Chionomys nivalis (European snow vole): 130861825
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Entry
130861825 CDS
T11437
Symbol
Jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
130861825 (Jmjd1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnl03036
]
130861825 (Jmjd1c)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130861825 (Jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
130861825
NCBI-ProteinID:
XP_057607029
LinkDB
All DBs
Position
19:46712548..46876529
Genome browser
AA seq
2529 aa
AA seq
DB search
MAVETRPELVGKRFLCVAAGEDARPERGQSGCGSGWRAGVIRAVSHRDSGHPDLAVYVEF
DDLEWDKREWVKVYEDFSTFLVEYHLIWAKRNDPSQTQGSKSRQIQWPALTFKPLVENSI
PSSITAVEFLIDKQLDFLTEDSAFQPYQDDIDSLKPVLRDNPQLHAEVKVWVKEQKVQEI
FMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMT
FLDDVVHSLLKGENIGITSRRRSRATHNTNTVHGHYTRAQANSPRPAMNSQAAVPKQNTH
QQQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYISRGENPKGKNKHVVSKRRKPEEEEKR
ANTKRFRTDNASDVSESSDSENSNKRVSENSSEHTPELKTKVTSKVNGAEGKSQIVEKTG
GEILMDTQPPWDQVQEHKTREEGEKLKSMDSHIQEKMTLRSSEQATVADHNPNDSVLQEC
SVENTHTVELLPKEKLVSRTPTPKCAVEIKNDTHPERMAQENSNTFGLQTLENMDPNVID
SKHSNTKYLETAKQDSDQSWVSDIVKVDLTQSSVINTSSGNDHRGVDKERNQYVSYMSSL
STVSVTEDQLHKRSPPPETIKSKLTTSVDTQKTKSNSSPEVVKSKITTHSPDSIKSKAPY
MNSQAIGERRLASKIEHELSRCTFHPVPTRSGALETTKSPLIIDKNEHFTVYRDPALIGS
ETGTNHISPFLSQHHFPLPSSSHRTCLNPGTHHPALTPGSHLLAGSSSQTPLPTLNTHPL
TSGPHHSVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLALAHQQQQQLLQHQSP
HLLGQAHPSASYNQLGLYPIIWQYPNGAHAYSGLGLPSSKWVHPENAVNTEASLRRNSPS
PWLHQPTPVTSTDGIGLLSHIPVRPSSAEPHRPHKMTVHSSSPVAKTLVDHHKEELERKA
FMEPLRCNASPSVKSDLDLNRSQGGKDCHLHRHFVGPRPPQETGERLNKYKEEHRRILQE
SIDVAPFTTKIKGPEVERENYSRVAPSSSSPKSHAIKQDKDVERSVSELYKMKHSVPQSL
PQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQNNLSAAANPQSLSFIPSLSKPPPLIK
HQPESETLVSKIPDHLPHQIASHSVTTFRSDCRSPTHLTVSSTNALRSMPALHRAPVFHP
PIHHSLERKESSYSSLSPPTLTPVMPVNAGTKVLESQKPPTLIPEPKDSQANFKSSSDQN
LTEMWKSNNNLSKEKAEWPVEKSSGKSQAAVASVIVRPPSSTKVDGVPSIPLASKDRVCE
RSSSGASKTDYLKPESGETGRVILPNVNLENAHVKSEKNVESVSQGSVPISVMSAVNVVC
NTKTDVFTSAATTTSVSSLGGSETVYSLSNTILASTSLECTSSKSVTQAVAQTKECKVST
PGPVTVACSKTGSGSGGQLSSGFSGTTDFIHLKKHKAALAAAQYKNSNVSEAELNTVRNQ
TATASFPLDSTMICGASNKAISVGNGPAAQTSQPNYHTKLKKAWLTRHSEEDKNTNKIEN
SGNSVSEIIKPCSVNLIASTSNDIQNSVDSRVTGDKYGRDDKASRRKTKRTYESGSESGD
SDESESKSEQRTKRQPKPTYKKKQNDLQRRKGEIEEDLKPNGVLSRSAKEKSKLKLQSSN
SAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEESTHSPV
FCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDEIDVETSKYILDMIG
DKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNVHWVCRKCGFVACLD
CYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHVLREKYGIK
SHCHCTNKQNNQVGNFPTINGVSQVLQNVLNHSNKSSLCMPESQQQTTPQKSQSNGDSSP
GSVSTDSRLTPPESQSPLHWLADLAEQKAREEKQENNEFGLEKEIKEEGEQDASDSPNDS
ASPPASQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGASSGKSGRTMPNILDD
