Chionomys nivalis (European snow vole): 130862003
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Entry
130862003 CDS
T11437
Symbol
Pex6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130862003 (Pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130862003 (Pex6)
Membrane trafficking [BR:
cnl04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
130862003 (Pex6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_16
AAA_33
AAA_22
AAA_11
RuvB_N
AAA_lid_3
nSTAND3
NACHT
NPHP3_N
AAA_5
TsaE
TIP49
AAA_25
nSTAND_NTPase5
AAA_19
RNA_helicase
AAA_17
AAA_30
AAA_28
Mg_chelatase
AAA_14
Vps4_C
PEX6_4th
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
130862003
NCBI-ProteinID:
XP_057607354
LinkDB
All DBs
Position
19:complement(11374080..11386643)
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AA seq
980 aa
AA seq
DB search
MALAVLRVLDPFPTETPPLSVLLPPGGPWSATGLGLVLALRPASESPAGPALLVAALEAP
GPQNEQRGPGPPQLLVSRALLRLLALGPGARVRARPVRRPPALGWALLGTSPGPGLGPRV
GPLLVRRGEILPVPGSRVLETRPALQGLLGPGTRLAVTELRGRAKLGPESSDHSHPPPPP
VVSSFAVSHAVRQLKGVLGGTEDALGVSRSCLRGLGLFQGEWVWVARVGEIPDSSQSHLA
KVQVVEPRWDLSERLGPSSGQLGEPLADRLVFVPPTLAFNLGCDPLEVGELRIQRYSEGS
NSPEDRGSCSLLAEPPFARELHIEIVSSPHYSASGNYDRVLYRHFRTPRVVQEGDVLCVP
TAGQVETLEGRLEKLPRWPEVFFKVKKTVGEAPDGPASAFLADTTHTSLYMAGSTLSRVP
LLPSGRSTPWDSLSPPGLEALVKELCTVLKPRLQPGGTLLTGASCVLLRGPPGSGKTTAV
TAACNRLGLHLLKVPCCSLCADSSGAVETKLQAAFSRARRCRPAVLLLTAVDLLGRDRDG
LDEDARVVATLRHLLLDEDPPNSCPPLMVVATTSRAQDLPTDVHTAFPHELEVPVLSEEQ
RLSVLQTLTGHLPLGQEVNLLQLARRCAGFVVGDLYALLTHTSRVACARIRASGLAGGLS
EEDEGELCAAGFPLRAEDFGQALDQLQTAHSQAVGAPTIPSVSWHDVGGLQDVKKEILET
IQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQ
SEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTG
DVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLAS
VLDCCPPQLTGADLYALCSDAMTAALKRRVRDLEEGLELGSSALLLTMEDLLQAAARLQP
SVSEQELLRYKRIQRKFAAC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgctagctgtcttacgcgtcctggatcccttcccgactgagacgccaccgttgtcg
gtgctgttgccgcccgggggcccgtggtctgcgacagggctgggcctggtgctggcgttg
cggccggcgagcgaaagtcctgcggggcccgcgctgctcgttgcggccctggaagctccg
ggcccccagaacgagcagcgcgggcccgggcctccgcagctgctggtgagccgcgcattg
ctgcggcttctggcgctaggccccggggcgcgagtacgagcgcggcctgtgcggcggcct
ccggcgctaggctgggcgctgctcggcacgtctcccgggcctgggcttgggcctcgggtc
ggaccgctgctggtgcgccgcggggagatcctgcccgtgcccggttcgcgagtgctggag
acgcggccggccttgcaagggctgctgggcccagggacgcggctggcagtaactgagctc
cgcgggcgggccaaactgggccctgagagcagtgaccacagccatcccccacccccgccc
gtggtatcctcctttgccgtttcccacgcggtccggcaacttaaaggagttttgggaggg
