Chionomys nivalis (European snow vole): 130864325
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Entry
130864325 CDS
T11437
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130864325 (Gapvd1)
Membrane trafficking [BR:
cnl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130864325 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
130864325
NCBI-ProteinID:
XP_057610534
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All DBs
Position
22:complement(49681635..49762404)
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AA seq
1485 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDENYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLTERFSPAQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGTEEGD
PRTKNSLGKFDKSCVAAFLDVVIGGRAVETPPMNSVNLLEGLSRTVVYISYSQLITLVNF
MKSVMSGDELKEDRMALDSLLASLPQAKPGKGSSLDVTPYSTPQMSPAATPANKKNRLPI
GQQLAAITAWDSSATNLTAHIPLVTPFATRSRSRSNMLMDLHMDHEGSSQETIQEVQPEE
VLVISLGTGPQLTPGMMSENEVLNMQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNVDEDRLQEIAGAAAENVLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDDIAHGAHQ
LTSPPSQSESLLAVFDPLSSHDGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPT
FGSHVLTAAEVEAFKQRHSYPERLVRSRSSDVVSSVRRPMSDPSCNRRSGNDELPPAAAT
GATSLVAAPHSSSSSPSKDSSRGEAEERKDSDDERSDRSRPWWRKRFVSAMPKAPIPFRK
KEKQEKDKDDLGPDRFSTLTDEPSPRLSAQTQVAEDILDKYRNAIKRTSPSEGAMANDES
AEVIGDGESAQDSPRDEALQNISADDLPDSASQAAHPQDAAFSYRDVKKKLRLALCSADS
VAFPVLSHSTRNGLPDHTDPEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDN
RTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVC
VRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDA
QLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAP
WPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKA
NPPCLLSTVQYISSFYASCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatatccacactctggcccaccacctcaaacaggagcgcttgtacgtg
agctctgagaaacagctcattcagaggctaaacgcagatgtgctgaagacagctgaaaag
ctgtatcgaacggcgtggattgcaaagcaacagaggattaatttggatcggcttattata
accagtgctgaagcgtcccctgctgagtgttgccagcatgccaagattttggaagataca
cagtttgttgatggatataaacaactgggatttcaggaaacagcttatggagaattcttg
agtcggttaagagaaaatcctcgtcttattgcctcctctttggttgctggagaaaaactc
aatcaagagaacacacaaagcgttatctacacagtttttacctccttgtatggcaactgt
attatgcaagaagatgaaaactacctccttcaggttttacgatacttgattgaatttgaa
ctgaaagaaagtgacaaccccaggcggcttttgaggagaggaacttgtgccttcagcatc
ttatttaaactgttttctgaaggactgttttctgccaaactttttcttacggctacttta
cacgagcccatcatgcagctccttgtggaagatgaagaccatctggaaacagaccctaac
aagctaacggagaggttctccccagcgcagcaggaaaagctctttggagagaaaggctca
gacagattcaggcaaaaggttcaagagatggtggattccaatgaggccaaactggtggct
ttggtgaacaaatttattggttatctcaaacagaacacttactgctttccacatagtctg
aggtggattgtgtcacagatgtacaaaactctctcttgtgtagacagactggaggtcggg
gaagtcagagccatgtgcaccgatcttctgttggcttgcttcatttgtcctgcagttgtc
aatccagagcagtatggaataatatctgatgctcctatcaatgaggtggcgagatttaac
ctgatgcaggttggccgccttctgcagcagttagcaatgactggcaccgaagaaggagat
cctcgaaccaaaaatagccttggaaaatttgacaaaagctgtgtcgctgctttccttgat
gtcgtgattgggggccgcgcagtggagactccaccaatgaactccgttaatcttctggaa
ggcttgagcagaactgtggtttatataagttacagtcagcttattactctggtgaacttt
atgaagagtgtgatgtctggagacgagctgaaggaagatagaatggctcttgacagcttg
ttggcaagcctgccccaggctaagccagggaagggcagcagtctagacgtcaccccctac
