Chionomys nivalis (European snow vole): 130862762
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Entry
130862762 CDS
T11437
Symbol
Vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130862762 (Vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130862762 (Vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnl04147
]
130862762 (Vps36)
Membrane trafficking [BR:
cnl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130862762 (Vps36)
Exosome [BR:
cnl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130862762 (Vps36)
Exosomal proteins of colorectal cancer cells
130862762 (Vps36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
BBL5
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
130862762
NCBI-ProteinID:
XP_057608547
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All DBs
Position
20:complement(49976920..50001986)
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AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRVYDGEEKIKFDAGTLLLSTHRLIWRDQKNNECCMA
IPLSQVVFIEEQAAGIGKSAKIVVHLHPAPSNKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENVPVSQSLQTNKGPQPGRVRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKEKQGDVTEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLP
VRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagatcaacgagacgctggtgatccag
cagcgcggggtgcgcgtctacgacggcgaggagaagataaaattcgatgctgggacactt
cttcttagtacacaccggctgatttggagagaccagaaaaacaatgagtgctgcatggcc
attcctctgtcccaggttgtgttcatcgaggaacaggcggccggaattgggaagagtgcc
aaaatcgtggttcatctgcacccggctccttctaacaaagagcccggtccattccagagc
agtaaaaactcctacatcaaactctccttcaaagagcatggccagatcgagttttatagg
cgtttatcagaggaaatgacacagagaaggtgggagaatgtgccagtttcccagtcattg
caaacaaataaaggaccccagccaggaagagtaagagctgtagggattgtgggtattgaa
aggaaactcgaagaaaaaagaaaagaaaccgacaaaaacatttctgaggcctttgaagac
cttagcaagctaatgatcaaggctaaggaaatggtggagttatcaaaatcaatcgctaat
aagattaaagagaaacaaggtgacgtcacagaagatgagaccatcaggtttaagtcctac
ttgctgagtatgggaatagccaacccagttacccgggagacctatggctcaggcacgcag
taccacatgcagctggccaaacagctggctggaatattgcaggcaccgttagaggaacgt
gggggaataatgtcgctcacagaggtgtactgtttagtgaaccgagctcgagggatggag
ttgctctcaccagaagatttagtgaatgcatgcaagatgctggaggcgctgaaattgcct
gtcaggcttcgggtttttgacagtggtgtcatggtaattgagcttcaaacccacaaggaa
gaggagatggtggcctcagccctggagacagtttcagaaagaggatctttaacatcagaa
gagtttgccaaacttgtggggatgtctgtcctcctagctaaagaaaggctgcttcttgcc
gagaagatgggccatctttgccgagatgactccgtggaaggcttgcggttttacccaaac
ttatttatgacacagaactaa
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