Chionomys nivalis (European snow vole): 130864585
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Entry
130864585 CDS
T11437
Symbol
Scn9a
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
130864585 (Scn9a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnl04040
]
130864585 (Scn9a)
Ion channels [BR:
cnl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130864585 (Scn9a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
130864585
NCBI-ProteinID:
XP_057611168
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All DBs
Position
22:15627847..15697329
Genome browser
AA seq
1987 aa
AA seq
DB search
MAMLPPPGPQSFVYFTKQSLALIEQRISEGKAKEHKDEKKEGDEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYILSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKELEENETLESIMNTVESEEELK
RYFYYLEGTKDALLCGFSTDSGQCPEGYYCVKAGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
LEFQQMLDRLKKEQEEAEAIAAAAAEYTSIGRSRMTGLSESSSETSRLSSKSAKERRNRR
KKKNQKKISSGEEKGDDEKLSKSGSEESIRKKSFHLGVEGHHRSREKRLSTPNQSPLSIR
GSLFSARRSSRTSLFSFKGRGRDLGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSS
NISQASRSPQMLSVNGKMHSAVDCNGVVSLVDGPTALMVPNGQLLPEVIIDKATSDDSGT
TNQMRKKRLSSSYFLSEDMLNDPHLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHT
FLIWNCSPYWIKFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLVVGN
LIFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIN
EDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVIGNLVVL
NLFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKRGINYVKRTLREFLLKSFSKKPKG
SKDTKRAVDPNNRKDNYISNRTLAEMSKDHNFHKEKDKLSGFGSSIDKSFVDDNDYQSFI
HNPSLTVTVPIAPGESDLENMNTEELSSDSDSDYSKERRNRSSSSECSTVDNPLPGEEEA
EAEPINPDEPEACFTDGCVRRFPCCQVNIDSGKGKVWWTIRKTCYRIVEHSWFESFIVLM
ILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWL
DFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGSRFPTAQVANRSECFALMNVSGNVR
WKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNEQPKYEYNLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPG
NKFQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQSDYMTDVLYWINVVFIILFTGE
CVLKLISLRHYYFTVGWNIFDFVVVILSIVGMFLANMIEKYFVSPTLFRVIRLARIGRIL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNF
ETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKIHPGSSVEGDCGNPSVGIFYFV
SYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCK
LSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRS
QMEERFMSANPSKVSYEPITTTLKRKQEEVSATIIQRAYRRYRLRQNVKNISSIYMKDGD
RDDDLPNKEDIVFDNVIENSSPEKTDATASAVSPPSYDSVTKPDQEKYETDKTEKEDKGK
DGKESGE
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgctgcctcccccaggaccgcagagctttgtctacttcaccaaacagtctctc
gccctcattgagcagcgcatttcggaaggaaaagccaaggaacacaaagacgaaaagaaa
gaaggtgatgaagaaggtcccaagcccagcagcgacttggaagctggtaaacagctgccc
ttcatctatggagacattccccctgggatggtgtcggagcccctggaggacctggacccc
tactacgcagacaagaaaacttttatagtattgaacaaaggaaaagcgatcttccgcttc
aacgccacgcctgcgctgtacatactgtcacccttcagtcctctaagaagaatatctatt