IIASVVENKIPPNKTAKINVKSEPNEEPKESRKSAMNESNKLYSDIPHSWICDQHIIWLK
DYKNSNNWKLFKECWKQGQPAVVSGVHKKMNMSLWKAESISLDFGDHQADLLNCKDSIIS
NANVKEFWDGFEDISKRQKNKSGETVVLKLKDCPSGEDFKTMMPARYEDFLRSLPLPEYC
NPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEASDVVNILVYVGV
AKGNGVLSKAGILKKFEEEELDDVLRKRLKDSSELPGALWHIYAGKDLDKIREFLQKISK
EQGLEVLPEHDPIRDQSWYVNRKLRQRLLEEHGVRACTLIQFLGDAIVLPAGTLHQVQNF
HSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRTLKMHE
DEVEDMEDT
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcgtggcggccggc
gaggacgcgcgtcccgagcgcgggcagagcggctgcgggagcggctggcgggccggggtc
atccgagccgtgtcccaccgcgacagcggccacccggacctggcggtgtatgtggaattt
gatgaccttgaatgggataaacgggagtgggttaaagtttatgaagatttttcaactttc
ttggtggaataccacttaatctgggccaaaagaaacgaccctagccagactcagggatca
aagagcagacaaattcagtggcctgcactgaccttcaaaccattggttgaaaatagtata
cctagttcgattactgcagtagaatttcttatagataagcaactggattttttaacagaa
gatagtgcctttcagccataccaggacgacattgacagcctaaagcctgtactcagggac
aacccacagctgcatgcagaagtgaaagtctgggtgaaggaacagaaggttcaggagatt
tttatgcaaggtccttattctttaaatggatacagagtgagagtatatagacaagattct
gccacccagtggtttactggcataattactcatcatgatctcttcacccgcaccatgatc
gttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgacc
tttctagatgatgtcgttcactctttgttaaaaggtgaaaatattggcattacatcacga
cgcaggtctcgtgccactcataataccaacactgttcacggtcattatacacgtgctcaa
gcaaatagtcccagaccagcaatgaactctcaagctgctgtaccaaaacagaacacacac
cagcaacagcaacaaagaaatattcgtccaaataagagaaagggctcagatagcagtata
cctgatgaagagaagatgaaggaagaaaaatatgattatatatcacgaggagaaaatcct
aaaggtaaaaacaaacacgtggtgagtaaaagaaggaagcccgaggaggaggagaagaga
gctaacacgaagaggtttcggactgacaatgcttcagatgtttctgagagcagtgactca
gaaaattcaaataagagagtaagtgagaattcctctgagcacacaccagagctgaaaact
aaagtcacctcaaaggtaaatggagcagagggaaaatcccagattgttgagaagacagga
ggagagatcttaatggacactcagcctccctgggatcaggtacaagaacataaaacccgt
gaagaaggggagaagctgaagtccatggacagccacattcaagaaaaaatgactctccgt
tcatcagagcaggccacagttgctgaccataatcctaatgattcagttcttcaagaatgc
agtgtggaaaacacacacacagtggaattattaccaaaggaaaagttagtatccagaaca
ccgacacccaaatgtgctgtggaaatcaaaaatgacacccatccagagaggatggctcag
gagaactcaaatacgtttggcctccagacacttgagaacatggatcctaatgtcattgat
tctaaacattctaatactaaatacctagaaacagcaaagcaagattctgaccaaagctgg
gtcagtgatatagtgaaagtggatttaactcaatcaagtgttataaatacttcttcagga
aatgatcaccgaggtgtggataaagagagaaatcaatatgtctcttacatgtcttcatta
agtacagtttctgtcacagaggatcagctacataagagaagtccacccccagaaactata
aaatctaaactaactacttcagtagatactcagaagacaaaatccaattcttctcctgaa
gttgttaaatccaagattactactcattctcctgattctataaagtctaaggctccttac
atgaatagtcaagctattggtgagagaaggctggcaagtaaaatagaacatgagttatcc
agatgtacttttcacccagttcctactcgaagtggtgccctggaaactacgaagagccct
ctaatcattgacaaaaacgagcacttcacagtttatagagatcctgctcttattggatca
gaaacaggaactaatcacatttcaccatttttgagccagcatcatttccctcttccttca
