Chionomys nivalis (European snow vole): 130864634
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Entry
130864634 CDS
T11437
Symbol
Spopl
Name
(RefSeq) speckle-type POZ protein-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130864634 (Spopl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnl04121
]
130864634 (Spopl)
Ubiquitin system [BR:
cnl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
130864634 (Spopl)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
130864634
NCBI-ProteinID:
XP_057611276
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Position
22:complement(38188960..38245578)
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AA seq
424 aa
AA seq
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MSMEPTPSLSGDMSPSPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEHLHTACRRGGSIALPSLENW
HLPLHCKWCCRQVSVVQDSVNVSGYTNTNTLKVPECRLAEDLGNLWENTRFTDCCFFVRG
KEFKAHKSVLAARSPVFSAMFEHEMEECKKNRVEINDLDPEVFKEMMRFVYTGKAPNLDK
MADNLLAAADKYALERLKVMCEEALCSSLSVENVADTLVLADLHSAEQLKAQAIDFINRC
SVLRQLGCKDGKNWNNNQATDIMETPGWKSMIQSHPHLVAEAFRALASAQCPQFGIPRKR
LKQS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggaacctactccatctctgtctggagatatgtctcctagccctgttgcagaa
agctggtgttatacacaggttaaagtagtgaaattttcctacatgtggactattaataac
ttcagtttttgtcgagaagaaatgggtgaagtgttaaagagttcaacattttcttctggc
ccaaatgataaaatgaaatggtgcctgagggtaaacccaaaggggttagatgatgaaagt
aaagactacttgtccttatatttgctcttagtcagctgcccaaaaagtgaggttcgagca
aaattcaaattttcccttctgaatgctaaaagggaagaaacaaaagcaatggaaagccaa
agagcttatcgatttgtgcaggggaaagactggggatttaaaaaattcattagaagggat
tttttgcttgatgaagccaatggtctcttgccagatgacaagcttacgttattctgtgag
catctccacactgcttgcagaagaggaggaagcattgcactgccctccctagagaactgg
cacctccccctccactgcaagtggtgctgtagacaggtgagtgtggttcaggattcagta
aatgtatcaggatatactaatacaaacactttgaaggtaccagaatgtcgactagcagaa
gacttaggtaatctctgggaaaacacaagatttacagattgctgcttttttgtgagagga
aaagaattcaaagctcataagtctgtgcttgcagctcgatctccagttttcagtgcaatg
tttgaacatgaaatggaagaatgcaaaaagaatcgcgtggaaataaatgatttagaccct
gaagtttttaaagaaatgatgagattcgtttacacaggaaaagcaccaaatcttgataaa
atggctgacaacttgttggcagctgcagacaaatatgcactggaacggctgaaggtcatg
tgtgaagaagctttgtgtagtagcctctcagtagaaaatgttgctgatacccttgtcctt
gcagatttgcacagtgcagaacagttgaaagcccaggcaatagactttattaatagatgc
agtgtacttcgacaacttggatgtaaggatgggaaaaactggaataacaaccaagcaact
gacattatggaaacaccagggtggaagtccatgattcagtctcatcctcatttagtggca
gaagccttccgagcactagcatctgcacagtgtccacagtttggaattccacgcaagcgg
ctaaagcagtcttga
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