aagattttagtgcattccttattcagcatgctgatcatgtgcacaattctgacgaactgc
atattcatgaccatgagcaaccctccagaatggaccaaaaatgtagaatacacttttact
ggaatatatacttttgaatcactcataaaaatccttgcaagaggcttttgcgtgggagaa
ttcaccttccttcgtgacccttggaactggctggattttattgtcattgttttcgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgtaatcccaggactgaagaccatcgtgggggccttgatccag
tcagtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagtgtttttgca
ttaattggactacagctgtttatgggaaacctaaagcataaatgtttcaggaaggaactc
gaagagaatgaaacattagaaagcatcatgaataccgttgagagtgaagaagaactgaaa
agatatttttattacttggagggaaccaaagatgctctcctttgtggcttcagcacagat
tctggccagtgtccagaaggatactactgtgtgaaggctggcagaaatcccgattacggc
tacacgagctttgatactttcagctgggccttcttggccttgtttcggctaatgactcag
gattactgggagaacctttaccagcagactctacgtgctgctggcaaaacctacatgatt
ttctttgtcgtggtgatcttcctgggctccttttatctgataaacttgatcctggctgtg
gtagccatggcctatgaggaacagaaccaggccaacatcgaggaagctaaacagaaagaa
ttagaatttcagcagatgttagatcgactcaagaaagagcaggaagaagctgaggccatt
gctgcagctgcagctgagtacacgagtattgggcggagcaggatgacgggtctgtcggag
agctcttcagaaacctctcggctgagctccaagagtgctaaggagagacgaaacagaaga
aagaaaaagaaccagaagaagatctccagtggcgaggaaaagggcgacgatgagaaactg
tccaagtcgggatcggaggaaagcatccgaaagaaaagcttccatctcggcgtggaagga
catcaccgctcccgggagaagaggctgtccaccccgaaccagtcaccactcagcattcgc
ggctccttgttttctgcacggcgcagcagtcgtacgagtctcttcagtttcaagggtcga
ggaagagatctcggatctgagacagagttcgccgatgacgagcatagcatttttggagac
aacgagagcagacggggttcactatttgtgcctcacaggcctcgggagcgacgaagcagt
aacatcagccaggccagtaggtctccacaaatgctgtcggtgaatggaaaaatgcacagt
gcggtggattgcaatggcgtggtgtcgcttgttgatggacctacagccctcatggtcccc
aatggacagcttcttccagaggtgataatagataaggcaacttctgacgacagtggcaca
accaatcaaatgcgcaagaaaagactttccagttcttatttcctgtctgaggacatgctg
aatgacccacatctcaggcagagagccatgagcagagcaagcattctaaccaacactgta
gaagaacttgaagagtctagacaaaaatgtccaccatggtggtacagatttgctcacaca
tttttgatctggaattgctctccatattggataaaattcaagaagttcatccattttatt
gttatggatccttttgtagatcttgcaattaccatttgcatagttctaaacacattgttt
atggctatggaacaccacccaatgactgacgaattcaaaaatgtacttgtcgtggggaat
ctgatcttcacagggatctttgcagctgaaatggtactgaagttaatagctatggatcct
tatgagtatttccaagtagggtggaatatttttgacagtctaattgtgacattgagtttg
gtagagcttttcctcgcagatgtggaaggattatcagtcctgagatcattccgattgctc
cgagtcttcaagttggcaaaatcctggcccacactgaacatgctcatcaagatcatcggc
aactcggtgggcgccctgggcaacctgaccctggtgttggccatcatcgtcttcatcttc
gccgtggtcggcatgcagctgtttggaaagagctacaaggagtgcgtctgcaagatcaac
gaggattgcacactcccgcgctggcacatgaatgacttcttccactccttcctgatcgtg
ttccgtgtgctgtgtggagagtggatagagaccatgtgggattgcatggaggtcgcgggc
cagaccatgtgtctcactgtcttcatgatggtcatggtgattggcaacctcgtggtcctg
aacctgtttctggctttattactgagctcctttagttctgacaatcttacagcaattgaa
gaagacactgatgcaaacaacctccagatcgcagtggccaggatcaaaagaggaataaat
tatgtgaaacggaccctacgtgaatttctcctaaaatcattttccaaaaaaccaaagggt
tccaaggacacaaagcgagcagtagatccaaacaacagaaaagacaactatatctcaaat
cggactctcgctgagatgagcaaagatcacaatttccacaaagaaaaggataaactgagt