tcatcccatagaacctgtttaaacccaggtacccatcaccctgccttaacaccaggatcc
cacttactagctgggtcatctagtcaaactccattacctacccttaacactcaccctctc
actagtggtccgcaccattctgtccatcaccctcatttacttcccactgtgttacctgga
gtgcctactgcctccttacttggtggccacccacgcctagagagtgcgcatgccagcagc
ttgagccatttagcgctagcacaccagcagcagcaacagttgttacaacaccagtcacct
catcttctcggacaagcccatccttcagcttcatataatcagcttggactttatccaatt
atttggcaatatccaaatggagcacatgcatactcaggacttggtctaccttcttctaag
tgggttcacccagaaaatgcagttaatactgaagcttcattaaggaggaattctcccagt
ccttggttacatcaacctactcctgtgacctcaacagatggtattggattacttagtcac
attcctgtcagaccttctagtgcagagcctcatcgacctcataaaatgacagtgcattcc
agttcaccagtggcaaaaaccttagtagatcaccacaaagaagaattagagaggaaagct
ttcatggaaccattacggtgtaatgcatccccatcagtgaaaagtgacctggatcttaat
aggtcacagggaggaaaggattgtcacttgcataggcattttgtgggtccgaggccacct
caggagactggagagagactgaacaaatacaaggaggaacatcgtcggattcttcaagag
agtattgatgttgccccttttacaaccaaaatcaaggggcctgaggttgaaagagagaat
tactccagggtagcaccatcatcttctagtcctaaaagccatgccatcaaacaagataaa
gatgtggaacgctcagtatcagagctttataagatgaagcactcagtgcctcagagtttg
ccccaaagtaactatttcactacattatctaatagtgtggtcaatgagccaccaaggtcc
tacccgtccaaagaagtttcaaatatttacactgaaaaacaaaataacctttctgcagca
gccaatccgcagtctctttcatttataccatctctttcaaagcctccacctttgattaaa
caccaaccagaaagtgaaactttagtaagcaagataccagaccatcttccccatcagatt
gcatctcactcagtaacaacattcagaagtgattgtagaagtcccacccatttgactgtc
tcttctacaaatgcacttcgcagtatgcctgctttgcatagggcaccagtgttccaccca
ccaatccatcacagtttagaaagaaaggaaagtagctacagtagcctttcccctccaact
ctgaccccagtgatgccggtaaacgctggcaccaaagtcctagaatcccagaagcctcca
actctaattcctgagccaaaagactcccaagcaaattttaagagttcttctgatcagaat
ttaacagaaatgtggaagtctaacaacaacctcagcaaggagaaggctgagtggcctgtg
gaaaaaagcagtggaaagtcacaggctgccgtggcatctgtcattgtccgtccaccatct
agtacaaaagttgatggtgttccatcaataccattagcttccaaagatagagtttgtgaa
agatcttcatctggggcaagtaaaacagattacctcaaaccagaatccggagagactgga
agagtcattctgccaaatgtgaatttagaaaatgctcatgtgaaatctgaaaaaaatgtt
gagtctgtctcccagggcagtgttcctatttcagtcatgtctgctgtaaatgtggtctgt
aataccaaaacagatgtattcacatctgctgccactaccaccagtgtttccagcttgggt
ggttcagaaacagtttattctttatcaaataccattttggcctctacatccttagaatgt
acttcttcaaaaagtgttactcaagcagtggcccaaacaaaggaatgcaaagtcagcacc
ccggggccagtcactgtggcctgtagtaagacagggagtggtagtggtggtcagcttagc
tctggcttctcaggcacaactgattttattcatttaaaaaagcacaaggcagcattggct
gcagctcagtataaaaatagtaatgtcagtgaggctgaacttaatactgtgagaaatcag
acagcaacagcctcttttcccctggatagcaccatgatttgtggtgcaagtaacaaagca
atctctgtaggaaatgggccagcagcccagaccagtcagcccaactaccacactaaactg
aagaaggcctggctcaccagacattcagaagaagataaaaatactaacaaaatagaaaat
tcagggaattctgtatcagaaattattaagccatgttctgtcaatttaatagcttctaca
tctaatgatatacaaaatagtgtagatagcagagtcacaggagataagtatggaagagat
gataaagccagcaggagaaaaaccaaaagaacttacgaatctggctctgaaagtggagac
tcagatgaaagcgagagcaagtcggagcaaaggactaaacggcagcctaagccaacttat