actgaagacgcactgggtgtgagccgaagctgtctccggggtctcgggctcttccagggc
gagtgggtatgggtggcccgggtcggagagataccagactcttcccagtcgcacttggct
aaagtacaggtcgtagaacctcgctgggacctgtccgagagactgggacccagctctggg
cagctgggagagccacttgctgaccgactggtgtttgtgccgcctactctggcttttaat
ctcggctgtgaccccctggaagtgggagagctcagaattcagagatactcggaaggctcc
aacagccctgaagacagaggaagctgttcactgctggctgagcctccgtttgctagagag
ttacacattgaaattgtgtcctcacctcactacagcgctagtgggaactatgaccgcgtt
ctttaccggcactttcgcacacccagggtggtccaggaaggggatgttctgtgtgtacca
acagctgggcaagtggagactctggaaggacgcctggagaaactgcccaggtggccagag
gtgttttttaaagtgaagaaaacagttggggaagccccagatggaccagccagtgccttc
ctggcggataccacccacacctctttatacatggcaggttctaccctgagtcgtgttcca
ctgctgccttcgggaaggtccactccctgggacagcttgtctcctccaggcctagaagcc
ctggtgaaggagctttgtactgtcctgaagcctcgcctgcagcctggaggaaccttgctc
acaggagccagctgtgtgcttcttcggggccccccaggcagtggaaagaccacagcagtc
acggctgcatgtaatcgccttgggctccatttactgaaggtgccctgctgcagcctctgt
gcagacagtagtggggctgtggagacaaagctgcaggctgccttctcccgggcccgccgc
tgcaggcctgccgtcctgttgctgacagccgtggaccttctgggccgggaccgtgacggg
ctggacgaggatgcccgcgtggtggccacactgcgtcacctcctccttgatgaggaccct
cccaacagttgtcctcctctgatggtggtggccaccacaagccgtgcacaggacctgccc
acggatgtgcacacagcatttccccatgagctggaggtgccagtgctgtccgaggagcag
cggctcagtgtcctgcagaccctcactggccaccttcccttgggccaggaggtgaacctg
ctgcagctggcgcggcgctgtgcgggctttgtggtaggggacctctatgcccttctgacc
cacaccagccgggtagcctgcgccaggatcagagcctcaggtttggcaggtggcctgagt
gaggaggatgagggggagctgtgtgccgctggttttcccctgcgtgctgaggactttggg
caggccttagaccaactgcaaactgctcactcccaagctgtgggcgcacccacgatccct
tcggtgtcctggcacgatgtgggtgggctgcaggatgtgaagaaggagatcctggaaacc
atccagctccctctggaacaccctgagctgttaagcctgggcctgaggcgatcgggcctt
ctgctgcatgggcctccgggcacaggcaagaccctcctggccaaggcagtggccacagag
tgcagcctcaccttcctcagtgtgaagggaccagagctcatcaacatgtatgtgggccaa
agtgaggagaatgtgcgggaagtgtttgccagggccagggccgccgctccatgcatcatc
ttctttgatgaactggactccttagctccaagccgggggcgcagcggagattctggaggt
gtgatggacagagtggtgtctcagctcttggctgagctggacggacttcacagtactggg
gacgtgtttgtgatcggagccaccaacagaccggacctcttggatcccgcccttctgcgg
cctggcagattcgacaagctggtgtttgtaggggcaagtgaggaccgcgcttcccagctg
cgtgttctgagtgccatcacacgcaagttcaagctggaggcctctgtgagcctggcgagt
gtgcttgactgctgcccgccccagctgacgggtgcagacctctatgccctctgctccgat
gccatgacagctgccctcaaacgcagggttcgagacctagaggaagggctagagctgggg
agttcagcactgctgctcaccatggaggacctgttgcaggccgcagccaggctgcagccc
tcagtcagtgagcaggagctgctccggtacaagcgcatccagcgcaagtttgcggcctgc
tag
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integrated database retrieval system