ggttttgggagcagtatagacaaaagctttgtggatgacaatgattaccagtcctttatt
cataatcccagcctcacggtgactgtgccaattgcacctggggaatctgatttggaaaac
atgaatactgaagaacttagtagtgactcagatagcgactacagcaaagagagacggaac
cgatccagttcctctgagtgcagcacagtggataaccctctgccaggagaagaagaagca
gaagctgagcccataaatccagatgagccagaggcatgttttacggatggttgtgtgcgg
agatttccatgctgccaagtgaatatagactctgggaaagggaaagtctggtggaccatc
aggaagacctgctacaggatagttgaacacagctggttcgaaagctttatcgttcttatg
atcttgctcagcagcggagctctggcttttgaagacatatacattgaaaagaaaaagacc
attaagattattttggagtatgctgacaagatcttcacctacatcttcatcctggagatg
cttctcaaatgggtggcctatggctataaaacatatttcaccaatgcctggtgttggctg
gacttcttaattgttgatgtatcactggttactttagtagccaacactcttggctactca
gaccttggccccattaaatccctgaggacactgagggctctaagacccctgagagccttg
tctagatttgaaggaatgagggtggtggtgaatgcactcataggagcaatcccttccatc
atgaatgtgcttctcgtatgtcttatattctggctaatatttagcatcatgggagtcaat
ctgtttgctggcaagttctacgagtgtgttaacactacagatggctcacgatttcccaca
gctcaagttgcaaatcgttctgagtgctttgcccttatgaatgtcagtggaaatgtccga
tggaaaaacctgaaagtgaactttgataacgttgggctcggctacctatctctgcttcaa
gttgcaacatttaaaggctggatggatattatgtatgctgctgttgactctgttaatgta
aatgagcagccaaaatatgaatacaacctctacatgtatatttattttgtcatctttatc
atctttgggtcgttcttcactttgaatctgttcattggtgtcatcatagacaacttcaac
caacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaagtac
tataatgcaatgaagaagctgggatccaagaaaccacaaaagccaattcctaggccaggg
aacaaattccaaggatgtatatttgacttagtgacaaatcaagcttttgatatcaccatc
atggtcctcatttgcctcaacatggtaaccatgatggtagaaaaagaagggcaaagtgat
tacatgactgatgttttgtactggatcaacgtggtcttcattatcctgttcactggagag
tgcgtgctgaagctcatctccctccgacattactacttcactgtgggatggaacattttt
gattttgtggtagtgatcctctccattgtaggaatgtttctcgccaacatgatagagaag
tactttgtgtcccctaccctgttccgagtcatccgcctggccaggattggccgaatccta
cgtctgatcaaaggcgccaagggcatccgcacgctgctcttcgctctgatgatgtccctt
cctgcgctgttcaacatcggcctcctgcttttcctggtcatgttcatctacgccatcttt
gggatgtccaactttgcctatgttaaaaaagaagctggcattaacgacatgttcaacttt
gagacctttggcaacagcatgatctgcttattccaaatcaccacctcggcaggctgggat
ggactgctggcccccatcctcaatagtgcacctcccgactgtgatcccaaaaaaattcac
ccaggaagttcagtggaaggggactgtgggaacccatctgtggggattttctactttgtc
agctacatcatcatatccttcctggttgtggtgaacatgtacatcgctgtcatcctggag
aacttcagcgttgccacagaagaaagtactgaacccctaagtgaggacgactttgagatg
ttctatgaggtctgggagaagttcgaccccgatgccactcagttcatagagttctgcaag
ctctccgactttgcggctgccctggatcctccccttctcatcgcaaagccaaacaaagtc
cagctcattgccatggatctgcccatggtgagcggagaccgcatccactgcctggacatc
ttatttgcttttacaaagagggttttgggtgagagtggagagatggattctcttcgttca
cagatggaagaaaggtttatgtccgcaaatccttctaaagtgtcctatgaacccatcaca
accacactaaaacgaaaacaagaggaagtatctgctactatcattcagcgcgcttacaga
aggtaccgccttcggcaaaacgtcaagaatatatcaagtatatacatgaaagatggagac
agggatgatgacttgcccaataaagaagatatagtttttgataacgttattgagaactca
agtccagaaaagacagacgcaactgcctctgccgtctctccaccttcatatgacagtgtc
actaagccagatcaagagaaatatgagacagacaaaacagaaaaggaagacaaaggcaaa
gatgggaaagaaagcggggaatag
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