)
Enzymes [BR:
cnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EG343_23145 (gyrB)
DNA replication proteins [BR:
cnk03032
]
Prokaryotic type
DNA Topoisomerases
EG343_23145 (gyrB)
DNA repair and recombination proteins [BR:
cnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EG343_23145 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AZA93294
UniProt:
A0AAD0YR62
LinkDB
All DBs
Position
5062252..5064186
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AA seq
644 aa
AA seq
DB search
MSQKQYTASSIQALEGMEHVRMRPSMYIGDVGLRGLHHLVYEVVDNSIDEALAGFCDTIF
VAIKEGNGIEVSDNGRGIPVDFHEKEQKSALEVVMTKIGAGGKFDKDSYKVSGGLHGVGV
SCVNALSNEMITTVYRDGNVYQQIYSKGKAQTGVEEIGNSDKRGTKQFFQPDDTIFTELV
YNYDTLASRLRELSYLNKGITITLTDEREKLEDGSFRSEIFHSEGGLKEFVAYIDGNRES
IMEHVIFMEGERDNIPVEVAMRYNTSFNENLHSYVNNINTHEGGTHLAGFRRALTRTLKK
YADELGLPAKEKVEITGDDFREGLTAVISVKVMEPQFEGQTKTKLGNSEVSGAVDKIVGE
MLTNFLEENPNEAKTIVQKVVLAAKARQAAKKAREMVQRKSPMGGSGLPGKLSDCSSKDP
AESEIFLVEGDSAGGTAKQGRDRHFQAILPLRGKILNVEKSMLHKVYDNEEIRNIYTALG
VSVGTEEDSKALNMVKLRYHKVVIMTDADIDGSHISTLILTFFFRYMKELIENGYIYIAQ
PPLYLLKKGNKKVYAYNEKEREEFTLEMSPDGKGVEVQRYKGLGEMNPEQLWETTLNPEH
RILKQVTIDNAVEADSVFSMLMGDEVPPRREFIEKNAKYAKIDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaacaatatacagctagtagtattcaggcattggaaggaatggagcacgta
cgtatgcgtccttcaatgtacattggtgatgtgggattaagaggtctccatcatttggtt
tatgaagtagtagataactctatcgacgaagcattggcaggattctgcgacacgatcttt
gttgccattaaagaaggtaacgggatcgaagtgagcgataacggtagaggtattccggtt
gacttccacgaaaaagaacaaaaatctgctcttgaggttgtaatgacaaaaattggagcc
ggaggtaagtttgataaagactcttacaaggtttcaggaggtcttcacggggttggagta
tcatgtgtgaatgcactttccaacgagatgatcactacggtttacagagatggaaacgtt
tatcagcagatctattccaaaggaaaagcacaaacaggtgttgaagaaattgggaatagt
gacaaaagaggaacaaaacagtttttccagccggatgatactatttttacagaattagtt
tataattatgatactttagcaagccgcttaagagaactttcttatcttaataagggaatt
acgattacccttaccgatgaaagagagaaattagaagacggttctttcagatcagaaatt
ttccattctgaaggaggattaaaggaattcgttgcttatatcgatggaaatcgtgaatct
attatggaacacgtgattttcatggaaggagaaagagataatattcctgtagaagtagca
atgcgttacaatacttccttcaatgagaaccttcactcatatgtaaataacatcaacact
catgaaggaggaactcacttagcaggtttcagacgtgctttaacgagaactttaaagaaa
tatgcagacgaattggggcttccggcaaaagaaaaagtagaaattacaggagatgacttc
cgtgaaggattaaccgctgtaatttctgtaaaagtaatggaacctcagtttgaaggacag
accaaaacgaaattaggaaattctgaagtttctggtgctgtagataaaattgtaggggaa
atgcttactaactttttggaagagaaccctaatgaagctaaaactattgttcaaaaagtg
gttctcgctgcaaaagcaagacaggcagctaagaaagctcgtgaaatggttcagagaaaa
tctccgatgggaggatctggactaccaggaaaactatctgactgttcatctaaagaccca
gctgaatctgaaatatttcttgtggagggagattccgcaggtggaacagcgaaacaagga
cgtgatagacacttccaggctattcttccactaagaggtaagattttgaatgtagaaaaa
tctatgcttcataaagtatatgataatgaagagatcaggaatatctatactgctcttgga
gtttctgtaggaacagaagaagatagcaaagcattaaatatggtaaagttaagataccat
aaagttgttattatgaccgatgctgatattgatggatctcacatctctaccctaattctt
actttcttcttcagatatatgaaggaacttattgagaatggatatatttatattgctcag
cctcctttatatctattgaaaaaaggaaacaaaaaagtatatgcttataacgagaaagag
cgtgaagagtttactttagaaatgtctccggatggaaaaggtgttgaagtacagcgttac
aaaggtcttggagaaatgaaccctgagcaactttgggaaacaactcttaaccctgaacac
agaatcctgaaacaggtgactattgataatgcagtggaagcagacagcgttttctcaatg
ttgatgggagatgaagttccaccaagaagagaatttatcgagaaaaatgcgaaatatgca
aaaattgatgcataa
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