KEGG   Chryseobacterium nakagawai: EG343_25295
Entry
EG343_25295       CDS       T06300                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cnk  Chryseobacterium nakagawai
Pathway
cnk03030  DNA replication
cnk03430  Mismatch repair
cnk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cnk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EG343_25295 (dnaX)
   03430 Mismatch repair
    EG343_25295 (dnaX)
   03440 Homologous recombination
    EG343_25295 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cnk03032]
    EG343_25295 (dnaX)
   03400 DNA repair and recombination proteins [BR:cnk03400]
    EG343_25295 (dnaX)
Enzymes [BR:cnk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EG343_25295 (dnaX)
DNA replication proteins [BR:cnk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EG343_25295 (dnaX)
DNA repair and recombination proteins [BR:cnk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EG343_25295 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid DNA_pol3_gamma3 AAA_22 RuvB_N AAA_30 AAA_14 AAA_5 AAA_16 Rad17 RCF1-5-like_lid AAA_7 nSTAND3 TIP49 AAA_24 AAA_18 ABC_tran DNA_pol3_delta_C AAA_19 RNA_helicase AAA_assoc_2 NTPase_1 AAA_2 RsgA_GTPase AAA_33 Sigma54_activ_2 SRP54 NPHP3_N TsaE DUF815 AAA_11 DEXQc_Suv3 T2SSE GNAT_acetyltr_2 AAA_28
Other DBs
NCBI-ProteinID: AZA93682
UniProt: A0AAD0YPH4
LinkDB
Position
5536997..5538082
AA seq 361 aa
MENFIVSARKYRPQEFDTVVGQSHITDTLEHAIEESQLAQALLFCGPRGVGKTTCARILA
RKINEKDGSVSEDGFAYNIYELDAASNNSVDDIRELIDQVRFAPQVGKYKVYIIDEVHML
SSAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIYDFKRIMIEDIQGHLRNIA
LKENIQYEDDALYLIAQKADGALRDALSIFDRLSTFSQRNITLAKAAEVLNILDYDQYLN
IVDLAKENKIPEVLSAFNDIVKKGFDPHIFVAGLGNHFRDLMMAQNASTIDLIEVGEKTK
SKFVEQGQKWAAQQLIDGIEICNHADINYKNSKNPRLTVEIALMQLASLTANSDVTKKKN
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaaaattttatagtatctgcaagaaaatatcgtcctcaggagtttgacacagtggta
ggacaatcccatattacggatactttagaacatgcaattgaagagagccaacttgctcag
gcattgcttttctgcggtcctcgtggtgtgggtaaaactacctgtgccaggattttagca
agaaaaataaacgagaaagacggctctgtttcagaagatggctttgcttataatatctat
gaattggatgcagcatccaataactctgtagatgatatcagggaactgatagaccaggta
cgctttgcacctcaggttggtaaatacaaagtatatatcattgatgaggttcatatgctg
tcttctgccgctttcaacgcttttcttaaaactttagaagaaccaccagctcatgccatt
ttcattttggcaactactgaaaagcataaaattattccaaccatcttatcccgttgtcag
atctatgattttaaaagaatcatgattgaagatattcagggacatttgagaaatatagct
ctgaaagaaaatattcaatatgaagatgatgcattatatctgattgcccaaaaagctgat
ggtgcattaagagatgctctttccattttcgataggctttctaccttttcccagagaaat
attacactggcaaaagcagcagaagtactgaacattctggactatgatcaatatcttaat
atagtggatctcgccaaggaaaataaaatacctgaagttctttccgcttttaatgatatt
gttaaaaaaggctttgatcctcatatctttgtagccggattaggaaatcacttcagagat
ttaatgatggctcaaaatgcttcaaccatagatcttattgaagtaggagagaaaacaaaa
tctaagtttgtggagcaaggacaaaaatgggcagctcaacagctgattgatggtattgag
atttgcaaccatgcagatattaattataagaactccaagaacccaagattaactgttgag
attgcattaatgcaattggcttcgctgactgctaattcagacgttactaaaaaaaaaaat
tcctga

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