agcactcctcagatgtctccagcagccaccccggccaacaaaaagaaccggttacctata
ggacaacagttagcagccatcactgcctgggattcctcagccaccaatcttactgctcat
attcctctagtaaccccgtttgcaactcggagcagaagccgaagtaatatgctaatggac
ttacatatggaccatgaagggtcatctcaagaaaccatccaggaggtacaaccagaagag
gtgctggtcatttccttagggacaggtccccaacttactccagggatgatgtcagaaaat
gaggtcctaaacatgcagctctcggatggaggacaaggagatgtccctgttgatgaaaac
aaactccacggtaaacctgacaaaaccttgcgcttttccctctgcagtgacaatctggaa
ggcatatctgaaggcccttctaatcgctccaattcagtatcttctcttgacctggaagga
gagtctgtgtctgaacttggggctggaccttctgggagtaatggagtagaagccctgcag
ctgctagaacatgagcaagctacaactcaagataatcttgatgataaactgaggaagttt
gagattcgtgacatgatggggctaacagatgatagggacatatcagagacagtgagtgag
acctggagcaccgatgtcctgggaagtgactttgacccgaacgtcgatgaagatcgtttg
caagagattgcaggtgcagcagcagagaatgtgttaggcagtttgctgtgcctcccaggt
tcagggtcagttctccttgacccttgcactggctctaccatatcagagaccacaagtgaa
gcttggagcgtagaggtattgccaagtgactcagaggctccagacttaaagcaggaggag
cggctccaagagcttgagagctgttctggactgggcagcacgtctgatgatacagatgtc
agggaggtcagttcccgccccagcacaccaggcctcagtgttgtgtccggtataagtgct
acatcagaggatattcccaataagattgaagacctgaggtctgagtgcagctctgatttt
gggggtaaagattctgtaactagtccagacatggatgacatagcccatggtgcccaccag
ctgacctctcctccctcgcagtcagagtccctgcttgccgtgtttgacccactgtcttcg
cacgatggggcctctgctgtggtaaggccgaaggttcactatgcccgaccctcgcaccca
cccccggatcctccaatcctggaaggtgcagtgggagggaatgaggccaggctgcccacc
tttggttctcacgttttaaccgcagctgaagtggaggcatttaagcagaggcattcttac
cctgagagactggttcgcagcaggagctctgacgtagtgtcttctgtgcggcggcccatg
agtgaccccagttgcaaccgccgttcagggaatgacgagctccctccagctgcagccact
ggtgctacttctttggtggctgcacctcattcgtcatcttcttctccgagtaaggactct
tcaagaggagaggctgaagagcgcaaggatagtgatgatgagagatcagacaggagcagg
ccttggtggagaaaacgcttcgtgtcagctatgcctaaagctcctataccatttagaaag
aaagaaaaacaagaaaaagacaaagatgatctggggcctgacagattctcaacactcaca
gatgagcccagccctaggctcagtgcacagactcaggttgctgaagatattctggacaaa
tatcggaacgccataaaacggaccagccccagtgaaggagcaatggccaatgacgagagt
gcagaggtcataggtgatggtgaaagtgctcaggactctccccgggatgaagcgctgcag
aacatctctgccgacgacctcccagactctgccagccaagcggcccacccccaggatgct
gctttctcttacagagatgtaaaaaagaagctgaggcttgctctttgctctgcggactcg
gtggcctttccagtgctaagccactcaacaaggaatggactgcctgaccacacagaccca
gaagacaatgaaattgtatgctttttaaaagttcaaatagctgaagcaattaatttacaa
gataagaacttaatggctcaacttcaagaaacaatgcgttgtgtgtgccgctttgacaat
aggacttgtaggaagctgctggcatccattgctgaagactacaggaaaagagccccatat
attgcttatctcacccgctgtcgacaaggactgcagaccacacaggctcacttggaaagg
cttttgcaaagagttttgcgggacaaagaggtggccaatcggtattttaccactgtgtgt
gtacggttactgcttgagagcaaagaaaaaaagatcagggagttcattcaagactttcag
aaacttactgccgctgacgataaaactgctcaagtggaggactttctacagtttctgtat
ggtgcaatggctcaggatgtcatatggcagaacgccagtgaggagcagctgcaggatgcc
cagctggccatcgagcgcagtgtgatgaatcggatcttcaagcttgctttctaccctaac
caggacggggacattctccgtgaccaggttctgcatgaacacatccagagactgtctaaa
gtggtgactgccaaccacagagccctgcagattccagaggtttatcttcgtgaggccccg
tggccgtctgcacagtcagagatcaggacaataagtgcttacaagactccgcgggacaaa
gtgcagtgcatcctgaggatgtgctccaccatcatgaacctccttagtctggccaacgag
gactctgtccctggggcagatgactttgtccctgtgctggtgttcgtgctgataaaggcc
aacccgccctgcctgctgtccactgtgcagtacatcagcagcttctacgccagctgtctg
tctggagaggagtcctactggtggatgcagttcacagccgccgtggagtttattaaaacc
atcgacgacaggaagtga
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