Chionomys nivalis (European snow vole): 130862193
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Entry
130862193 CDS
T11437
Symbol
Tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130862193 (Tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130862193 (Tgfbrap1)
Membrane trafficking [BR:
cnl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130862193 (Tgfbrap1)
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GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
VPS3_N
Motif
Other DBs
NCBI-GeneID:
130862193
NCBI-ProteinID:
XP_057607658
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Position
19:complement(37276380..37320165)
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AA seq
860 aa
AA seq
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MMNIKAFTLVSAVERELLTGDREHISIECVECCGRNLYVGTNDCFIYHFLLEEKTLPTGT
ASFIATKQLHRHLGFKKPVNELCAASALNRLLVLCDNSITLVNMLNLEPVPSGARIKGAT
TFAVNENPVNGDPFCVEVCIISVKRRTVQMFLVYEDRVQIVKEVSTPEQPLAVAVDGYFL
CLALTTQYIILNYSTGLSQDLFPYCSEEKPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASRRVEEALILAKGARRNIPKDKFQVMYRRVLQQAGFIQ
FAQLQFLEAKELFRSSQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
MTKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA
AWLEKHKKYFALGLLYHYNKQDASAVQLWVKIVNGDVQDSTRSDLYEYIVDFLTYCLDQE
LVWTHADWLLQKSEEIGVQVFTKRPLDEKQQTGFNPDDIISCLKKYPKALVKYLEHLVID
RRLQKEEYHTHLAILYLEEVLRQRVATGGKDVDTTEAQTKLRRLLQKSDSYRVHLLKEKI
QGAGLPMESAILHGKLGEHEKALHILVHEMGDFSAAEDYCLWGSEGQDAACRQHLFHTLL
AMYLHAGPSAHALTVAAVDLLNHHAREFDATQVLQLLPDTWSVQLLCPFLTGAMRDSIHA
RRTTQVALGLARSENLIYMYDKVKLKGSAVWLSDKKLCQLCQNPFGEPVFVRYPNGGLVH
THCAASRHTTPSSPSPGSRT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacatcaaggccttcaccttggtctctgcagtagagcgggagctgctgacgggt
gacagagagcacatcagcattgagtgtgtggagtgctgtggcaggaatctctatgtcggc
accaatgactgcttcatctaccacttcctgctggaggagaagactttgcctacagggacg
gcctcattcattgccaccaaacagctacacagacacctgggcttcaagaagcctgtgaat
gagttgtgtgcggcctcagctctcaataggctgctggtgctctgtgacaactcgataacc
ctggttaacatgctgaacctggagccagtgccctcaggggcccgcatcaaaggggccaca
acatttgcagtgaacgagaaccctgtgaatggggaccccttctgcgtggaagtgtgcatc
atctcggtgaagcgaaggaccgtccaaatgtttctggtgtacgaggaccgagtacagatt
gtcaaggaggtgtccactccagagcagcctcttgctgtggctgtggatggctacttcttg
tgcctggccctgaccacacaatacatcatcctgaactacagcacaggcctttcccaggac
ctgtttccctactgcagcgaggagaagccacccattgtcaagaggataggcagacaggag
ttcctgctggctggccctggaggcctgggcatgtttgccaccgtggctgggatttcccag
cgtgcccctgtgcactggtcagagaatgtgattggggcagctgtttgcttcccctatgtc
atagcactcgatgacgaattcatcacggttcacagcatgctggatcagcagcagaaacag
accctgccctttaaagaaggccacatcctgcaggactttgaaggaagagtgattgttgcc
acaagtaaaggagtttacatcttggttccattacctctggaaaaacaaatacaggatctg
ttagcaagccgaagagtggaggaggctttgattttagcaaaaggagcccggaggaacatt
ccaaaagacaaatttcaggtgatgtacaggagggttctgcagcaggcaggctttatacag
tttgcacagctccagttcctggaagccaaagagctcttcagaagcagccagctggatgtc
cgggagctgatctctctctaccccttcctgttgcccacctcctcttccttcacccggtct
caccctcctcttcatgagtatgcagacctgaaccagctgacccagggtgaccaggagaag
atgaccaagtgcaagcgcttcctcatgagctacctgaatgaagttcgcagcacagaggta
gcaaatggctacaaggaagacatcgacacggccctactcaagctgtatgcagaggctgac
catgacagcctgctggacctcttggtcactgagaacttctgcctgctgacggacagtgct
gcctggctggagaagcacaaaaagtattttgccctaggactgctctatcattacaataaa
caggatgcctctgcggttcagttgtgggtgaagattgtgaacggggacgtccaggattcc
acacgctcagacctgtatgaatacatcgttgattttcttacctactgcttagaccaagag
ctcgtgtggacccatgctgactggctgttgcagaaaagtgaggagattggagttcaagtt
ttcaccaagagacctttggacgagaagcagcagactggttttaatccagatgacattatc
agttgccttaagaaataccctaaagccctggttaaatatctggagcatcttgttatcgac
aggagactgcagaaagaagagtaccacacccacctggccatcctctacctggaggaagtg
ctgcggcagagggtggccactggcggcaaggatgtagacaccactgaggcgcagaccaaa
ctccggaggctgctccagaagtctgactcctaccgcgtccacttgttgaaagagaagatc
cagggtgctggcctgcccatggaaagcgccatcctccacgggaagctgggcgagcacgag
aaagccctgcatatcctggtgcacgagatgggggacttctctgcagctgaggactactgc
ctctggggctccgagggtcaggacgcagcctgccgtcagcaccttttccacacactgctc
gccatgtacctccatgcgggcccctctgcccatgcgctgactgtggccgctgtggacttg
ctgaaccatcacgccagggagtttgatgccacccaggtcttgcagctgctgcctgacacc
tggtcggtgcagcttctctgcccgttcctcacaggagctatgagggacagcatccatgcc
aggaggaccacacaggtggctcttggcttggccagatcagaaaacctgatttacatgtat
gataaggtgaagctgaagggaagtgcagtctggctctcagacaaaaagctctgccaactc
tgccagaacccttttggtgagcctgtgtttgtcagatacccaaatggagggctcgtgcac
acccactgtgctgccagcagacacacgacccccagctcacccagccctggctctcggact
tga
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