aaaaagaagcagaacgacctgcagagaaggaaaggcgagattgaagaagacctgaaaccg
aatggcgttctcagcaggagtgccaaggagaaaagtaagctgaagttgcagagcagtaat
agtgctggtattcctcgttcagtgctgaaagactggcgaaaagtcaaaaagctgaagcaa
actggagaatcctttttgcaagatgactcttgctgtgagatagggcccaatttacaaaag
tgccgagaatgtagacttattcgtagtaaaaaaggagaagaatcaactcactcaccagta
ttttgtagattttactactttagaagattgtcatttagtaagaatggagtggtcaggata
gatggtttctcttctcctgaccaatatgatgatgaagctatgagtttgtggacacatgaa
aattatgaagatgatgaaatagatgttgaaacctctaaatatatcttggatatgataggt
gataagttctgtcaattagtaacatctgagaaaacagctttgtcctgggtgaaaaaggat
gccaaaattgcctggaaaagagcagtgcgaggtgtccgggagatgtgtgacgcgtgtgaa
gcgacactgtttaatgtccactgggtctgtcgcaagtgtgggttcgtggcttgcttggat
tgttacaaggccaaggaaaggaagagttctagagataaagagttgtatgcttggatgaag
tgtgtgaaaggacagcctcacgatcataaacatttaatgccaactcaaattatacctggt
tctgtgttgacagatcttcttgatgccatgcacgtacttagggaaaaatatggcattaaa
tcccattgtcactgtactaacaaacagaacaatcaagttggaaattttcctacaataaat
ggtgtgtctcaagttttacagaatgttcttaaccacagtaataaaagttctctgtgcatg
cccgagtctcagcagcagaccactccccagaaatctcagagtaatggcgatagcagccct
ggaagtgtaagcacagacagcaggttgacccctccagagtcccagtcaccgctgcactgg
ctagctgatcttgctgaacaaaaagccagagaggaaaaacaagaaaacaacgaatttggt
cttgaaaaggaaattaaagaagagggagaacaagatgcctctgactctccaaatgacagt
gcatcacctccagcttcccagaacaacgaacagggttcaaccttgcgtgatttgctgact
actacagctggcaagcttcgagtgggctccacagacgctggcattgcctttgctccagtg
tattcaatgggagcctcaagtggcaaaagtggacggactatgcctaacattcttgatgac
atcattgcttcagttgttgaaaacaaaattccaccaaataaaaccgccaagataaatgta
aaatcagagcctaatgaagaacctaaagaaagccgaaaatctgccatgaatgaaagcaat
aaattatatagtgatataccacattcttggatctgtgaccagcatattatatggctcaag
gattataagaatagtaataactggaaacttttcaaagagtgttggaaacaaggacagcct
gcagtggtttccggtgtgcataagaaaatgaacatgagcttgtggaaggcagagtcaatt
agtctggattttggagaccaccaagccgatctcctgaactgcaaagacagcattatttca
aatgccaacgttaaggagttctgggatggttttgaggacatttcaaaacggcagaaaaac
aaaagtggagaaacggttgttttaaaattgaaagactgcccatctggagaagacttcaag
accatgatgccagcaagatacgaagactttttgagaagtctgccattaccagaatattgc
aacccagaagggaagttcaatttggcctcccatttgccagggttttttgtgcgccctgat
ctaggacccaggttgtgcagtgcctatggtgttgctgctgctaaggatcatgatatagga
accacaaatctccatgttgaagcttctgatgttgtaaatattctggtctatgttggtgta
gcaaaaggaaatggtgtcctctcaaaagcaggaatacttaagaaattcgaagaagaagaa
ttggatgacgttttaaggaaaagattaaaggattcgagtgaactgcctggtgctctgtgg
catatttatgctggaaaagatcttgacaagataagggaatttcttcaaaagatttcaaaa
gaacaaggccttgaagttctgcccgagcatgatccaatccgggaccaaagctggtatgtg
aatagaaagctccgccagaggctgcttgaggagcatggtgtgagagcctgcactctgatt
cagtttcttggtgatgccatcgttttgccagcaggaacacttcatcaggtacagaatttt
cacagctgtattcaggtaactgaagactttgtctccccagaacatcttgtacagtcattt
catttaacgcaggaactgaggcttttgaaagaggaaatcaattatgatgataaactacag
gttaagaatatcttatatcatgcagtcaaagaaatggtgagaactttgaagatgcatgaa
gatgaagtagaggatatggaggacacttaa
DBGET
integrated database retrieval system
