Chionomys nivalis (European snow vole): 130862592
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Entry
130862592 CDS
T11437
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl00310
Lysine degradation
cnl00514
Other types of O-glycan biosynthesis
cnl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130862592 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130862592 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cnl01003
]
130862592 (Colgalt1)
Enzymes [BR:
cnl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
130862592 (Colgalt1)
Glycosyltransferases [BR:
cnl01003
]
O-Glycan biosynthesis
O-linked Gal type
130862592 (Colgalt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
130862592
NCBI-ProteinID:
XP_057608272
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All DBs
Position
20:5682820..5701629
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AA seq
618 aa
AA seq
DB search
MAAFPGGLHGLRFLPLLLLLPLPPGGPRGTDGYFPEERWSPESPLQAPRVLIALLARNAA
PALPATLGALERLRHPRERTALWVATDHNSDNTSAILREWLVAVKGLYHSVEWRPAEEPS
SYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYIMFVDSDNLITNPDTLSLLIAEN
KTVVAPMLDSRAAYSNFWCGVTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRK
AASRSLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRAHSSLQDE
AESFMHVQLEVMVKHPPVQLSRFISAPSKTADKMGFDEVFMINLKRRRDRRERMLQALHE
QEIDCKLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIWREVV
DRGLQKSLVFEDDLRFEIFFKRRLMNLMQDVEREGLDWDLIYVGRKRMQVEQPEKAVPRV
RNLVEADYSYWTLAYVISLQGARKLLGAKPLAKMLPVDEFLPVMFDKHPVSEYKTHFSPR
DLRAFSVEPLLVYPTHYTGDDGYVSDTETSVVWNNEQVKTDWDRAKSQKMREQQALSREA
KNSDVLQSPLDSAARDEL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttccccggcgggttgcacgggctgagattcctgccgctgctcctgctgctg
ccactgccgccgggtggcccgcggggcaccgacggctacttccccgaggagcgctggagc
cccgagtccccgctgcaggcgccgcgcgtcctcatcgcgctgctggcgcggaacgcggcg
cccgcgctgccggccacgctgggcgccctggagcggctgcgccacccacgggagcgcacg
gcgttatgggtggccacggatcacaactcggacaacacttcagccatactccgagagtgg
ctggtggctgtgaagggtttgtaccactctgtggagtggcgaccagcggaggagcccagt
tcctatccagatgaagagggccccaaacactggtctgactcccgctacgaacatgtcatg
aagttgcgccaggcggctctcaagtcggctcgggatatgtgggctgattacatcatgttt
gtggacagtgacaacttgatcaccaaccctgacaccctgagtctcctcattgctgagaac
aagacagtggtggccccaatgctggattcccgtgcagcgtactccaacttctggtgtggg
gtgacttcgcagggctactacaagcgcacccctgcctacatccccatccggaagcgagac
cgcagaggctgcttcgccgttcccatggtgcactccacctttctcatcgacctgcggaag
gcggcgtccaggagcctggccttctatccgccgcaccctgactacacctggtcttttgac
gacatcattgtctttgccttctcctgcaagcaggcagaggtgcagatgtacgtgtgcaat
aaggaggtgtacggcttcctgcccgtgcctctgcgtgcgcatagcagcctgcaggacgag
gcagagagcttcatgcacgtgcagctggaggtcatggtgaagcacccgccagtgcagctg
tcccggttcatctcagcacccagcaagactgcagacaagatgggctttgacgaggtcttc
atgatcaacctgaagcggaggcgggaccggcgagaacgcatgctgcaggccctgcatgag
caagagatcgactgcaagctggtggaggccgtggatggcaaagccatgaacaccagccag
gtggaggccctgggcatccagatgctgcctggctaccgggacccctaccatgggcgaccc
ctcaccaagggagaactgggctgcttcctcagccactacaacatctggagggaggtggtt
gaccggggactgcagaaatccctggtgtttgaggatgatctgcgttttgagatcttcttc
aagagacgcctgatgaacctcatgcaggatgtggagcgcgagggtttggactgggacctc
atatatgtgggccggaagcgcatgcaggtggaacagccggaaaaggccgtgccccgtgtg
aggaacctggtggaggccgattactcctactggacgctcgcctatgtgatctccctgcag
ggtgctcgcaaacttcttggagccaagccgctggccaaaatgctgccggttgacgagttc
ctgcccgtcatgtttgacaagcacccagtgtcagaatataagactcacttctctccgcgc
gacctgcgtgccttctccgtggagccgctccttgtctaccctacacactacacgggggac
gacggttacgtgagcgacacggagacctcagttgtgtggaataacgagcaggttaagact
gactgggaccgagccaagtctcagaagatgcgagagcagcaggcgctaagccgcgaggcc
aagaactctgacgtgctgcaatccccgctggacagcgccgctcgggacgaactctga
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